Cow genome map

Conread name: Thy1-THY010006F10

Conread position: 2-238
Cow position: chrX:42449746-42449986 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 185
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 44, 27

Conread position: 9-202
Cow position: chrX:29681860-29682048 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 150, 10

Conread position: 15-238
Cow position: chrX:15231404-15231632 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 26, 203

Conread position: 15-238
Cow position: chrX:40337165-40336939 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 175
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 30, 194

Conread position: 21-238
Cow position: chrX:6559208-6559420 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 21, 140

Conread position: 24-238
Cow position: chrX:35382802-35383008 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 123, 17

Conread position: 24-238
Cow position: chrX:40680858-40680642 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 169
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 80, 15

Conread position: 26-238
Cow position: chrX:8917638-8917422 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 15, 191

Conread position: 26-238
Cow position: chrX:28846651-28846865 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 77, 25

Conread position: 26-242
Cow position: chrX:27416338-27416118 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 22, 170

Conread position: 27-190
Cow position: chrX:3543105-3542931 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 79, 12

Conread position: 27-210
Cow position: chrX:20977266-20977454 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 28, 43

Conread position: 27-237
Cow position: chrX:28850958-28850758 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 125, 24

Conread position: 27-238
Cow position: chrX:42432270-42432486 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 169
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 10, 91

Conread position: 28-215
Cow position: chrX:20677901-20678092 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 95

Conread position: 28-228
Cow position: chrX:27668722-27668920 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 131, 59

Conread position: 28-229
Cow position: chrX:8642285-8642083 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 164
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 75, 153

Conread position: 28-232
Cow position: chrX:4092162-4091958 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 159
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 76, 33

Conread position: 28-232
Cow position: chrX:37749754-37749949 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 76, 26

Conread position: 28-232
Cow position: chrX:40108272-40108485 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 18, 125

Conread position: 28-233
Cow position: chrX:876608-876809 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 162
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 75, 14

Conread position: 28-238
Cow position: chrX:16763008-16762799 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 131, 72

Conread position: 28-238
Cow position: chrX:30672144-30672368 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 75, 199

Conread position: 29-148
Cow position: chrX:42220461-42220582 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 29-157
Cow position: chrX:42159180-42159052 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 74, 10

Conread position: 29-196
Cow position: chrX:11674351-11674178 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 29-199
Cow position: chrX:48574115-48574291 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 74, 0

Conread position: 29-203
Cow position: chrX:16801028-16801201 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 75, 45

Conread position: 29-205
Cow position: chrX:37717960-37717784 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 74, 16

Conread position: 29-206
Cow position: chrX:22284078-22283895 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 74, 0

Conread position: 29-207
Cow position: chrX:44040419-44040234 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 11, 0

Conread position: 29-210
Cow position: chrX:42087067-42086883 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 34

Conread position: 29-211
Cow position: chrX:26720452-26720630 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 123, 13

Conread position: 29-211
Cow position: chrX:28107084-28106901 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 146
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 74, 13

Conread position: 29-214
Cow position: chrX:16770303-16770115 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 75, 13

Conread position: 29-214
Cow position: chrX:41011128-41010949 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 74, 13

Conread position: 29-215
Cow position: chrX:47100355-47100547 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 29-216
Cow position: chrX:1101790-1101606 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 96

Conread position: 29-220
Cow position: chrX:10415014-10415207 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 74, 13

Conread position: 29-222
Cow position: chrX:24633927-24633737 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 11, 40

Conread position: 29-223
Cow position: chrX:31983338-31983542 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 194

Conread position: 29-225
Cow position: chrX:20957478-20957276 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 10, 24

Conread position: 29-225
Cow position: chrX:41453538-41453343 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 130, 71

Conread position: 29-230
Cow position: chrX:12095531-12095736 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 161
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 16, 188

Conread position: 29-231
Cow position: chrX:10279113-10278899 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 79, 13

Conread position: 29-231
Cow position: chrX:22115075-22115282 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 45, 188

Conread position: 29-231
Cow position: chrX:23358878-23359076 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 130, 71

Conread position: 29-232
Cow position: chrX:4327943-4328149 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 39, 187

Conread position: 29-232
Cow position: chrX:41674338-41674138 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 17, 39

Conread position: 29-235
Cow position: chrX:14925512-14925307 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 76, 179

Conread position: 29-237
Cow position: chrX:4399356-4399154 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 74, 13

Conread position: 29-237
Cow position: chrX:11781490-11781282 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 165
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 11, 127

Conread position: 29-237
Cow position: chrX:20168792-20168587 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 160
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 75, 10

Conread position: 29-237
Cow position: chrX:39290594-39290388 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 95

Conread position: 29-238
Cow position: chrX:152144-151933 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 74, 181

Conread position: 29-238
Cow position: chrX:3580184-3579972 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 75, 187

Conread position: 29-238
Cow position: chrX:4632615-4632830 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 166
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 75, 0

Conread position: 29-238
Cow position: chrX:7351541-7351328 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 11, 41

Conread position: 29-238
Cow position: chrX:13924098-13923892 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 161
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 118, 10

Conread position: 29-238
Cow position: chrX:25207623-25207827 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 127, 13

Conread position: 29-238
Cow position: chrX:26205219-26205420 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 162
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 123, 25

Conread position: 29-238
Cow position: chrX:28632244-28632457 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 74, 13

Conread position: 29-238
Cow position: chrX:31250629-31250416 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 163
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 49, 188

Conread position: 29-238
Cow position: chrX:32574561-32574345 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 9, 80

Conread position: 29-238
Cow position: chrX:34554964-34554751 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 13, 188

Conread position: 29-238
Cow position: chrX:35392066-35392266 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 75, 45

Conread position: 29-238
Cow position: chrX:38321145-38321354 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 76, 10

Conread position: 29-238
Cow position: chrX:41941862-41941651 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 75, 69

Conread position: 29-238
Cow position: chrX:46532252-46532467 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 74, 10

Conread position: 29-238
Cow position: chrX:48558984-48558774 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 165
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 78, 13

Conread position: 29-245
Cow position: chrX:31489759-31489541 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 74, 10

Conread position: 29-252
Cow position: chrX:19203106-19203334 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 74, 187

Conread position: 30-207
Cow position: chrX:4602699-4602880 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 6, 162

Conread position: 30-228
Cow position: chrX:8869166-8869364 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 73, 82

Conread position: 30-232
Cow position: chrX:42836416-42836215 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 161
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 73, 17

Conread position: 30-238
Cow position: chrX:27508786-27508994 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 168
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 73, 159

Conread position: 30-238
Cow position: chrX:37956084-37955875 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 17, 37

Conread position: 30-243
Cow position: chrX:35431003-35431216 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 7, 13

Conread position: 30-245
Cow position: chrX:39220325-39220100 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 46, 14

Conread position: 31-195
Cow position: chrX:33678234-33678403 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 73, 11

Conread position: 31-232
Cow position: chrX:16541419-16541622 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 73, 185

Conread position: 31-238
Cow position: chrX:27261427-27261219 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 165
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 73, 38

Conread position: 31-238
Cow position: chrX:41027397-41027187 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 165
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 74, 186

Conread position: 32-192
Cow position: chrX:13784977-13785149 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 77, 10

Conread position: 32-222
Cow position: chrX:6634581-6634388 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 72, 184

Conread position: 32-228
Cow position: chrX:36921906-36922104 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 72, 18

Conread position: 32-230
Cow position: chrX:45843354-45843558 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 15, 58

Conread position: 33-216
Cow position: chrX:17298495-17298308 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 70, 159

Conread position: 33-238
Cow position: chrX:38549682-38549473 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 167
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 21, 69

Conread position: 34-148
Cow position: chrX:19161896-19162011 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 34-206
Cow position: chrX:9451576-9451404 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 11, 68

Conread position: 35-148
Cow position: chrX:32590172-32590286 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 35-199
Cow position: chrX:33466855-33466690 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 135
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 67, 34

Conread position: 35-199
Cow position: chrX:34193847-34194015 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 35-207
Cow position: chrX:5063469-5063303 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 69, 30

Conread position: 35-217
Cow position: chrX:1938246-1938063 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 68, 89

Conread position: 35-231
Cow position: chrX:31480199-31480006 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 68, 79

Conread position: 35-232
Cow position: chrX:16763697-16763893 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 123, 68

Conread position: 35-232
Cow position: chrX:21593525-21593321 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 37

Conread position: 35-238
Cow position: chrX:26493240-26493034 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 68, 181

Conread position: 35-238
Cow position: chrX:37489962-37489747 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 68, 190

Conread position: 35-243
Cow position: chrX:18196233-18196040 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 122

Conread position: 36-211
Cow position: chrX:41199454-41199278 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 67, 78

Conread position: 36-227
Cow position: chrX:9201775-9201587 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 80

Conread position: 36-228
Cow position: chrX:21328146-21327949 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 68, 0

Conread position: 37-228
Cow position: chrX:32215460-32215262 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 37-240
Cow position: chrX:43150662-43150457 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 66, 179

Conread position: 38-222
Cow position: chrX:12973-12793 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 110, 72

Conread position: 38-240
Cow position: chrX:35681797-35681594 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 162
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 67, 91

Conread position: 39-191
Cow position: chrX:42506717-42506875 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 39-203
Cow position: chrX:23335746-23335914 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 64, 0

Conread position: 39-222
Cow position: chrX:41990894-41991090 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 64, 181

Conread position: 39-229
Cow position: chrX:16555994-16556180 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 110, 51

Conread position: 39-229
Cow position: chrX:42875438-42875250 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 149
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 65, 85

Conread position: 39-231
Cow position: chrX:16984864-16984676 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 62, 78

Conread position: 39-231
Cow position: chrX:29050471-29050285 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 112, 37

Conread position: 39-231
Cow position: chrX:40320637-40320441 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 8, 177

Conread position: 39-232
Cow position: chrX:161629-161446 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 102, 30

Conread position: 39-237
Cow position: chrX:51673-51867 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 64, 86

Conread position: 39-238
Cow position: chrX:4109414-4109212 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 65, 174

Conread position: 39-238
Cow position: chrX:17524154-17524356 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 157
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 64, 177

Conread position: 39-238
Cow position: chrX:25035152-25035354 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 157
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 64, 177

Conread position: 39-238
Cow position: chrX:27446912-27446714 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 120, 60

Conread position: 39-238
Cow position: chrX:27511645-27511456 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 113, 20

Conread position: 39-238
Cow position: chrX:38964326-38964136 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 120, 51

Conread position: 39-240
Cow position: chrX:42894151-42893952 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 158
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 85, 62

Conread position: 40-207
Cow position: chrX:23497468-23497633 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 6, 61

Conread position: 40-213
Cow position: chrX:41166600-41166773 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 7, 84

Conread position: 40-222
Cow position: chrX:5118270-5118456 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 63, 95

Conread position: 40-227
Cow position: chrX:29541999-29542178 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 6, 75

Conread position: 40-228
Cow position: chrX:44123477-44123293 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 112, 57

Conread position: 40-230
Cow position: chrX:38968123-38967925 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 63, 159

Conread position: 40-231
Cow position: chrX:27145827-27145639 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 63, 74

Conread position: 40-232
Cow position: chrX:2936181-2935991 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 119, 61

Conread position: 40-238
Cow position: chrX:29723979-29723768 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 187

Conread position: 40-238
Cow position: chrX:44339093-44339293 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 64, 21

Conread position: 42-148
Cow position: chrX:23185111-23185218 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 42-157
Cow position: chrX:41194131-41194016 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 26, 46

Conread position: 42-200
Cow position: chrX:14135901-14135743 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 105, 65

Conread position: 42-201
Cow position: chrX:4559960-4559797 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 42-202
Cow position: chrX:39642402-39642559 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 117, 61

Conread position: 42-205
Cow position: chrX:41215549-41215382 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 42-207
Cow position: chrX:296618-296449 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 42-207
Cow position: chrX:6267896-6267720 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 42-211
Cow position: chrX:11602261-11602429 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 62, 27

Conread position: 42-213
Cow position: chrX:22552753-22552927 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 62, 30

Conread position: 42-221
Cow position: chrX:23471642-23471823 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 87, 58

Conread position: 42-221
Cow position: chrX:34412074-34411889 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 42-221
Cow position: chrX:41858658-41858839 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 61, 72

Conread position: 42-223
Cow position: chrX:29451319-29451510 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 62, 0

Conread position: 42-225
Cow position: chrX:11517752-11517939 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 64, 175

Conread position: 42-226
Cow position: chrX:35409978-35409792 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 148
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 61, 173

Conread position: 42-226
Cow position: chrX:36367708-36367895 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 61, 174

Conread position: 42-226
Cow position: chrX:41454727-41454914 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 62, 174

Conread position: 42-227
Cow position: chrX:27442312-27442502 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 61, 0

Conread position: 42-227
Cow position: chrX:41435316-41435513 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 42-228
Cow position: chrX:597252-597438 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 61, 136

Conread position: 42-228
Cow position: chrX:13177258-13177438 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 117, 27

Conread position: 42-228
Cow position: chrX:40035216-40035404 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 62, 12

Conread position: 42-230
Cow position: chrX:6389305-6389113 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 85, 58

Conread position: 42-231
Cow position: chrX:32867096-32866910 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 111, 59

Conread position: 42-232
Cow position: chrX:11762785-11762967 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 105, 58

Conread position: 42-232
Cow position: chrX:17949266-17949459 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 62, 173

Conread position: 42-232
Cow position: chrX:32910323-32910138 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 61, 75

Conread position: 42-232
Cow position: chrX:48822116-48822308 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 151
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 66, 87

Conread position: 42-234
Cow position: chrX:45412017-45412205 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 61, 104

Conread position: 42-236
Cow position: chrX:6407770-6407574 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 158
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 62, 153

Conread position: 42-237
Cow position: chrX:9251937-9252134 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 61, 81

Conread position: 42-237
Cow position: chrX:12979609-12979805 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 62, 80

Conread position: 42-237
Cow position: chrX:27270595-27270404 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 155
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 110, 36

Conread position: 42-237
Cow position: chrX:28940470-28940271 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 61, 79

Conread position: 42-238
Cow position: chrX:4268844-4269037 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 62, 81

Conread position: 42-238
Cow position: chrX:11656304-11656109 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 117, 58

Conread position: 42-238
Cow position: chrX:13122170-13121966 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 161
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 61, 175

Conread position: 42-238
Cow position: chrX:24332003-24331804 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 158
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 63, 174

Conread position: 42-238
Cow position: chrX:25412145-25411935 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 59, 27

Conread position: 42-238
Cow position: chrX:34398557-34398756 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 61, 174

Conread position: 42-238
Cow position: chrX:35659020-35658827 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 62, 27

Conread position: 42-238
Cow position: chrX:38094300-38094488 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 117, 24

Conread position: 42-238
Cow position: chrX:41238136-41238326 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 116, 67

Conread position: 42-238
Cow position: chrX:42492295-42492495 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 159
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 62, 176

Conread position: 42-238
Cow position: chrX:42855689-42855486 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 157
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 61, 179

Conread position: 42-238
Cow position: chrX:44055029-44054830 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 61, 174

Conread position: 42-240
Cow position: chrX:32747946-32747758 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 117, 9

Conread position: 42-240
Cow position: chrX:36283566-36283366 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 62, 173

Conread position: 42-243
Cow position: chrX:4403544-4403340 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 61, 174

Conread position: 42-243
Cow position: chrX:7179109-7178920 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 126, 32

Conread position: 42-243
Cow position: chrX:41790201-41790406 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 164
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 63, 175

Conread position: 42-243
Cow position: chrX:42331499-42331307 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 42-245
Cow position: chrX:24365596-24365800 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 61, 135

Conread position: 42-251
Cow position: chrX:19018602-19018816 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 59, 176

Conread position: 42-254
Cow position: chrX:37867480-37867264 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 165
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 62, 174

Conread position: 43-144
Cow position: chrX:27226707-27226605 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 43-179
Cow position: chrX:1996226-1996366 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 43-185
Cow position: chrX:11670912-11670766 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 43-194
Cow position: chrX:35509455-35509608 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 80

Conread position: 43-207
Cow position: chrX:4169803-4169973 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 89

Conread position: 43-207
Cow position: chrX:27175225-27175056 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 39, 0

Conread position: 43-211
Cow position: chrX:26881854-26882026 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 136
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 60, 0

Conread position: 43-215
Cow position: chrX:1121141-1121317 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 43-220
Cow position: chrX:37867658-37867477 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 143
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 61, 0

Conread position: 43-220
Cow position: chrX:42461402-42461572 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 43-222
Cow position: chrX:13347494-13347317 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 125

Conread position: 43-223
Cow position: chrX:8759848-8759668 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 150
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 60, 134

Conread position: 43-224
Cow position: chrX:46068539-46068717 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 61, 15

Conread position: 43-230
Cow position: chrX:31729662-31729478 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 109, 58

Conread position: 43-230
Cow position: chrX:31948709-31948899 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 61, 172

Conread position: 43-230
Cow position: chrX:33020663-33020473 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 133
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 61, 173

Conread position: 43-230
Cow position: chrX:36976173-36975987 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 61, 21

Conread position: 43-231
Cow position: chrX:13147209-13147016 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 14, 140

Conread position: 43-231
Cow position: chrX:18439222-18439031 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 61, 172

Conread position: 43-231
Cow position: chrX:34441228-34441419 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 60, 173

Conread position: 43-231
Cow position: chrX:39427073-39427264 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 174

Conread position: 43-232
Cow position: chrX:3494596-3494788 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 65, 172

Conread position: 43-232
Cow position: chrX:17231962-17231769 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 60, 173

Conread position: 43-232
Cow position: chrX:17293181-17292989 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 61, 172

Conread position: 43-232
Cow position: chrX:17498548-17498356 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 155
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 61, 174

Conread position: 43-232
Cow position: chrX:19717736-19717555 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 116, 18

Conread position: 43-232
Cow position: chrX:19761974-19761788 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 116, 58

Conread position: 43-232
Cow position: chrX:20339670-20339858 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 159
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 61, 29

Conread position: 43-232
Cow position: chrX:22813290-22813096 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 61, 172

Conread position: 43-232
Cow position: chrX:25049056-25049248 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 61, 172

Conread position: 43-232
Cow position: chrX:26979566-26979755 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 61, 32

Conread position: 43-232
Cow position: chrX:28068076-28067884 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 151
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 61, 170

Conread position: 43-232
Cow position: chrX:30962650-30962843 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 152
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 60, 173

Conread position: 43-232
Cow position: chrX:35276211-35276019 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 150
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 61, 174

Conread position: 43-232
Cow position: chrX:35885507-35885693 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 109, 58

Conread position: 43-232
Cow position: chrX:38935504-38935315 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 16

Conread position: 43-232
Cow position: chrX:40574718-40574908 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 83

Conread position: 43-232
Cow position: chrX:40826525-40826717 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 174

Conread position: 43-232
Cow position: chrX:43050295-43050103 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 89, 136

Conread position: 43-232
Cow position: chrX:46023000-46022809 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 61, 169

Conread position: 43-233
Cow position: chrX:11454399-11454219 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 43-233
Cow position: chrX:24335851-24336044 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 60, 169

Conread position: 43-234
Cow position: chrX:34565510-34565318 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 74, 147

Conread position: 43-237
Cow position: chrX:2314393-2314590 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 158
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 61, 173

Conread position: 43-237
Cow position: chrX:10516479-10516282 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 160
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 61, 172

Conread position: 43-237
Cow position: chrX:11633907-11633711 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 152
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 60, 87

Conread position: 43-237
Cow position: chrX:40183129-40183325 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 134
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 60, 171

Conread position: 43-238
Cow position: chrX:5872557-5872345 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 61, 187

Conread position: 43-238
Cow position: chrX:11825418-11825616 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 58, 172

Conread position: 43-238
Cow position: chrX:18111604-18111406 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 61, 172

Conread position: 43-238
Cow position: chrX:19356689-19356497 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 158
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 60, 145

Conread position: 43-238
Cow position: chrX:24170500-24170701 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 163
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 60, 136

Conread position: 43-238
Cow position: chrX:25815674-25815873 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 155
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 60, 175

Conread position: 43-238
Cow position: chrX:27705812-27705614 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 159
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 35, 45

Conread position: 43-238
Cow position: chrX:29478947-29478752 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 157
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 60, 75

Conread position: 43-238
Cow position: chrX:33654618-33654816 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 155
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 60, 173

Conread position: 43-238
Cow position: chrX:35285399-35285201 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 174

Conread position: 43-238
Cow position: chrX:42246956-42247154 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 159
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 61, 173

Conread position: 43-238
Cow position: chrX:46588045-46587850 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 153
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 60, 51

Conread position: 43-239
Cow position: chrX:46910033-46909842 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 155
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 116, 31

Conread position: 43-241
Cow position: chrX:1960200-1960400 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 159
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 61, 68

Conread position: 43-241
Cow position: chrX:44995725-44995523 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 60, 175

Conread position: 43-242
Cow position: chrX:35269081-35268889 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 116, 31

Conread position: 43-245
Cow position: chrX:12290943-12290740 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 157
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 61, 74

Conread position: 43-280
Cow position: chrX:18030191-18030430 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 163
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 172

Conread position: 44-171
Cow position: chrX:10479974-10479843 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 109
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 59, 0

Conread position: 44-192
Cow position: chrX:4486800-4486951 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 80

Conread position: 44-201
Cow position: chrX:24749311-24749149 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 78, 56

Conread position: 44-202
Cow position: chrX:6480371-6480533 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 44-202
Cow position: chrX:11589143-11589304 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 114, 0

Conread position: 44-204
Cow position: chrX:3494826-3494984 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 59, 79

Conread position: 44-213
Cow position: chrX:23485754-23485573 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 44-214
Cow position: chrX:42539771-42539610 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 66

Conread position: 44-215
Cow position: chrX:19000351-19000176 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 44-223
Cow position: chrX:34270785-34270602 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 115, 0

Conread position: 44-226
Cow position: chrX:40649126-40648933 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 59, 179

Conread position: 44-229
Cow position: chrX:42760477-42760289 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 148
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 60, 172

Conread position: 44-231
Cow position: chrX:38642466-38642284 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 104, 37

Conread position: 44-232
Cow position: chrX:1122323-1122509 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 149
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 60, 22

Conread position: 44-232
Cow position: chrX:4612650-4612848 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 57, 22

Conread position: 44-232
Cow position: chrX:8327129-8326938 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 60, 172

Conread position: 44-232
Cow position: chrX:27074827-27075017 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 59, 71

Conread position: 44-232
Cow position: chrX:33001122-33000939 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 108, 56

Conread position: 44-232
Cow position: chrX:38302038-38301843 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 59, 175

Conread position: 44-236
Cow position: chrX:17956913-17956721 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 60, 84

Conread position: 44-236
Cow position: chrX:45598384-45598575 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 98, 56

Conread position: 44-237
Cow position: chrX:32877155-32877346 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 60, 25

Conread position: 44-237
Cow position: chrX:44192218-44192418 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 177

Conread position: 44-238
Cow position: chrX:1175766-1175954 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 59, 46

Conread position: 44-238
Cow position: chrX:11653991-11653792 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 157
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 108, 57

Conread position: 44-238
Cow position: chrX:12250039-12249839 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 108

Conread position: 44-238
Cow position: chrX:16323791-16323986 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 57, 163

Conread position: 44-238
Cow position: chrX:18204242-18204439 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 111, 25

Conread position: 44-238
Cow position: chrX:26843042-26843241 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 138
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 60, 174

Conread position: 44-238
Cow position: chrX:27393794-27393998 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 57, 25

Conread position: 44-238
Cow position: chrX:32330395-32330195 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 61, 174

Conread position: 44-238
Cow position: chrX:38218937-38218742 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 59, 79

Conread position: 44-238
Cow position: chrX:41878713-41878902 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 43, 33

Conread position: 44-239
Cow position: chrX:5097570-5097776 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 159
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 59, 22

Conread position: 44-242
Cow position: chrX:15006935-15007125 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 104, 57

Conread position: 45-210
Cow position: chrX:15100201-15100038 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 97, 42

Conread position: 45-215
Cow position: chrX:40556240-40556411 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 105, 59

Conread position: 45-226
Cow position: chrX:45759892-45759711 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 56

Conread position: 45-228
Cow position: chrX:37751888-37752068 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 114, 77

Conread position: 45-230
Cow position: chrX:43008833-43008645 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 59, 170

Conread position: 45-232
Cow position: chrX:15546104-15545916 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 59, 31

Conread position: 45-232
Cow position: chrX:30133101-30133284 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 59, 32

Conread position: 45-237
Cow position: chrX:29680024-29680232 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 184

Conread position: 45-238
Cow position: chrX:29601606-29601800 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 102, 55

Conread position: 45-242
Cow position: chrX:3806901-3806706 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 155
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 107, 54

Conread position: 46-215
Cow position: chrX:41363628-41363809 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 46-238
Cow position: chrX:15146977-15147165 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 84, 28

Conread position: 46-238
Cow position: chrX:36866395-36866201 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 160
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 170

Conread position: 46-247
Cow position: chrX:27415366-27415562 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 58, 41

Conread position: 48-231
Cow position: chrX:40685109-40685293 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 99, 59

Conread position: 48-238
Cow position: chrX:32318520-32318333 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 102, 28

Conread position: 49-198
Cow position: chrX:45044673-45044519 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 49-232
Cow position: chrX:46533085-46533271 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 55, 174

Conread position: 49-238
Cow position: chrX:4645695-4645885 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 150
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 55, 85

Conread position: 49-238
Cow position: chrX:45875609-45875420 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 55, 25

Conread position: 51-222
Cow position: chrX:44225513-44225687 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 165

Conread position: 51-226
Cow position: chrX:27460085-27459905 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 167

Conread position: 51-230
Cow position: chrX:20345668-20345487 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 53, 162

Conread position: 51-232
Cow position: chrX:30922389-30922205 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 164

Conread position: 51-232
Cow position: chrX:34544003-34543818 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 145
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 31, 166

Conread position: 51-238
Cow position: chrX:7648195-7648382 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 103

Conread position: 51-238
Cow position: chrX:34420953-34420762 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 150
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 52, 166

Conread position: 51-244
Cow position: chrX:13868921-13868724 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 53, 75

Conread position: 52-195
Cow position: chrX:39094117-39094252 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 52-198
Cow position: chrX:11813290-11813140 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 52-215
Cow position: chrX:10237697-10237863 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 133
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 53, 85

Conread position: 52-229
Cow position: chrX:31986356-31986537 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 146
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 52, 83

Conread position: 52-232
Cow position: chrX:8731310-8731128 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 52, 156

Conread position: 52-236
Cow position: chrX:28837100-28836924 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 52, 22

Conread position: 52-238
Cow position: chrX:1360298-1360113 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 107, 55

Conread position: 52-238
Cow position: chrX:10831265-10831462 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 155
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 51, 125

Conread position: 52-238
Cow position: chrX:41809959-41810140 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 107, 55

Conread position: 52-254
Cow position: chrX:27228345-27228138 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 161
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 52, 166

Conread position: 53-228
Cow position: chrX:34238938-34238757 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 165

Conread position: 53-236
Cow position: chrX:32420426-32420242 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 51, 81

Conread position: 53-238
Cow position: chrX:4278904-4279090 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 33, 7

Conread position: 56-232
Cow position: chrX:36722601-36722771 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 92, 43

Conread position: 56-237
Cow position: chrX:24105052-24104868 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 159

Conread position: 56-238
Cow position: chrX:12309173-12309358 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 48, 157

Conread position: 57-222
Cow position: chrX:25048891-25049058 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 101, 46

Conread position: 61-228
Cow position: chrX:19795302-19795466 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 126, 39

Conread position: 61-232
Cow position: chrX:34662641-34662812 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 43, 11

Conread position: 61-238
Cow position: chrX:22822262-22822074 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 43, 163

Conread position: 61-238
Cow position: chrX:28877959-28878146 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 147
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 39, 163

Conread position: 66-232
Cow position: chrX:1055179-1055347 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 68

Conread position: 66-232
Cow position: chrX:19965193-19965362 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 149

Conread position: 66-238
Cow position: chrX:46770760-46770935 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 147

Conread position: 66-251
Cow position: chrX:34222915-34222731 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 146
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 63

Conread position: 69-234
Cow position: chrX:31294370-31294540 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 137
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 35, 149

Conread position: 72-238
Cow position: chrX:23188593-23188752 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 86, 29

Conread position: 74-243
Cow position: chrX:39180039-39180210 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 137
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 30, 141

Conread position: 77-225
Cow position: chrX:31252599-31252449 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 27, 98

Conread position: 91-224
Cow position: chrX:23185372-23185503 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 13, 69

Conread position: 100-238
Cow position: chrX:6278330-6278470 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 52, 122

Conread position: 100-238
Cow position: chrX:37062416-37062557 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 51, 116

Conread position: 103-238
Cow position: chrX:16575277-16575140 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 55, 119

Conread position: 103-238
Cow position: chrX:33204804-33204941 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 55, 112

Conread position: 104-238
Cow position: chrX:14599696-14599565 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 44, 99

Conread position: 105-214
Cow position: chrX:7107664-7107553 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 23

Conread position: 105-228
Cow position: chrX:43730061-43730186 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 110

Conread position: 105-232
Cow position: chrX:44754222-44754346 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 105-237
Cow position: chrX:37129432-37129298 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 54, 110

Conread position: 105-238
Cow position: chrX:20743768-20743632 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 18, 111

Conread position: 105-238
Cow position: chrX:38226947-38227079 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 54, 97

Conread position: 105-250
Cow position: chrX:23574816-23574671 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 87

Conread position: 106-231
Cow position: chrX:27667588-27667460 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 7, 110

Conread position: 106-242
Cow position: chrX:46433652-46433515 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 49, 28

Conread position: 108-232
Cow position: chrX:31373696-31373570 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 104

Conread position: 108-238
Cow position: chrX:33640135-33640003 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 107

Conread position: 108-242
Cow position: chrX:47342275-47342140 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 51, 106

Conread position: 115-238
Cow position: chrX:38728887-38728762 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 48, 100

Conread position: 117-232
Cow position: chrX:22914891-22915006 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 96

Conread position: 125-236
Cow position: chrX:10076114-10076001 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 34, 91

Conread position: 321-480
Cow position: chrX:6640099-6639943 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 54, 20

Conread position: 338-480
Cow position: chrX:26625717-26625859 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 71, 47

Conread position: 339-473
Cow position: chrX:21672508-21672376 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 339-512
Cow position: chrX:4043902-4044067 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 143, 39

Conread position: 340-470
Cow position: chrX:46433442-46433310 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 340-476
Cow position: chrX:37843674-37843542 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 99, 0

Conread position: 340-480
Cow position: chrX:12309434-12309571 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 340-480
Cow position: chrX:14599484-14599347 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 340-480
Cow position: chrX:36283303-36283163 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 340-480
Cow position: chrX:37836540-37836405 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 340-480
Cow position: chrX:38967599-38967468 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 340-480
Cow position: chrX:48195086-48195223 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 50, 72

Conread position: 340-492
Cow position: chrX:40647937-40647783 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 62, 45

Conread position: 341-479
Cow position: chrX:13382280-13382144 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 114
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 42, 0

Conread position: 341-480
Cow position: chrX:11633630-11633496 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 341-480
Cow position: chrX:40809639-40809504 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 98, 0

Conread position: 341-492
Cow position: chrX:35284570-35284429 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 343-446
Cow position: chrX:12405435-12405539 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 343-471
Cow position: chrX:22387294-22387421 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 103, 40

Conread position: 343-475
Cow position: chrX:8731035-8730902 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 73, 40

Conread position: 343-476
Cow position: chrX:36061106-36060973 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 343-477
Cow position: chrX:46722786-46722920 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 343-478
Cow position: chrX:678618-678748 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 343-478
Cow position: chrX:14924949-14924819 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 343-478
Cow position: chrX:34441503-34441632 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 343-478
Cow position: chrX:43730270-43730395 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 343-479
Cow position: chrX:11856377-11856247 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 343-479
Cow position: chrX:31489468-31489330 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 103
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 343-480
Cow position: chrX:1616096-1616230 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 343-480
Cow position: chrX:6234504-6234631 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 343-480
Cow position: chrX:11656040-11655906 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 343-480
Cow position: chrX:20339941-20340073 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 343-480
Cow position: chrX:23785610-23785471 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 118
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 44, 0

Conread position: 343-480
Cow position: chrX:27174944-27174813 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 343-480
Cow position: chrX:29509493-29509626 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 83, 0

Conread position: 343-480
Cow position: chrX:29542271-29542401 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 343-480
Cow position: chrX:32820978-32820847 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 343-480
Cow position: chrX:33000851-33000721 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 113
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 343-480
Cow position: chrX:34401946-34401815 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 112, 39

Conread position: 343-480
Cow position: chrX:34543736-34543605 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 343-480
Cow position: chrX:35387954-35388088 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 343-480
Cow position: chrX:38439426-38439292 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 343-480
Cow position: chrX:41167016-41167147 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 343-480
Cow position: chrX:41403927-41403790 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 343-480
Cow position: chrX:41410475-41410338 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 343-480
Cow position: chrX:42461796-42461928 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 343-480
Cow position: chrX:43527458-43527321 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 28, 89

Conread position: 343-480
Cow position: chrX:45403879-45404016 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 343-492
Cow position: chrX:1499615-1499475 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 343-492
Cow position: chrX:5872269-5872119 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 343-492
Cow position: chrX:47484317-47484466 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 343-502
Cow position: chrX:2467834-2467673 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 139, 155

Conread position: 343-502
Cow position: chrX:10831545-10831703 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 150, 43

Conread position: 343-502
Cow position: chrX:29601882-29602037 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 127
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 343-503
Cow position: chrX:41238403-41238573 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 343-503
Cow position: chrX:43049297-43049136 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 139, 42

Conread position: 343-516
Cow position: chrX:8797201-8797027 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 63, 40

Conread position: 343-560
Cow position: chrX:41743860-41743645 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 150, 40

Conread position: 344-481
Cow position: chrX:7863619-7863754 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 344-492
Cow position: chrX:7382281-7382129 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 29, 90

Conread position: 344-492
Cow position: chrX:15596991-15596843 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 345-478
Cow position: chrX:19188884-19188756 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 345-478
Cow position: chrX:40116367-40116241 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 345-478
Cow position: chrX:42855361-42855228 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 112
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 345-480
Cow position: chrX:151851-151719 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 345-480
Cow position: chrX:7718802-7718672 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 345-480
Cow position: chrX:16324018-16324146 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 345-480
Cow position: chrX:16541725-16541860 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 345-480
Cow position: chrX:17662647-17662779 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 345-480
Cow position: chrX:19019160-19019293 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 33, 59

Conread position: 345-480
Cow position: chrX:21593234-21593101 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 112
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 345-480
Cow position: chrX:23514069-23514201 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 112, 40

Conread position: 345-480
Cow position: chrX:23563844-23563979 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 345-480
Cow position: chrX:26440832-26440962 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 345-480
Cow position: chrX:30832901-30833028 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 345-480
Cow position: chrX:34502868-34502736 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 37, 0

Conread position: 345-480
Cow position: chrX:35609935-35609804 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 345-480
Cow position: chrX:37781165-37781300 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 67, 40

Conread position: 345-480
Cow position: chrX:38218656-38218525 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 345-480
Cow position: chrX:42874930-42874795 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 112
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 345-492
Cow position: chrX:36961589-36961441 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 42, 0

Conread position: 345-503
Cow position: chrX:37541071-37540918 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 142, 73

Conread position: 345-507
Cow position: chrX:32020173-32020334 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 137, 83

Conread position: 345-507
Cow position: chrX:40183397-40183562 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 137, 153

Conread position: 345-516
Cow position: chrX:17794929-17794764 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 137, 37

Conread position: 346-480
Cow position: chrX:40567552-40567417 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 347-469
Cow position: chrX:4399073-4398954 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 347-480
Cow position: chrX:31442877-31443004 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 347-480
Cow position: chrX:40452265-40452395 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 347-601
Cow position: chrX:42492569-42492821 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 177
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 146, 28

Conread position: 350-480
Cow position: chrX:36778353-36778225 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 0

Show alignments to all cow chromosomes.