Cow genome map

Conread name: Thy1-THY010006F10

Conread position: 5-233
Cow position: chr27:26816063-26816283 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 147, 50

Conread position: 9-230
Cow position: chr27:17995219-17994996 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 154
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 40

Conread position: 11-207
Cow position: chr27:13875458-13875657 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 29, 179

Conread position: 14-238
Cow position: chr27:25809784-25809564 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 112, 15

Conread position: 15-230
Cow position: chr27:7649857-7649634 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 89, 13

Conread position: 15-238
Cow position: chr27:26920195-26919956 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 166
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 214

Conread position: 20-231
Cow position: chr27:19508748-19508961 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 25, 87

Conread position: 23-238
Cow position: chr27:1637184-1636980 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 136, 6

Conread position: 26-203
Cow position: chr27:2036468-2036641 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 19, 44

Conread position: 26-238
Cow position: chr27:22439879-22440097 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 19, 96

Conread position: 27-199
Cow position: chr27:12948052-12947877 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 76, 15

Conread position: 27-222
Cow position: chr27:31157769-31157969 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 96, 63

Conread position: 27-238
Cow position: chr27:299630-299426 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 76, 70

Conread position: 27-240
Cow position: chr27:28518040-28518253 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 77, 22

Conread position: 28-196
Cow position: chr27:16505161-16504996 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 130, 85

Conread position: 28-199
Cow position: chr27:19779622-19779794 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 76, 38

Conread position: 28-215
Cow position: chr27:26885764-26885576 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 119, 22

Conread position: 28-219
Cow position: chr27:23994670-23994475 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 75, 173

Conread position: 28-221
Cow position: chr27:30444927-30444738 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 131, 14

Conread position: 28-232
Cow position: chr27:23527056-23527262 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 14, 134

Conread position: 28-238
Cow position: chr27:22550024-22549811 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 40, 14

Conread position: 28-240
Cow position: chr27:9977431-9977640 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 119, 46

Conread position: 29-144
Cow position: chr27:31479020-31479137 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 29-148
Cow position: chr27:6751923-6752044 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 29-182
Cow position: chr27:26467815-26467658 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 74, 0

Conread position: 29-185
Cow position: chr27:21054204-21054363 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 74, 13

Conread position: 29-185
Cow position: chr27:27012440-27012602 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 29-199
Cow position: chr27:19074279-19074105 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 8, 102

Conread position: 29-199
Cow position: chr27:29877729-29877556 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 74, 13

Conread position: 29-202
Cow position: chr27:12515939-12516114 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 16, 62

Conread position: 29-205
Cow position: chr27:10581280-10581456 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 74, 85

Conread position: 29-206
Cow position: chr27:23069848-23070018 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 29-207
Cow position: chr27:20490272-20490456 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 75, 11

Conread position: 29-208
Cow position: chr27:19991893-19992080 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 14, 73

Conread position: 29-225
Cow position: chr27:11208812-11208612 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 8, 188

Conread position: 29-225
Cow position: chr27:15350606-15350404 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 29-225
Cow position: chr27:29249329-29249534 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 159
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 11, 61

Conread position: 29-227
Cow position: chr27:17397705-17397510 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 130, 72

Conread position: 29-228
Cow position: chr27:31498530-31498724 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 75, 22

Conread position: 29-230
Cow position: chr27:5744602-5744812 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 10

Conread position: 29-230
Cow position: chr27:28015988-28015788 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 157
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 74, 13

Conread position: 29-232
Cow position: chr27:6550206-6550412 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 68, 22

Conread position: 29-232
Cow position: chr27:11133834-11134035 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 130, 78

Conread position: 29-232
Cow position: chr27:11323073-11323279 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 74, 186

Conread position: 29-232
Cow position: chr27:16704995-16705200 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 10, 75

Conread position: 29-232
Cow position: chr27:20637312-20637112 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 77, 89

Conread position: 29-232
Cow position: chr27:21978397-21978186 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 163
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 74, 192

Conread position: 29-232
Cow position: chr27:23507392-23507601 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 189

Conread position: 29-232
Cow position: chr27:26883515-26883307 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 18, 34

Conread position: 29-232
Cow position: chr27:28002057-28001863 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 133, 71

Conread position: 29-234
Cow position: chr27:21677684-21677474 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 75, 190

Conread position: 29-234
Cow position: chr27:26794040-26793832 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 159
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 12, 188

Conread position: 29-234
Cow position: chr27:28253982-28254189 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 70, 148

Conread position: 29-236
Cow position: chr27:20045644-20045845 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 75, 10

Conread position: 29-236
Cow position: chr27:28922148-28921939 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 162
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 76, 13

Conread position: 29-237
Cow position: chr27:4944761-4944560 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 11, 73

Conread position: 29-238
Cow position: chr27:10307556-10307345 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 74, 13

Conread position: 29-238
Cow position: chr27:10404371-10404161 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 74, 186

Conread position: 29-238
Cow position: chr27:16246553-16246762 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 28

Conread position: 29-238
Cow position: chr27:26509410-26509202 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 73, 146

Conread position: 29-238
Cow position: chr27:27554933-27554725 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 142
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 74, 26

Conread position: 29-238
Cow position: chr27:29816882-29816665 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 75, 13

Conread position: 29-238
Cow position: chr27:29991712-29991492 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 74, 10

Conread position: 29-242
Cow position: chr27:23484962-23485168 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 74, 42

Conread position: 29-243
Cow position: chr27:10394717-10394912 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 75, 10

Conread position: 29-243
Cow position: chr27:28932056-28931842 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 169
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 74, 98

Conread position: 29-248
Cow position: chr27:29308090-29308309 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 75, 13

Conread position: 30-231
Cow position: chr27:16103558-16103755 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 73, 84

Conread position: 30-232
Cow position: chr27:11480892-11480687 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 8, 186

Conread position: 30-236
Cow position: chr27:23859910-23860114 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 74, 181

Conread position: 30-238
Cow position: chr27:30764780-30764986 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 73, 138

Conread position: 30-250
Cow position: chr27:29892469-29892692 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 73, 186

Conread position: 32-200
Cow position: chr27:178612-178781 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 120
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 71, 92

Conread position: 32-206
Cow position: chr27:12596530-12596701 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 69

Conread position: 32-222
Cow position: chr27:9956685-9956492 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 135
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 71, 184

Conread position: 32-232
Cow position: chr27:6499805-6500010 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 183

Conread position: 32-238
Cow position: chr27:24331463-24331675 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 71, 189

Conread position: 33-195
Cow position: chr27:26624956-26625122 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 7, 55

Conread position: 33-216
Cow position: chr27:26983913-26984096 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 81

Conread position: 34-171
Cow position: chr27:31373221-31373080 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 34-231
Cow position: chr27:29613736-29613540 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 70, 28

Conread position: 34-232
Cow position: chr27:18507396-18507599 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 37, 184

Conread position: 34-238
Cow position: chr27:10323595-10323792 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 69, 60

Conread position: 35-210
Cow position: chr27:1674543-1674375 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 129, 38

Conread position: 35-226
Cow position: chr27:19669053-19668864 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 133
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 68, 131

Conread position: 35-231
Cow position: chr27:15003227-15003030 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 139
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 68, 89

Conread position: 35-234
Cow position: chr27:20749250-20749063 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 105, 65

Conread position: 36-238
Cow position: chr27:18543740-18543947 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 10, 99

Conread position: 37-232
Cow position: chr27:18791759-18791560 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 159
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 67, 5

Conread position: 38-238
Cow position: chr27:26121511-26121715 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 9, 90

Conread position: 39-202
Cow position: chr27:20081375-20081208 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 60, 103

Conread position: 39-205
Cow position: chr27:22171058-22171223 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 120, 83

Conread position: 39-206
Cow position: chr27:591012-590838 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 65, 12

Conread position: 39-210
Cow position: chr27:27450128-27449957 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 10, 70

Conread position: 39-233
Cow position: chr27:29693223-29693428 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 62, 184

Conread position: 39-237
Cow position: chr27:27740537-27740337 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 64, 137

Conread position: 39-238
Cow position: chr27:19660682-19660887 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 8, 180

Conread position: 39-238
Cow position: chr27:23147920-23148121 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 59, 27

Conread position: 39-238
Cow position: chr27:28896632-28896837 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 8, 181

Conread position: 40-230
Cow position: chr27:26173255-26173443 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 61, 143

Conread position: 40-232
Cow position: chr27:15865367-15865556 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 112, 67

Conread position: 40-236
Cow position: chr27:6162646-6162457 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 112, 53

Conread position: 40-238
Cow position: chr27:18435373-18435178 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 118, 51

Conread position: 42-202
Cow position: chr27:29614801-29614962 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 117, 65

Conread position: 42-210
Cow position: chr27:11145641-11145807 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 61, 83

Conread position: 42-215
Cow position: chr27:26980206-26980029 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 62, 0

Conread position: 42-221
Cow position: chr27:9504312-9504491 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 61, 163

Conread position: 42-222
Cow position: chr27:18491326-18491495 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 62, 22

Conread position: 42-222
Cow position: chr27:20266467-20266286 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 62, 32

Conread position: 42-226
Cow position: chr27:19557152-19557331 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 113, 19

Conread position: 42-228
Cow position: chr27:7412152-7412338 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 10, 74

Conread position: 42-229
Cow position: chr27:26118256-26118446 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 152
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 61, 173

Conread position: 42-230
Cow position: chr27:10598746-10598936 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 173

Conread position: 42-231
Cow position: chr27:426729-426917 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 61, 81

Conread position: 42-231
Cow position: chr27:19576564-19576375 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 22, 60

Conread position: 42-231
Cow position: chr27:23452222-23452409 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 117, 52

Conread position: 42-232
Cow position: chr27:23128224-23128409 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 61, 107

Conread position: 42-232
Cow position: chr27:26226529-26226341 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 62, 81

Conread position: 42-237
Cow position: chr27:18688653-18688455 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 62, 174

Conread position: 42-238
Cow position: chr27:4414056-4413863 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 117, 11

Conread position: 42-238
Cow position: chr27:7346429-7346627 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 140
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 51, 172

Conread position: 42-238
Cow position: chr27:11435568-11435367 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 62, 176

Conread position: 42-238
Cow position: chr27:11982889-11982691 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 155
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 62, 139

Conread position: 42-238
Cow position: chr27:15315282-15315472 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 62, 31

Conread position: 42-238
Cow position: chr27:16786590-16786784 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 116, 65

Conread position: 42-238
Cow position: chr27:18558117-18558312 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 155
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 61, 160

Conread position: 42-238
Cow position: chr27:19500477-19500278 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 61, 174

Conread position: 42-238
Cow position: chr27:27438749-27438549 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 61, 156

Conread position: 42-238
Cow position: chr27:30868992-30868785 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 159
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 62, 182

Conread position: 42-240
Cow position: chr27:26112159-26111959 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 158
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 62, 175

Conread position: 42-241
Cow position: chr27:20484492-20484688 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 105, 65

Conread position: 42-243
Cow position: chr27:6330393-6330598 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 141
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 58, 175

Conread position: 43-167
Cow position: chr27:19653817-19653686 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 43-182
Cow position: chr27:30441462-30441605 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 61, 40

Conread position: 43-195
Cow position: chr27:23760218-23760068 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 115, 57

Conread position: 43-201
Cow position: chr27:29246384-29246228 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 116, 18

Conread position: 43-202
Cow position: chr27:20612281-20612444 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 60, 87

Conread position: 43-206
Cow position: chr27:18873813-18873972 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 116, 18

Conread position: 43-222
Cow position: chr27:11454412-11454230 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 128
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 61, 172

Conread position: 43-222
Cow position: chr27:21201950-21202132 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 61, 172

Conread position: 43-226
Cow position: chr27:16965335-16965522 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 109, 174

Conread position: 43-226
Cow position: chr27:27020335-27020154 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 35

Conread position: 43-226
Cow position: chr27:31157570-31157755 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 60, 173

Conread position: 43-227
Cow position: chr27:18752607-18752800 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 57, 145

Conread position: 43-227
Cow position: chr27:20048397-20048578 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 145
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 116, 57

Conread position: 43-229
Cow position: chr27:26245786-26245601 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 60, 163

Conread position: 43-229
Cow position: chr27:29458090-29458290 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 60, 68

Conread position: 43-230
Cow position: chr27:12658593-12658401 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 174

Conread position: 43-230
Cow position: chr27:18882417-18882599 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 116, 29

Conread position: 43-232
Cow position: chr27:5553232-5553418 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 150
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 61, 18

Conread position: 43-232
Cow position: chr27:10979620-10979812 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 153
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 61, 172

Conread position: 43-232
Cow position: chr27:11507504-11507314 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 61, 90

Conread position: 43-232
Cow position: chr27:13801565-13801758 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 154
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 61, 45

Conread position: 43-232
Cow position: chr27:13940790-13940608 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 62, 31

Conread position: 43-232
Cow position: chr27:19483342-19483152 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 134
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 61, 32

Conread position: 43-232
Cow position: chr27:20078625-20078813 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 25, 18

Conread position: 43-232
Cow position: chr27:20327257-20327449 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 174

Conread position: 43-232
Cow position: chr27:20653498-20653306 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 172

Conread position: 43-232
Cow position: chr27:20719045-20719237 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 172

Conread position: 43-232
Cow position: chr27:22401243-22401435 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 60, 172

Conread position: 43-232
Cow position: chr27:26400957-26400772 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 116, 71

Conread position: 43-235
Cow position: chr27:6924842-6925037 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 62, 173

Conread position: 43-237
Cow position: chr27:2592297-2592497 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 162
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 61, 177

Conread position: 43-237
Cow position: chr27:8062592-8062396 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 156
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 6, 87

Conread position: 43-237
Cow position: chr27:19932826-19933023 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 64, 174

Conread position: 43-237
Cow position: chr27:31170312-31170110 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 60, 161

Conread position: 43-238
Cow position: chr27:1353341-1353538 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 157
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 58, 10

Conread position: 43-238
Cow position: chr27:19681709-19681907 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 51

Conread position: 43-238
Cow position: chr27:20514585-20514774 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 61, 23

Conread position: 43-238
Cow position: chr27:24303703-24303902 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 159
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 61, 26

Conread position: 43-238
Cow position: chr27:26437360-26437166 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 61, 82

Conread position: 43-242
Cow position: chr27:4390497-4390296 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 61, 31

Conread position: 43-245
Cow position: chr27:30483544-30483335 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 178

Conread position: 43-383
Cow position: chr27:29236318-29236656 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 227
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 61, 29

Conread position: 44-191
Cow position: chr27:21101531-21101381 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 59, 91

Conread position: 44-193
Cow position: chr27:26154078-26154232 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 44-207
Cow position: chr27:262097-262262 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 110

Conread position: 44-219
Cow position: chr27:23232673-23232853 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 44-222
Cow position: chr27:21951219-21951039 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 144
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 60, 85

Conread position: 44-228
Cow position: chr27:11561536-11561721 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 60, 22

Conread position: 44-230
Cow position: chr27:3518263-3518452 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 60, 172

Conread position: 44-230
Cow position: chr27:29388433-29388619 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 111, 57

Conread position: 44-232
Cow position: chr27:31248845-31248664 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 60, 70

Conread position: 44-236
Cow position: chr27:6679616-6679421 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 39

Conread position: 44-236
Cow position: chr27:12425049-12425243 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 60, 181

Conread position: 44-237
Cow position: chr27:17102661-17102850 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 106, 56

Conread position: 44-238
Cow position: chr27:8790981-8790786 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 50

Conread position: 44-238
Cow position: chr27:20548571-20548766 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 59, 84

Conread position: 44-238
Cow position: chr27:20584706-20584501 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 158
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 53, 135

Conread position: 44-238
Cow position: chr27:25151850-25152040 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 59, 126

Conread position: 44-238
Cow position: chr27:26481436-26481240 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 155
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 43, 141

Conread position: 44-238
Cow position: chr27:29319166-29319366 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 20, 101

Conread position: 44-241
Cow position: chr27:26565556-26565746 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 59, 90

Conread position: 44-243
Cow position: chr27:15867154-15867350 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 108, 55

Conread position: 44-245
Cow position: chr27:5539931-5539733 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 141
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 115, 59

Conread position: 45-230
Cow position: chr27:30872295-30872110 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 107, 58

Conread position: 45-232
Cow position: chr27:30914769-30914958 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 151
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 59, 168

Conread position: 45-234
Cow position: chr27:26852820-26852631 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 56, 145

Conread position: 45-237
Cow position: chr27:20354362-20354544 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 58, 84

Conread position: 45-238
Cow position: chr27:6541397-6541587 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 102, 55

Conread position: 46-199
Cow position: chr27:25000204-25000043 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 46-207
Cow position: chr27:11528692-11528856 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 101, 0

Conread position: 46-230
Cow position: chr27:30455756-30455941 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 104, 62

Conread position: 46-231
Cow position: chr27:26323205-26323397 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 57, 171

Conread position: 46-232
Cow position: chr27:11994105-11993917 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 7, 48

Conread position: 46-232
Cow position: chr27:22489036-22489226 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 58, 6

Conread position: 46-232
Cow position: chr27:27648552-27648368 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 58, 76

Conread position: 46-234
Cow position: chr27:13411605-13411417 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 46, 71

Conread position: 48-232
Cow position: chr27:1184408-1184228 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 56, 18

Conread position: 48-236
Cow position: chr27:19452764-19452955 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 56, 87

Conread position: 49-232
Cow position: chr27:232317-232503 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 150
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 55, 166

Conread position: 49-235
Cow position: chr27:26909822-26909640 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 146
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 103, 52

Conread position: 49-238
Cow position: chr27:2644332-2644135 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 54, 172

Conread position: 50-196
Cow position: chr27:26317833-26317980 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 54, 16

Conread position: 50-232
Cow position: chr27:27058638-27058454 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 165

Conread position: 50-238
Cow position: chr27:29831941-29831742 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 54, 175

Conread position: 51-238
Cow position: chr27:7959063-7958875 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 74, 49

Conread position: 51-238
Cow position: chr27:27558737-27558549 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 55, 135

Conread position: 51-259
Cow position: chr27:26314357-26314146 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 146
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 52, 153

Conread position: 52-210
Cow position: chr27:26175897-26175740 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 38

Conread position: 52-217
Cow position: chr27:23177543-23177377 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 52, 74

Conread position: 52-222
Cow position: chr27:30997060-30996889 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 34

Conread position: 52-232
Cow position: chr27:22735825-22735642 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 129
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 52, 163

Conread position: 52-238
Cow position: chr27:23554560-23554374 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 151
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 51, 135

Conread position: 52-243
Cow position: chr27:26490136-26489948 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 107, 49

Conread position: 53-231
Cow position: chr27:6319693-6319867 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 94, 47

Conread position: 53-237
Cow position: chr27:13318207-13318020 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 51, 163

Conread position: 53-238
Cow position: chr27:26188597-26188784 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 51, 159

Conread position: 54-200
Cow position: chr27:23930866-23930719 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 50, 126

Conread position: 54-232
Cow position: chr27:1190705-1190524 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 50, 159

Conread position: 54-232
Cow position: chr27:26236099-26236275 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 50, 114

Conread position: 54-238
Cow position: chr27:10653453-10653640 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 163

Conread position: 54-245
Cow position: chr27:24731267-24731077 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 50, 114

Conread position: 56-238
Cow position: chr27:24755764-24755943 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 99, 51

Conread position: 66-215
Cow position: chr27:17908478-17908326 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 125
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 109

Conread position: 66-222
Cow position: chr27:23060333-23060174 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 129
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 38, 151

Conread position: 66-234
Cow position: chr27:24709337-24709508 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 150

Conread position: 66-238
Cow position: chr27:15332505-15332340 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 37, 70

Conread position: 67-232
Cow position: chr27:17472602-17472757 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 85, 22

Conread position: 72-215
Cow position: chr27:16231151-16231002 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 72-237
Cow position: chr27:1768833-1768670 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 52

Conread position: 77-237
Cow position: chr27:27747674-27747511 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 27, 139

Conread position: 79-230
Cow position: chr27:15866015-15866166 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 24, 55

Conread position: 85-238
Cow position: chr27:30261093-30260934 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 93-236
Cow position: chr27:7973984-7974130 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 34

Conread position: 94-232
Cow position: chr27:20803849-20803710 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 58, 39

Conread position: 102-238
Cow position: chr27:17918494-17918358 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 24

Conread position: 102-238
Cow position: chr27:17918898-17918762 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 24

Conread position: 104-238
Cow position: chr27:14957906-14957774 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 36

Conread position: 105-231
Cow position: chr27:29658894-29658767 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 29, 109

Conread position: 105-238
Cow position: chr27:4386241-4386106 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 54, 111

Conread position: 105-238
Cow position: chr27:22723874-22723738 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 22, 112

Conread position: 105-245
Cow position: chr27:28467628-28467489 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 50, 105

Conread position: 106-232
Cow position: chr27:27641189-27641063 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 39, 82

Conread position: 106-238
Cow position: chr27:23877023-23876896 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 108-233
Cow position: chr27:1789317-1789188 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 106

Conread position: 109-232
Cow position: chr27:30665252-30665127 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 106

Conread position: 115-236
Cow position: chr27:14675185-14675062 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 100

Conread position: 121-239
Cow position: chr27:26413418-26413298 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 94

Conread position: 338-477
Cow position: chr27:9169615-9169482 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 338-480
Cow position: chr27:28518319-28518451 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 338-510
Cow position: chr27:732599-732769 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 154, 69

Conread position: 339-480
Cow position: chr27:18434445-18434305 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 118
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 111, 46

Conread position: 339-511
Cow position: chr27:2012071-2011904 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 143, 12

Conread position: 340-480
Cow position: chr27:6500090-6500230 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 340-480
Cow position: chr27:28931762-28931622 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 340-502
Cow position: chr27:28921865-28921707 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 142, 30

Conread position: 341-478
Cow position: chr27:4812847-4812713 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 341-516
Cow position: chr27:19546473-19546300 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 96, 44

Conread position: 343-478
Cow position: chr27:2957436-2957571 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 83, 43

Conread position: 343-478
Cow position: chr27:21419034-21418903 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 96, 0

Conread position: 343-478
Cow position: chr27:27040640-27040771 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 343-479
Cow position: chr27:17397416-17397282 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 343-479
Cow position: chr27:29250911-29251044 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 343-480
Cow position: chr27:9090768-9090636 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 343-480
Cow position: chr27:12429435-12429574 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 95, 0

Conread position: 343-480
Cow position: chr27:16620023-16620157 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 343-480
Cow position: chr27:20592016-20592149 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 85, 0

Conread position: 343-480
Cow position: chr27:24227763-24227628 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 60

Conread position: 343-480
Cow position: chr27:27020068-27019935 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 343-480
Cow position: chr27:27259643-27259774 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 343-480
Cow position: chr27:27640967-27640826 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 343-480
Cow position: chr27:28038306-28038172 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 343-480
Cow position: chr27:29399850-29399984 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 113, 42

Conread position: 343-480
Cow position: chr27:29831655-29831521 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 72, 0

Conread position: 343-480
Cow position: chr27:30988831-30988963 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 343-507
Cow position: chr27:13875766-13875927 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 343-507
Cow position: chr27:30354308-30354150 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 150, 39

Conread position: 343-512
Cow position: chr27:18031028-18030859 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 343-516
Cow position: chr27:24331756-24331930 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 40, 73

Conread position: 343-562
Cow position: chr27:13252041-13252254 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 345-474
Cow position: chr27:26509124-26508997 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 345-478
Cow position: chr27:27438471-27438341 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 103

Conread position: 345-480
Cow position: chr27:6058534-6058668 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 345-480
Cow position: chr27:12516228-12516364 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 83

Conread position: 345-480
Cow position: chr27:14902615-14902483 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 345-480
Cow position: chr27:21408524-21408387 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 345-480
Cow position: chr27:23554293-23554154 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 345-480
Cow position: chr27:26428096-26427963 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 345-516
Cow position: chr27:18593304-18593472 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 149, 37

Conread position: 346-480
Cow position: chr27:23070321-23070194 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 347-476
Cow position: chr27:30362282-30362405 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 348-480
Cow position: chr27:26625165-26625290 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 354-480
Cow position: chr27:17926586-17926471 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 0

Show alignments to all cow chromosomes.