Cow genome map

Conread name: Thy1-THY010009E11

Conread position: 45-272
Cow position: chr14:24387612-24387369 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 48-275
Cow position: chr14:34984024-34983792 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 35, 15

Conread position: 51-275
Cow position: chr14:4991163-4990927 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 56-285
Cow position: chr14:11285735-11285495 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 169
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 5, 66

Conread position: 70-261
Cow position: chr14:25403798-25403996 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 13, 45

Conread position: 70-272
Cow position: chr14:8541073-8541283 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 15, 202

Conread position: 80-282
Cow position: chr14:33247303-33247511 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 82-202
Cow position: chr14:33828287-33828163 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 82-242
Cow position: chr14:3564408-3564241 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 82-246
Cow position: chr14:22966879-22966709 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 59, 0

Conread position: 82-248
Cow position: chr14:41128021-41127855 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 59, 106

Conread position: 82-255
Cow position: chr14:41302706-41302885 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 82-259
Cow position: chr14:12127285-12127469 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 82-268
Cow position: chr14:1977944-1978141 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 82-270
Cow position: chr14:12035534-12035340 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 53, 109

Conread position: 82-270
Cow position: chr14:49021776-49021968 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 149
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 57, 42

Conread position: 82-271
Cow position: chr14:11056613-11056801 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 133, 51

Conread position: 82-271
Cow position: chr14:18309170-18309378 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 52, 0

Conread position: 82-271
Cow position: chr14:24981581-24981388 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 57, 118

Conread position: 82-271
Cow position: chr14:37447343-37447534 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 46, 33

Conread position: 82-271
Cow position: chr14:38921076-38920881 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 36

Conread position: 82-272
Cow position: chr14:8786425-8786618 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 50, 117

Conread position: 82-275
Cow position: chr14:42437152-42436950 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 157
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 52, 102

Conread position: 82-281
Cow position: chr14:28115059-28115267 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 51, 161

Conread position: 82-283
Cow position: chr14:34199722-34199926 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 141
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 113, 59

Conread position: 82-284
Cow position: chr14:19863306-19863518 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 163
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 50, 0

Conread position: 82-285
Cow position: chr14:4202967-4203183 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 82-288
Cow position: chr14:27275288-27275075 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 27, 127

Conread position: 84-246
Cow position: chr14:29029954-29029782 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 84-271
Cow position: chr14:8923459-8923655 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 24

Conread position: 87-288
Cow position: chr14:12954261-12954470 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 30, 16

Conread position: 89-257
Cow position: chr14:41180589-41180771 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 158

Conread position: 89-261
Cow position: chr14:5630281-5630101 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 89-276
Cow position: chr14:50362915-50362718 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 44, 0

Conread position: 89-277
Cow position: chr14:21535202-21535383 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 108, 28

Conread position: 91-259
Cow position: chr14:23478938-23478768 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 37, 26

Conread position: 91-261
Cow position: chr14:50055509-50055338 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 104, 61

Conread position: 91-268
Cow position: chr14:40165541-40165357 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 43, 97

Conread position: 91-269
Cow position: chr14:26097574-26097762 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 91-270
Cow position: chr14:33309389-33309573 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 36, 0

Conread position: 91-271
Cow position: chr14:13810055-13809869 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 91-271
Cow position: chr14:14622062-14622247 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 42, 98

Conread position: 91-271
Cow position: chr14:16834443-16834251 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 91-271
Cow position: chr14:17841171-17841362 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 160

Conread position: 91-271
Cow position: chr14:19594012-19594208 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 91-271
Cow position: chr14:20016587-20016778 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 91-271
Cow position: chr14:47672769-47672952 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 41, 84

Conread position: 91-272
Cow position: chr14:22941604-22941800 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 91-272
Cow position: chr14:33830414-33830230 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 122, 0

Conread position: 91-272
Cow position: chr14:37422670-37422854 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 113

Conread position: 91-275
Cow position: chr14:1859498-1859687 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 43, 23

Conread position: 91-275
Cow position: chr14:4282390-4282581 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 151
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 42, 111

Conread position: 91-275
Cow position: chr14:20712572-20712762 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 42, 91

Conread position: 91-275
Cow position: chr14:21933223-21933418 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 43, 13

Conread position: 91-275
Cow position: chr14:46654426-46654616 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 81

Conread position: 91-276
Cow position: chr14:19129627-19129430 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 152
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 42, 0

Conread position: 91-285
Cow position: chr14:12244264-12244470 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 91-285
Cow position: chr14:28378478-28378274 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 91-285
Cow position: chr14:35503482-35503275 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 91-285
Cow position: chr14:40754126-40754332 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 24, 168

Conread position: 91-288
Cow position: chr14:1796308-1796105 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 42, 94

Conread position: 91-288
Cow position: chr14:14317000-14316799 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 45, 99

Conread position: 92-270
Cow position: chr14:36555041-36555216 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 22

Conread position: 92-271
Cow position: chr14:8101907-8101722 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 44, 109

Conread position: 92-272
Cow position: chr14:29965134-29964948 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 44, 29

Conread position: 92-275
Cow position: chr14:6226510-6226688 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 118

Conread position: 92-282
Cow position: chr14:44084361-44084571 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 92-283
Cow position: chr14:12511784-12511979 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 46, 94

Conread position: 92-285
Cow position: chr14:33341873-33341675 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 154

Conread position: 92-285
Cow position: chr14:37883797-37884001 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 155
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 37, 0

Conread position: 92-285
Cow position: chr14:42419157-42419358 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 93-271
Cow position: chr14:6541608-6541797 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 146
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 93-271
Cow position: chr14:7695383-7695195 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 42, 0

Conread position: 93-275
Cow position: chr14:35420647-35420839 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 40, 167

Conread position: 93-277
Cow position: chr14:4877116-4877306 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 41, 107

Conread position: 93-285
Cow position: chr14:12634771-12634966 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 42, 52

Conread position: 93-285
Cow position: chr14:18763328-18763519 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 151
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 102, 47

Conread position: 93-287
Cow position: chr14:23424373-23424174 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 40, 111

Conread position: 93-287
Cow position: chr14:23443134-23442935 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 40, 111

Conread position: 94-261
Cow position: chr14:20384870-20385046 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 94-270
Cow position: chr14:33456926-33457113 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 94-272
Cow position: chr14:38143994-38144179 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 146
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 40, 0

Conread position: 94-285
Cow position: chr14:47511072-47510875 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 18

Conread position: 95-293
Cow position: chr14:15039497-15039705 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 38, 83

Conread position: 96-275
Cow position: chr14:1868272-1868458 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 34, 158

Conread position: 98-271
Cow position: chr14:46998147-46997967 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 144
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 44, 0

Conread position: 102-272
Cow position: chr14:12520198-12520374 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 102-285
Cow position: chr14:803794-803601 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 102-288
Cow position: chr14:34331218-34331414 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 103-270
Cow position: chr14:25824795-25824626 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 92, 24

Conread position: 108-275
Cow position: chr14:3943452-3943625 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 34, 0

Conread position: 109-274
Cow position: chr14:48900276-48900102 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 6, 85

Conread position: 124-285
Cow position: chr14:34399716-34399883 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 126-272
Cow position: chr14:20481765-20481912 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 133-285
Cow position: chr14:28924239-28924083 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 133-285
Cow position: chr14:34448900-34449056 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 62, 0

Show alignments to all cow chromosomes.