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Cow genome map

           
Conread name:
           
Thy1-THY010006F10
        

               
Conread position:
               
1-227
               

               
Cow position:
               
chr4:21161335-21161110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
158, 102
               

               
Conread position:
               
3-236
               

               
Cow position:
               
chr4:9434818-9434570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
43, 226
               

               
Conread position:
               
4-238
               

               
Cow position:
               
chr4:12004445-12004212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
50, 11
               

               
Conread position:
               
11-157
               

               
Cow position:
               
chr4:9571326-9571181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
33, 18
               

               
Conread position:
               
13-220
               

               
Cow position:
               
chr4:65108750-65108543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
25, 64
               

               
Conread position:
               
14-238
               

               
Cow position:
               
chr4:6093848-6094072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
90, 26
               

               
Conread position:
               
15-223
               

               
Cow position:
               
chr4:50837917-50837708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
89, 11
               

               
Conread position:
               
15-238
               

               
Cow position:
               
chr4:25197272-25197501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
11, 205
               

               
Conread position:
               
18-226
               

               
Cow position:
               
chr4:68569432-68569643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
86, 26
               

               
Conread position:
               
21-238
               

               
Cow position:
               
chr4:20147392-20147177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
80, 5
               

               
Conread position:
               
23-200
               

               
Cow position:
               
chr4:66168130-66168301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
135, 77
               

               
Conread position:
               
23-232
               

               
Cow position:
               
chr4:3853686-3853471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
80, 22
               

               
Conread position:
               
24-202
               

               
Cow position:
               
chr4:68590974-68590800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
79, 15
               

               
Conread position:
               
26-157
               

               
Cow position:
               
chr4:43436471-43436339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
26-225
               

               
Cow position:
               
chr4:41907377-41907578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
132, 74
               

               
Conread position:
               
27-188
               

               
Cow position:
               
chr4:30935156-30935321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
77, 15
               

               
Conread position:
               
27-220
               

               
Cow position:
               
chr4:19578588-19578397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 43
               

               
Conread position:
               
28-205
               

               
Cow position:
               
chr4:4150242-4150077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
75, 55
               

               
Conread position:
               
28-224
               

               
Cow position:
               
chr4:5250393-5250195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
75, 14
               

               
Conread position:
               
28-224
               

               
Cow position:
               
chr4:7043614-7043812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
75, 107
               

               
Conread position:
               
28-227
               

               
Cow position:
               
chr4:54543455-54543659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 45
               

               
Conread position:
               
28-232
               

               
Cow position:
               
chr4:18095458-18095674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
75, 46
               

               
Conread position:
               
28-232
               

               
Cow position:
               
chr4:23984915-23985124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
75, 191
               

               
Conread position:
               
28-232
               

               
Cow position:
               
chr4:31178025-31177824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
75, 85
               

               
Conread position:
               
28-233
               

               
Cow position:
               
chr4:36876654-36876859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
63, 14
               

               
Conread position:
               
28-238
               

               
Cow position:
               
chr4:2774927-2774707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
17, 196
               

               
Conread position:
               
28-238
               

               
Cow position:
               
chr4:22713294-22713499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
76, 11
               

               
Conread position:
               
29-186
               

               
Cow position:
               
chr4:7816502-7816337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
74, 13
               

               
Conread position:
               
29-201
               

               
Cow position:
               
chr4:2770273-2770103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
74, 85
               

               
Conread position:
               
29-205
               

               
Cow position:
               
chr4:501468-501657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
29-205
               

               
Cow position:
               
chr4:33838600-33838777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 79
               

               
Conread position:
               
29-207
               

               
Cow position:
               
chr4:17051082-17051262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
124, 111
               

               
Conread position:
               
29-211
               

               
Cow position:
               
chr4:54315020-54315203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
74, 97
               

               
Conread position:
               
29-215
               

               
Cow position:
               
chr4:33389064-33388872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
29-221
               

               
Cow position:
               
chr4:38944053-38944247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 88
               

               
Conread position:
               
29-222
               

               
Cow position:
               
chr4:6538698-6538894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
74, 65
               

               
Conread position:
               
29-222
               

               
Cow position:
               
chr4:63261676-63261478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
16, 107
               

               
Conread position:
               
29-223
               

               
Cow position:
               
chr4:14131625-14131434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
123, 13
               

               
Conread position:
               
29-224
               

               
Cow position:
               
chr4:50718994-50718797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
9, 161
               

               
Conread position:
               
29-225
               

               
Cow position:
               
chr4:20196714-20196514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
18, 34
               

               
Conread position:
               
29-225
               

               
Cow position:
               
chr4:46669186-46668983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
16, 191
               

               
Conread position:
               
29-225
               

               
Cow position:
               
chr4:59001935-59002135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
11, 86
               

               
Conread position:
               
29-226
               

               
Cow position:
               
chr4:26332999-26333190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
128, 13
               

               
Conread position:
               
29-226
               

               
Cow position:
               
chr4:26335166-26335357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
125, 13
               

               
Conread position:
               
29-226
               

               
Cow position:
               
chr4:35974572-35974368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 191
               

               
Conread position:
               
29-227
               

               
Cow position:
               
chr4:23799551-23799761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
47, 13
               

               
Conread position:
               
29-227
               

               
Cow position:
               
chr4:30172025-30172223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
75, 40
               

               
Conread position:
               
29-230
               

               
Cow position:
               
chr4:5790847-5790646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
75, 13
               

               
Conread position:
               
29-230
               

               
Cow position:
               
chr4:10915630-10915834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 59
               

               
Conread position:
               
29-230
               

               
Cow position:
               
chr4:45800082-45799874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
23, 10
               

               
Conread position:
               
29-230
               

               
Cow position:
               
chr4:45874260-45874464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
8, 46
               

               
Conread position:
               
29-231
               

               
Cow position:
               
chr4:69290539-69290742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
129, 71
               

               
Conread position:
               
29-232
               

               
Cow position:
               
chr4:39847937-39847728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
12, 157
               

               
Conread position:
               
29-232
               

               
Cow position:
               
chr4:52780046-52779850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
113, 13
               

               
Conread position:
               
29-233
               

               
Cow position:
               
chr4:42373956-42374157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
108, 10
               

               
Conread position:
               
29-233
               

               
Cow position:
               
chr4:66547561-66547769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
74, 102
               

               
Conread position:
               
29-234
               

               
Cow position:
               
chr4:20124765-20124970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
16, 69
               

               
Conread position:
               
29-235
               

               
Cow position:
               
chr4:41780029-41780242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
11, 57
               

               
Conread position:
               
29-236
               

               
Cow position:
               
chr4:3299596-3299801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
181, 74
               

               
Conread position:
               
29-236
               

               
Cow position:
               
chr4:11611066-11610868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
79, 87
               

               
Conread position:
               
29-236
               

               
Cow position:
               
chr4:27530314-27530114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
118, 42
               

               
Conread position:
               
29-237
               

               
Cow position:
               
chr4:17186147-17186355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 13
               

               
Conread position:
               
29-238
               

               
Cow position:
               
chr4:617175-617384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
74, 171
               

               
Conread position:
               
29-238
               

               
Cow position:
               
chr4:2681530-2681327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
75, 13
               

               
Conread position:
               
29-238
               

               
Cow position:
               
chr4:7964445-7964654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
75, 184
               

               
Conread position:
               
29-238
               

               
Cow position:
               
chr4:9444481-9444693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
74, 13
               

               
Conread position:
               
29-238
               

               
Cow position:
               
chr4:16513327-16513532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
126, 10
               

               
Conread position:
               
29-238
               

               
Cow position:
               
chr4:19238419-19238213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
75, 13
               

               
Conread position:
               
29-238
               

               
Cow position:
               
chr4:21112371-21112574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
74, 96
               

               
Conread position:
               
29-238
               

               
Cow position:
               
chr4:23059650-23059862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
73, 86
               

               
Conread position:
               
29-238
               

               
Cow position:
               
chr4:23444836-23445052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
74, 192
               

               
Conread position:
               
29-238
               

               
Cow position:
               
chr4:26959764-26959975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
74, 106
               

               
Conread position:
               
29-238
               

               
Cow position:
               
chr4:32259636-32259851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 45
               

               
Conread position:
               
29-238
               

               
Cow position:
               
chr4:33181746-33181538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
75, 48
               

               
Conread position:
               
29-238
               

               
Cow position:
               
chr4:45250174-45249964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 13
               

               
Conread position:
               
29-238
               

               
Cow position:
               
chr4:45837427-45837634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
75, 61
               

               
Conread position:
               
29-238
               

               
Cow position:
               
chr4:46494503-46494288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
75, 48
               

               
Conread position:
               
29-242
               

               
Cow position:
               
chr4:23450887-23451105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
15, 198
               

               
Conread position:
               
29-242
               

               
Cow position:
               
chr4:47748616-47748405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
75, 107
               

               
Conread position:
               
29-243
               

               
Cow position:
               
chr4:23757973-23757757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
74, 13
               

               
Conread position:
               
29-243
               

               
Cow position:
               
chr4:47125637-47125851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
75, 13
               

               
Conread position:
               
30-148
               

               
Cow position:
               
chr4:33273144-33273263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
30-210
               

               
Cow position:
               
chr4:46234961-46235139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
73, 105
               

               
Conread position:
               
30-217
               

               
Cow position:
               
chr4:21128323-21128149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
30-222
               

               
Cow position:
               
chr4:19543145-19542944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
30-226
               

               
Cow position:
               
chr4:34310264-34310450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
73, 34
               

               
Conread position:
               
30-226
               

               
Cow position:
               
chr4:36709225-36709026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
74, 15
               

               
Conread position:
               
30-238
               

               
Cow position:
               
chr4:19485506-19485291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
69, 104
               

               
Conread position:
               
30-238
               

               
Cow position:
               
chr4:62317646-62317435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
75, 9
               

               
Conread position:
               
30-243
               

               
Cow position:
               
chr4:8770292-8770091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
74, 15
               

               
Conread position:
               
31-232
               

               
Cow position:
               
chr4:2099831-2099628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
44, 14
               

               
Conread position:
               
31-238
               

               
Cow position:
               
chr4:51986374-51986585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
72, 186
               

               
Conread position:
               
32-232
               

               
Cow position:
               
chr4:10895626-10895833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
32-234
               

               
Cow position:
               
chr4:12127441-12127641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
120, 10
               

               
Conread position:
               
32-237
               

               
Cow position:
               
chr4:48381590-48381376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
15, 188
               

               
Conread position:
               
32-238
               

               
Cow position:
               
chr4:202944-203149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
71, 47
               

               
Conread position:
               
32-238
               

               
Cow position:
               
chr4:68772463-68772252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
8, 93
               

               
Conread position:
               
33-226
               

               
Cow position:
               
chr4:12031048-12030852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
17, 183
               

               
Conread position:
               
33-232
               

               
Cow position:
               
chr4:56005956-56005753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
12, 114
               

               
Conread position:
               
34-237
               

               
Cow position:
               
chr4:49158595-49158805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
69, 80
               

               
Conread position:
               
35-234
               

               
Cow position:
               
chr4:22073121-22073326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
68, 185
               

               
Conread position:
               
35-238
               

               
Cow position:
               
chr4:1985847-1985641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
68, 187
               

               
Conread position:
               
35-238
               

               
Cow position:
               
chr4:38822122-38822322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
69, 34
               

               
Conread position:
               
35-242
               

               
Cow position:
               
chr4:16091121-16091326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
68, 122
               

               
Conread position:
               
36-225
               

               
Cow position:
               
chr4:56746189-56745996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
67, 181
               

               
Conread position:
               
36-226
               

               
Cow position:
               
chr4:51083145-51083332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 80
               

               
Conread position:
               
37-199
               

               
Cow position:
               
chr4:16636882-16637043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
115, 60
               

               
Conread position:
               
37-201
               

               
Cow position:
               
chr4:36058241-36058071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
37-238
               

               
Cow position:
               
chr4:59873621-59873423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
7, 67
               

               
Conread position:
               
39-199
               

               
Cow position:
               
chr4:61451410-61451245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
39-205
               

               
Cow position:
               
chr4:23271476-23271308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
113, 64
               

               
Conread position:
               
39-210
               

               
Cow position:
               
chr4:40393003-40392836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
113, 68
               

               
Conread position:
               
39-214
               

               
Cow position:
               
chr4:30944146-30943971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
120, 61
               

               
Conread position:
               
39-214
               

               
Cow position:
               
chr4:41099126-41098952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
65, 43
               

               
Conread position:
               
39-219
               

               
Cow position:
               
chr4:56853045-56852863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
65, 30
               

               
Conread position:
               
39-221
               

               
Cow position:
               
chr4:8182442-8182627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
36, 26
               

               
Conread position:
               
39-222
               

               
Cow position:
               
chr4:52823210-52823394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
64, 75
               

               
Conread position:
               
39-227
               

               
Cow position:
               
chr4:19431498-19431691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
64, 52
               

               
Conread position:
               
39-227
               

               
Cow position:
               
chr4:51851405-51851211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 62
               

               
Conread position:
               
39-230
               

               
Cow position:
               
chr4:45483996-45483800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
65, 105
               

               
Conread position:
               
39-232
               

               
Cow position:
               
chr4:6148737-6148930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
65, 101
               

               
Conread position:
               
39-232
               

               
Cow position:
               
chr4:61313007-61313213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
65, 187
               

               
Conread position:
               
39-237
               

               
Cow position:
               
chr4:34631099-34630893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
64, 182
               

               
Conread position:
               
39-238
               

               
Cow position:
               
chr4:16814583-16814376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 182
               

               
Conread position:
               
39-238
               

               
Cow position:
               
chr4:43894617-43894819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
64, 153
               

               
Conread position:
               
39-250
               

               
Cow position:
               
chr4:47230804-47231016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
65, 37
               

               
Conread position:
               
39-250
               

               
Cow position:
               
chr4:47283819-47284031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
65, 37
               

               
Conread position:
               
40-170
               

               
Cow position:
               
chr4:8388887-8389021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
40-231
               

               
Cow position:
               
chr4:20026914-20027102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
119, 58
               

               
Conread position:
               
40-232
               

               
Cow position:
               
chr4:54937284-54937077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
64, 11
               

               
Conread position:
               
40-238
               

               
Cow position:
               
chr4:44772848-44773049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
64, 176
               

               
Conread position:
               
40-238
               

               
Cow position:
               
chr4:46560370-46560174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
64, 71
               

               
Conread position:
               
41-207
               

               
Cow position:
               
chr4:48693785-48693622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
62, 73
               

               
Conread position:
               
41-234
               

               
Cow position:
               
chr4:19709133-19708935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
63, 195
               

               
Conread position:
               
42-194
               

               
Cow position:
               
chr4:35982187-35982036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
117, 58
               

               
Conread position:
               
42-195
               

               
Cow position:
               
chr4:49808707-49808553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
110, 6
               

               
Conread position:
               
42-199
               

               
Cow position:
               
chr4:17076088-17076247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
61, 95
               

               
Conread position:
               
42-202
               

               
Cow position:
               
chr4:56395705-56395541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
42-202
               

               
Cow position:
               
chr4:56756047-56755883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
42-202
               

               
Cow position:
               
chr4:59105496-59105654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 82
               

               
Conread position:
               
42-207
               

               
Cow position:
               
chr4:62794167-62794340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
42-212
               

               
Cow position:
               
chr4:48239159-48239333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
63, 32
               

               
Conread position:
               
42-216
               

               
Cow position:
               
chr4:34919085-34919256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
61, 72
               

               
Conread position:
               
42-220
               

               
Cow position:
               
chr4:7326736-7326915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 64
               

               
Conread position:
               
42-223
               

               
Cow position:
               
chr4:30648036-30647862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
42-224
               

               
Cow position:
               
chr4:61969541-61969718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
62, 32
               

               
Conread position:
               
42-225
               

               
Cow position:
               
chr4:2713668-2713854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
62, 93
               

               
Conread position:
               
42-226
               

               
Cow position:
               
chr4:63951975-63952162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 175
               

               
Conread position:
               
42-227
               

               
Cow position:
               
chr4:30574650-30574473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
63, 19
               

               
Conread position:
               
42-227
               

               
Cow position:
               
chr4:39010242-39010054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
61, 12
               

               
Conread position:
               
42-228
               

               
Cow position:
               
chr4:30974523-30974340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 106
               

               
Conread position:
               
42-230
               

               
Cow position:
               
chr4:25354717-25354527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
62, 83
               

               
Conread position:
               
42-230
               

               
Cow position:
               
chr4:44613194-44613006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
61, 51
               

               
Conread position:
               
42-231
               

               
Cow position:
               
chr4:656619-656807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 83
               

               
Conread position:
               
42-231
               

               
Cow position:
               
chr4:27699229-27699032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
61, 179
               

               
Conread position:
               
42-232
               

               
Cow position:
               
chr4:6072862-6073050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
61, 161
               

               
Conread position:
               
42-232
               

               
Cow position:
               
chr4:12591031-12591214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
117, 8
               

               
Conread position:
               
42-232
               

               
Cow position:
               
chr4:47262726-47262534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
63, 92
               

               
Conread position:
               
42-232
               

               
Cow position:
               
chr4:48104376-48104569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
81, 174
               

               
Conread position:
               
42-235
               

               
Cow position:
               
chr4:38949339-38949540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
61, 179
               

               
Conread position:
               
42-236
               

               
Cow position:
               
chr4:58018531-58018338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
110, 17
               

               
Conread position:
               
42-236
               

               
Cow position:
               
chr4:60955510-60955325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 17
               

               
Conread position:
               
42-237
               

               
Cow position:
               
chr4:54390825-54391023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
67, 174
               

               
Conread position:
               
42-237
               

               
Cow position:
               
chr4:56410534-56410340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
61, 82
               

               
Conread position:
               
42-237
               

               
Cow position:
               
chr4:60527370-60527175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
62, 45
               

               
Conread position:
               
42-238
               

               
Cow position:
               
chr4:3388731-3388538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
62, 27
               

               
Conread position:
               
42-238
               

               
Cow position:
               
chr4:16762530-16762732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
61, 35
               

               
Conread position:
               
42-238
               

               
Cow position:
               
chr4:19539043-19539243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
55, 17
               

               
Conread position:
               
42-238
               

               
Cow position:
               
chr4:22138027-22138228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
50, 168
               

               
Conread position:
               
42-238
               

               
Cow position:
               
chr4:27521749-27521547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
62, 167
               

               
Conread position:
               
42-238
               

               
Cow position:
               
chr4:32562021-32561823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
62, 94
               

               
Conread position:
               
42-238
               

               
Cow position:
               
chr4:37732290-37732489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
61, 174
               

               
Conread position:
               
42-238
               

               
Cow position:
               
chr4:38350005-38350206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
49, 176
               

               
Conread position:
               
42-238
               

               
Cow position:
               
chr4:45636361-45636160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
32, 67
               

               
Conread position:
               
42-238
               

               
Cow position:
               
chr4:46061137-46060936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
61, 176
               

               
Conread position:
               
42-238
               

               
Cow position:
               
chr4:47305270-47305071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
61, 173
               

               
Conread position:
               
42-238
               

               
Cow position:
               
chr4:48322226-48322027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
117, 95
               

               
Conread position:
               
42-238
               

               
Cow position:
               
chr4:68159274-68159464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
62, 9
               

               
Conread position:
               
42-240
               

               
Cow position:
               
chr4:46883478-46883679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
61, 174
               

               
Conread position:
               
42-242
               

               
Cow position:
               
chr4:16881184-16881371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
183, 27
               

               
Conread position:
               
42-243
               

               
Cow position:
               
chr4:24092942-24093146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
61, 174
               

               
Conread position:
               
42-243
               

               
Cow position:
               
chr4:38946408-38946206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
62, 166
               

               
Conread position:
               
42-243
               

               
Cow position:
               
chr4:58045443-58045646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
63, 158
               

               
Conread position:
               
42-245
               

               
Cow position:
               
chr4:50687676-50687874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
61, 68
               

               
Conread position:
               
42-247
               

               
Cow position:
               
chr4:42347676-42347467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
61, 93
               

               
Conread position:
               
42-433
               

               
Cow position:
               
chr4:43909954-43909570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
61, 171
               

               
Conread position:
               
43-157
               

               
Cow position:
               
chr4:47035533-47035648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
43-173
               

               
Cow position:
               
chr4:49338227-49338099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
115, 57
               

               
Conread position:
               
43-179
               

               
Cow position:
               
chr4:29116583-29116727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
43-180
               

               
Cow position:
               
chr4:43709968-43710105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
60, 112
               

               
Conread position:
               
43-185
               

               
Cow position:
               
chr4:53941605-53941751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
43-199
               

               
Cow position:
               
chr4:59557627-59557471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
61, 19
               

               
Conread position:
               
43-206
               

               
Cow position:
               
chr4:19584902-19584728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
43-206
               

               
Cow position:
               
chr4:23943455-23943620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
116, 50
               

               
Conread position:
               
43-223
               

               
Cow position:
               
chr4:2628718-2628536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
116, 64
               

               
Conread position:
               
43-225
               

               
Cow position:
               
chr4:11186155-11185970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
59, 174
               

               
Conread position:
               
43-228
               

               
Cow position:
               
chr4:45685641-45685461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
109, 54
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr4:16870019-16870209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
61, 180
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr4:29247012-29247199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
61, 18
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr4:34383155-34383339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
61, 13
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr4:46656322-46656131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
60, 175
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr4:56236366-56236550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
61, 7
               

               
Conread position:
               
43-231
               

               
Cow position:
               
chr4:23808147-23807950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
43-231
               

               
Cow position:
               
chr4:36717674-36717484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
61, 165
               

               
Conread position:
               
43-231
               

               
Cow position:
               
chr4:41900154-41899972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
61, 22
               

               
Conread position:
               
43-231
               

               
Cow position:
               
chr4:56239676-56239859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr4:570976-570792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
109, 53
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr4:1645895-1646092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
61, 108
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr4:7698453-7698266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
60, 82
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr4:13131669-13131474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
61, 54
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr4:15905294-15905100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
60, 175
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr4:19199095-19199287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
61, 172
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr4:22101073-22101265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
61, 173
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr4:22482508-22482322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
29, 67
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr4:26644935-26644742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 173
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr4:28841607-28841416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
61, 35
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr4:29107099-29106907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
61, 172
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr4:30769220-30769035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
116, 57
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr4:40995922-40995731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
61, 165
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr4:53347793-53347970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
107, 51
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr4:56591230-56591042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
47, 159
               

               
Conread position:
               
43-235
               

               
Cow position:
               
chr4:45773654-45773459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
60, 174
               

               
Conread position:
               
43-237
               

               
Cow position:
               
chr4:47038957-47038762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
107, 64
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr4:11897114-11897301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
61, 146
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr4:13668430-13668628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
61, 173
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr4:17790108-17790298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
116, 37
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr4:27632629-27632441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
61, 31
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr4:32458668-32458867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
60, 180
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr4:45212998-45213196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
61, 53
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr4:48902424-48902631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
53, 182
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr4:54789830-54789633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 8
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr4:60131417-60131219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
64, 172
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr4:61608780-61608971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
116, 26
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr4:63078414-63078216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
60, 173
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr4:67393283-67393085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
60, 174
               

               
Conread position:
               
43-239
               

               
Cow position:
               
chr4:37985917-37985725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
61, 72
               

               
Conread position:
               
43-242
               

               
Cow position:
               
chr4:19292902-19292711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
25, 94
               

               
Conread position:
               
43-254
               

               
Cow position:
               
chr4:55270578-55270791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
61, 97
               

               
Conread position:
               
44-147
               

               
Cow position:
               
chr4:57568879-57568982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
60, 6
               

               
Conread position:
               
44-164
               

               
Cow position:
               
chr4:1184944-1184825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
59, 79
               

               
Conread position:
               
44-184
               

               
Cow position:
               
chr4:44024352-44024496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
44-201
               

               
Cow position:
               
chr4:51617809-51617969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
59, 80
               

               
Conread position:
               
44-202
               

               
Cow position:
               
chr4:19420568-19420728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
59, 50
               

               
Conread position:
               
44-202
               

               
Cow position:
               
chr4:43579229-43579384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
60, 17
               

               
Conread position:
               
44-205
               

               
Cow position:
               
chr4:50131709-50131542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
44-206
               

               
Cow position:
               
chr4:38940755-38940918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
95, 61
               

               
Conread position:
               
44-207
               

               
Cow position:
               
chr4:49794837-49794683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
44-213
               

               
Cow position:
               
chr4:19200293-19200130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
108, 33
               

               
Conread position:
               
44-221
               

               
Cow position:
               
chr4:34641536-34641717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
59, 110
               

               
Conread position:
               
44-226
               

               
Cow position:
               
chr4:25802881-25802696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
60, 172
               

               
Conread position:
               
44-228
               

               
Cow position:
               
chr4:46435521-46435328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 175
               

               
Conread position:
               
44-228
               

               
Cow position:
               
chr4:46761797-46761611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
62, 37
               

               
Conread position:
               
44-229
               

               
Cow position:
               
chr4:30691189-30691007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
59, 79
               

               
Conread position:
               
44-230
               

               
Cow position:
               
chr4:19315820-19316003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
82, 64
               

               
Conread position:
               
44-230
               

               
Cow position:
               
chr4:42080518-42080700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
116, 25
               

               
Conread position:
               
44-231
               

               
Cow position:
               
chr4:38209788-38209974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
115, 63
               

               
Conread position:
               
44-232
               

               
Cow position:
               
chr4:4647587-4647399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
60, 10
               

               
Conread position:
               
44-232
               

               
Cow position:
               
chr4:9269711-9269887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
125, 56
               

               
Conread position:
               
44-232
               

               
Cow position:
               
chr4:11506602-11506783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
60, 25
               

               
Conread position:
               
44-232
               

               
Cow position:
               
chr4:14020686-14020500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
59, 128
               

               
Conread position:
               
44-232
               

               
Cow position:
               
chr4:19102689-19102882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
59, 173
               

               
Conread position:
               
44-232
               

               
Cow position:
               
chr4:19500901-19501092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 44
               

               
Conread position:
               
44-232
               

               
Cow position:
               
chr4:34234650-34234471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
59, 30
               

               
Conread position:
               
44-232
               

               
Cow position:
               
chr4:34722697-34722887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
59, 159
               

               
Conread position:
               
44-233
               

               
Cow position:
               
chr4:12867287-12867104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
104, 56
               

               
Conread position:
               
44-234
               

               
Cow position:
               
chr4:508725-508911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
115, 33
               

               
Conread position:
               
44-234
               

               
Cow position:
               
chr4:42044788-42044978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
61, 17
               

               
Conread position:
               
44-236
               

               
Cow position:
               
chr4:1015258-1015066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
60, 85
               

               
Conread position:
               
44-236
               

               
Cow position:
               
chr4:60772357-60772170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
108, 6
               

               
Conread position:
               
44-237
               

               
Cow position:
               
chr4:12676982-12676798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
106, 56
               

               
Conread position:
               
44-237
               

               
Cow position:
               
chr4:19496687-19496489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
63, 174
               

               
Conread position:
               
44-237
               

               
Cow position:
               
chr4:54871836-54872032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
60, 172
               

               
Conread position:
               
44-238
               

               
Cow position:
               
chr4:8083621-8083805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
115, 56
               

               
Conread position:
               
44-238
               

               
Cow position:
               
chr4:13221993-13222191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
58, 179
               

               
Conread position:
               
44-238
               

               
Cow position:
               
chr4:19573476-19573278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
60, 174
               

               
Conread position:
               
44-238
               

               
Cow position:
               
chr4:29384054-29384238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
102, 56
               

               
Conread position:
               
44-238
               

               
Cow position:
               
chr4:31505831-31506030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
59, 174
               

               
Conread position:
               
44-238
               

               
Cow position:
               
chr4:45076892-45077083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
108, 63
               

               
Conread position:
               
44-238
               

               
Cow position:
               
chr4:46136936-46136744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
60, 79
               

               
Conread position:
               
44-238
               

               
Cow position:
               
chr4:59785507-59785316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
60, 71
               

               
Conread position:
               
44-241
               

               
Cow position:
               
chr4:26012599-26012392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
59, 140
               

               
Conread position:
               
44-241
               

               
Cow position:
               
chr4:26830905-26830698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
59, 140
               

               
Conread position:
               
44-243
               

               
Cow position:
               
chr4:8352376-8352577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
60, 90
               

               
Conread position:
               
44-245
               

               
Cow position:
               
chr4:41370754-41370954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
59, 107
               

               
Conread position:
               
45-185
               

               
Cow position:
               
chr4:63198179-63198326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
45-193
               

               
Cow position:
               
chr4:53050181-53050030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
58, 128
               

               
Conread position:
               
45-197
               

               
Cow position:
               
chr4:45723435-45723279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
45-203
               

               
Cow position:
               
chr4:27691484-27691645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
45-232
               

               
Cow position:
               
chr4:13590273-13590083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
58, 68
               

               
Conread position:
               
45-232
               

               
Cow position:
               
chr4:18974612-18974423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
59, 72
               

               
Conread position:
               
45-232
               

               
Cow position:
               
chr4:44183934-44184115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
112, 49
               

               
Conread position:
               
45-232
               

               
Cow position:
               
chr4:48127761-48127565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
58, 138
               

               
Conread position:
               
45-237
               

               
Cow position:
               
chr4:4084271-4084455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
45-237
               

               
Cow position:
               
chr4:61999012-61999207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
59, 81
               

               
Conread position:
               
45-238
               

               
Cow position:
               
chr4:13919165-13918975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
23, 13
               

               
Conread position:
               
45-238
               

               
Cow position:
               
chr4:19700293-19700092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
58, 174
               

               
Conread position:
               
45-238
               

               
Cow position:
               
chr4:40414441-40414634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
10, 80
               

               
Conread position:
               
46-200
               

               
Cow position:
               
chr4:60370341-60370498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
57, 89
               

               
Conread position:
               
46-231
               

               
Cow position:
               
chr4:13344721-13344539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
54, 89
               

               
Conread position:
               
46-235
               

               
Cow position:
               
chr4:12474036-12473846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
51, 140
               

               
Conread position:
               
46-235
               

               
Cow position:
               
chr4:13284569-13284379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
51, 140
               

               
Conread position:
               
46-237
               

               
Cow position:
               
chr4:48138130-48137943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
7, 81
               

               
Conread position:
               
46-238
               

               
Cow position:
               
chr4:49629671-49629473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
46-242
               

               
Cow position:
               
chr4:29805184-29805380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
81, 161
               

               
Conread position:
               
46-242
               

               
Cow position:
               
chr4:37343305-37343117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
112, 41
               

               
Conread position:
               
47-230
               

               
Cow position:
               
chr4:2680474-2680288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
60, 168
               

               
Conread position:
               
48-222
               

               
Cow position:
               
chr4:4320810-4320979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
55, 74
               

               
Conread position:
               
48-232
               

               
Cow position:
               
chr4:31004229-31004409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
48-238
               

               
Cow position:
               
chr4:43740714-43740528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
104, 59
               

               
Conread position:
               
49-198
               

               
Cow position:
               
chr4:21531458-21531611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
49-230
               

               
Cow position:
               
chr4:32693970-32693789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
55, 75
               

               
Conread position:
               
49-231
               

               
Cow position:
               
chr4:12245393-12245213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
54, 76
               

               
Conread position:
               
49-234
               

               
Cow position:
               
chr4:63349293-63349487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
54, 173
               

               
Conread position:
               
49-238
               

               
Cow position:
               
chr4:27511730-27511538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
54, 94
               

               
Conread position:
               
49-242
               

               
Cow position:
               
chr4:11187634-11187441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
55, 163
               

               
Conread position:
               
50-238
               

               
Cow position:
               
chr4:10999526-10999721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
54, 176
               

               
Conread position:
               
50-238
               

               
Cow position:
               
chr4:19325444-19325253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
54, 165
               

               
Conread position:
               
51-207
               

               
Cow position:
               
chr4:47417593-47417436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
53, 16
               

               
Conread position:
               
51-230
               

               
Cow position:
               
chr4:50368592-50368411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
53, 47
               

               
Conread position:
               
51-232
               

               
Cow position:
               
chr4:34165806-34165973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
51-238
               

               
Cow position:
               
chr4:13326772-13326957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
90, 5
               

               
Conread position:
               
51-238
               

               
Cow position:
               
chr4:14512372-14512564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
44, 59
               

               
Conread position:
               
51-242
               

               
Cow position:
               
chr4:38358643-38358831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
52, 45
               

               
Conread position:
               
52-222
               

               
Cow position:
               
chr4:11154452-11154278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
52, 164
               

               
Conread position:
               
52-227
               

               
Cow position:
               
chr4:30845564-30845376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
52, 175
               

               
Conread position:
               
52-231
               

               
Cow position:
               
chr4:4827312-4827126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
69, 169
               

               
Conread position:
               
52-232
               

               
Cow position:
               
chr4:26323923-26323740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
53, 161
               

               
Conread position:
               
52-238
               

               
Cow position:
               
chr4:45775151-45775344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
49, 168
               

               
Conread position:
               
53-238
               

               
Cow position:
               
chr4:5577036-5577217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
51, 97
               

               
Conread position:
               
53-238
               

               
Cow position:
               
chr4:51193154-51192961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
54-229
               

               
Cow position:
               
chr4:48227516-48227685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
98, 7
               

               
Conread position:
               
54-232
               

               
Cow position:
               
chr4:54171802-54171626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
78, 51
               

               
Conread position:
               
54-246
               

               
Cow position:
               
chr4:34210214-34210018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
14, 28
               

               
Conread position:
               
55-210
               

               
Cow position:
               
chr4:39092060-39091907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
104, 45
               

               
Conread position:
               
55-232
               

               
Cow position:
               
chr4:54880898-54881075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
102, 157
               

               
Conread position:
               
56-201
               

               
Cow position:
               
chr4:45801693-45801545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
65-238
               

               
Cow position:
               
chr4:12901389-12901564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
41, 34
               

               
Conread position:
               
66-223
               

               
Cow position:
               
chr4:68807940-68808100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
41, 151
               

               
Conread position:
               
66-232
               

               
Cow position:
               
chr4:17052420-17052593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 155
               

               
Conread position:
               
66-232
               

               
Cow position:
               
chr4:24371691-24371861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
38, 150
               

               
Conread position:
               
66-232
               

               
Cow position:
               
chr4:28836703-28836536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
38, 148
               

               
Conread position:
               
66-232
               

               
Cow position:
               
chr4:53819519-53819686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
55, 35
               

               
Conread position:
               
66-238
               

               
Cow position:
               
chr4:58423631-58423806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 149
               

               
Conread position:
               
67-230
               

               
Cow position:
               
chr4:348263-348423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
92, 34
               

               
Conread position:
               
69-232
               

               
Cow position:
               
chr4:1236700-1236873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 154
               

               
Conread position:
               
69-238
               

               
Cow position:
               
chr4:61188704-61188875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
35, 146
               

               
Conread position:
               
70-229
               

               
Cow position:
               
chr4:42277824-42277981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 120
               

               
Conread position:
               
72-237
               

               
Cow position:
               
chr4:45862572-45862412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
77-215
               

               
Cow position:
               
chr4:22050958-22051100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
82-238
               

               
Cow position:
               
chr4:46455916-46456071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
22, 131
               

               
Conread position:
               
85-230
               

               
Cow position:
               
chr4:21520728-21520580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
19, 131
               

               
Conread position:
               
101-248
               

               
Cow position:
               
chr4:19561922-19561772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 115
               

               
Conread position:
               
104-237
               

               
Cow position:
               
chr4:33091503-33091368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
48, 111
               

               
Conread position:
               
105-238
               

               
Cow position:
               
chr4:2000-1865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
54, 110
               

               
Conread position:
               
105-238
               

               
Cow position:
               
chr4:19098601-19098463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
105-238
               

               
Cow position:
               
chr4:19304475-19304338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
24, 112
               

               
Conread position:
               
105-238
               

               
Cow position:
               
chr4:44782503-44782369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
53, 116
               

               
Conread position:
               
106-237
               

               
Cow position:
               
chr4:51920672-51920539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
53, 109
               

               
Conread position:
               
106-238
               

               
Cow position:
               
chr4:44838767-44838898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
53, 35
               

               
Conread position:
               
106-238
               

               
Cow position:
               
chr4:61926563-61926696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
28, 32
               

               
Conread position:
               
334-478
               

               
Cow position:
               
chr4:5460937-5461074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
334-480
               

               
Cow position:
               
chr4:17832979-17833122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
336-507
               

               
Cow position:
               
chr4:41292055-41292226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
146, 46
               

               
Conread position:
               
339-472
               

               
Cow position:
               
chr4:31859186-31859053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
339-480
               

               
Cow position:
               
chr4:56410106-56409965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
50, 45
               

               
Conread position:
               
340-480
               

               
Cow position:
               
chr4:3388464-3388328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
340-480
               

               
Cow position:
               
chr4:5610154-5610291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
340-480
               

               
Cow position:
               
chr4:18095753-18095895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
340-480
               

               
Cow position:
               
chr4:24688425-24688565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-480
               

               
Cow position:
               
chr4:43749891-43750028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
340-480
               

               
Cow position:
               
chr4:54667771-54667907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
340-480
               

               
Cow position:
               
chr4:61972544-61972691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
340-492
               

               
Cow position:
               
chr4:23451178-23451324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
341-480
               

               
Cow position:
               
chr4:36893273-36893137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
341-480
               

               
Cow position:
               
chr4:44782289-44782158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
341-480
               

               
Cow position:
               
chr4:46370731-46370594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
341-480
               

               
Cow position:
               
chr4:48485920-48485784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
342-469
               

               
Cow position:
               
chr4:30791887-30791759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
342-503
               

               
Cow position:
               
chr4:38799277-38799436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
148, 42
               

               
Conread position:
               
343-474
               

               
Cow position:
               
chr4:13608158-13608029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
343-475
               

               
Cow position:
               
chr4:17474353-17474227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
343-477
               

               
Cow position:
               
chr4:19584631-19584491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
343-477
               

               
Cow position:
               
chr4:23445135-23445266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
40, 86
               

               
Conread position:
               
343-478
               

               
Cow position:
               
chr4:37619973-37620102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
343-478
               

               
Cow position:
               
chr4:45367650-45367519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
343-479
               

               
Cow position:
               
chr4:41867358-41867229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
343-480
               

               
Cow position:
               
chr4:1237202-1237333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
343-480
               

               
Cow position:
               
chr4:10732137-10732002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
343-480
               

               
Cow position:
               
chr4:15905012-15904882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
343-480
               

               
Cow position:
               
chr4:22744239-22744105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
343-480
               

               
Cow position:
               
chr4:27687838-27687707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
343-480
               

               
Cow position:
               
chr4:32726140-32726006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
343-480
               

               
Cow position:
               
chr4:53209153-53209019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
343-480
               

               
Cow position:
               
chr4:56233601-56233471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
343-492
               

               
Cow position:
               
chr4:11201733-11201589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
343-494
               

               
Cow position:
               
chr4:43515640-43515490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
142, 39
               

               
Conread position:
               
343-501
               

               
Cow position:
               
chr4:25359524-25359372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
343-502
               

               
Cow position:
               
chr4:33421444-33421603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
139, 71
               

               
Conread position:
               
343-502
               

               
Cow position:
               
chr4:62772011-62772174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
42, 157
               

               
Conread position:
               
343-506
               

               
Cow position:
               
chr4:28836449-28836281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
343-507
               

               
Cow position:
               
chr4:41301076-41301237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
139, 45
               

               
Conread position:
               
344-480
               

               
Cow position:
               
chr4:656902-657034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
85, 39
               

               
Conread position:
               
345-463
               

               
Cow position:
               
chr4:29238124-29238242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
345-478
               

               
Cow position:
               
chr4:23911671-23911803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
345-480
               

               
Cow position:
               
chr4:4321088-4321222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
345-480
               

               
Cow position:
               
chr4:5984127-5984261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
345-480
               

               
Cow position:
               
chr4:14743174-14743043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
345-480
               

               
Cow position:
               
chr4:16736420-16736287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
31, 70
               

               
Conread position:
               
345-480
               

               
Cow position:
               
chr4:19322170-19322295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
345-480
               

               
Cow position:
               
chr4:46591577-46591443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
93, 32
               

               
Conread position:
               
345-480
               

               
Cow position:
               
chr4:47289989-47289854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
345-507
               

               
Cow position:
               
chr4:12591299-12591457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
137, 54
               

               
Conread position:
               
346-474
               

               
Cow position:
               
chr4:63365465-63365593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
346-478
               

               
Cow position:
               
chr4:25197583-25197712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
346-480
               

               
Cow position:
               
chr4:23060085-23060219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
346-480
               

               
Cow position:
               
chr4:57555882-57555750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
346-502
               

               
Cow position:
               
chr4:203231-203386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
148, 32
               

               
Conread position:
               
346-503
               

               
Cow position:
               
chr4:53832959-53832807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
347-480
               

               
Cow position:
               
chr4:25879308-25879179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
42, 28
               
Show alignments to all cow chromosomes.