Cow genome map
| Conread name: | Thy1-THY010009E11 |
| Conread position: | 34-271 |
| Cow position: | chr16:8025979-8025741 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 161, 29 |
| Conread position: | 60-288 |
| Cow position: | chr16:34754069-34753829 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 16 |
| Conread position: | 69-275 |
| Cow position: | chr16:30359159-30358945 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 69-288 |
| Cow position: | chr16:8768704-8768922 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 16, 118 |
| Conread position: | 70-276 |
| Cow position: | chr16:25839521-25839739 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 5 |
| Conread position: | 75-274 |
| Cow position: | chr16:12633795-12634001 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 76-247 |
| Cow position: | chr16:39646454-39646634 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 57, 166 |
| Conread position: | 76-259 |
| Cow position: | chr16:52889501-52889310 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 7, 34 |
| Conread position: | 77-275 |
| Cow position: | chr16:10032550-10032756 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 52, 195 |
| Conread position: | 80-261 |
| Cow position: | chr16:16402407-16402230 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 61, 109 |
| Conread position: | 80-285 |
| Cow position: | chr16:12501250-12501033 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 80-288 |
| Cow position: | chr16:51246861-51247065 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 53, 122 |
| Conread position: | 82-248 |
| Cow position: | chr16:11775133-11774957 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 82-252 |
| Cow position: | chr16:30143289-30143104 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 82-259 |
| Cow position: | chr16:14758649-14758837 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 51, 124 |
| Conread position: | 82-261 |
| Cow position: | chr16:12361061-12360869 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 82-261 |
| Cow position: | chr16:53627512-53627324 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 82-270 |
| Cow position: | chr16:23472663-23472861 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 51, 186 |
| Conread position: | 82-271 |
| Cow position: | chr16:18205876-18206073 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 64 |
| Conread position: | 82-271 |
| Cow position: | chr16:43801003-43800805 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 50, 80 |
| Conread position: | 82-272 |
| Cow position: | chr16:29766253-29766441 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 48, 80 |
| Conread position: | 82-272 |
| Cow position: | chr16:41530375-41530185 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 115, 50 |
| Conread position: | 82-272 |
| Cow position: | chr16:53509067-53508870 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 82-275 |
| Cow position: | chr16:820164-820372 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 82-275 |
| Cow position: | chr16:14754407-14754205 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 82-275 |
| Cow position: | chr16:35188170-35188367 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 51, 152 |
| Conread position: | 82-275 |
| Cow position: | chr16:51112961-51112762 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 43, 96 |
| Conread position: | 82-276 |
| Cow position: | chr16:15370598-15370805 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 82-281 |
| Cow position: | chr16:7498976-7499174 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 57, 72 |
| Conread position: | 82-283 |
| Cow position: | chr16:52133597-52133392 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 60, 190 |
| Conread position: | 82-285 |
| Cow position: | chr16:43308646-43308435 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 50, 94 |
| Conread position: | 82-285 |
| Cow position: | chr16:56082447-56082237 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 82-287 |
| Cow position: | chr16:13578946-13578731 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 87-269 |
| Cow position: | chr16:50667206-50667403 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 87-271 |
| Cow position: | chr16:1220262-1220065 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 88-271 |
| Cow position: | chr16:41689618-41689807 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 88-275 |
| Cow position: | chr16:38243740-38243545 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 45, 95 |
| Conread position: | 89-260 |
| Cow position: | chr16:4699058-4698885 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 53, 18 |
| Conread position: | 89-261 |
| Cow position: | chr16:52275208-52275025 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 89-269 |
| Cow position: | chr16:43105590-43105404 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 44, 25 |
| Conread position: | 89-271 |
| Cow position: | chr16:570991-570806 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 52, 79 |
| Conread position: | 89-272 |
| Cow position: | chr16:43674797-43674989 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 44, 33 |
| Conread position: | 89-275 |
| Cow position: | chr16:8076585-8076384 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 90-269 |
| Cow position: | chr16:17982218-17982031 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 43, 106 |
| Conread position: | 91-236 |
| Cow position: | chr16:19047511-19047355 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 91-259 |
| Cow position: | chr16:13611529-13611352 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 91-261 |
| Cow position: | chr16:36121055-36120879 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 91-262 |
| Cow position: | chr16:33869836-33869660 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 91-266 |
| Cow position: | chr16:38091300-38091114 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 91-268 |
| Cow position: | chr16:18757915-18757728 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 42, 80 |
| Conread position: | 91-269 |
| Cow position: | chr16:20025371-20025553 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 41, 108 |
| Conread position: | 91-269 |
| Cow position: | chr16:56831812-56831630 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 39, 158 |
| Conread position: | 91-270 |
| Cow position: | chr16:3246280-3246092 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 91-271 |
| Cow position: | chr16:9830371-9830558 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 46, 145 |
| Conread position: | 91-271 |
| Cow position: | chr16:17142863-17143048 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 91-271 |
| Cow position: | chr16:23955906-23955718 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 91-271 |
| Cow position: | chr16:30037067-30036877 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 42, 102 |
| Conread position: | 91-271 |
| Cow position: | chr16:42242191-42242004 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 45, 136 |
| Conread position: | 91-271 |
| Cow position: | chr16:42340120-42340310 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 91-271 |
| Cow position: | chr16:43505878-43505696 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 44, 91 |
| Conread position: | 91-272 |
| Cow position: | chr16:10945506-10945326 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 82, 41 |
| Conread position: | 91-272 |
| Cow position: | chr16:25380569-25380380 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 91-272 |
| Cow position: | chr16:31348843-31348651 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 91-272 |
| Cow position: | chr16:35623317-35623135 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 43, 13 |
| Conread position: | 91-272 |
| Cow position: | chr16:50282501-50282317 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 104, 50 |
| Conread position: | 91-272 |
| Cow position: | chr16:56670996-56670804 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 47, 28 |
| Conread position: | 91-275 |
| Cow position: | chr16:4910602-4910407 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 91-275 |
| Cow position: | chr16:4911504-4911328 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 37, 87 |
| Conread position: | 91-275 |
| Cow position: | chr16:10039920-10039729 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 42, 166 |
| Conread position: | 91-275 |
| Cow position: | chr16:14685465-14685272 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 91-275 |
| Cow position: | chr16:20476462-20476653 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 23, 52 |
| Conread position: | 91-275 |
| Cow position: | chr16:21905088-21905264 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 41, 87 |
| Conread position: | 91-275 |
| Cow position: | chr16:44428804-44429001 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 91-275 |
| Cow position: | chr16:54226674-54226482 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 40, 113 |
| Conread position: | 91-275 |
| Cow position: | chr16:56796741-56796548 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 91-280 |
| Cow position: | chr16:54734170-54734359 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 104, 42 |
| Conread position: | 91-284 |
| Cow position: | chr16:56565522-56565723 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 91-285 |
| Cow position: | chr16:7549891-7550094 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 36, 142 |
| Conread position: | 91-285 |
| Cow position: | chr16:8522468-8522262 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 38, 107 |
| Conread position: | 91-285 |
| Cow position: | chr16:10773057-10773248 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 43, 93 |
| Conread position: | 91-285 |
| Cow position: | chr16:37452691-37452486 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 41, 169 |
| Conread position: | 91-285 |
| Cow position: | chr16:42633826-42633616 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 42, 86 |
| Conread position: | 91-285 |
| Cow position: | chr16:49169460-49169253 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 91-287 |
| Cow position: | chr16:18141404-18141199 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 42, 175 |
| Conread position: | 91-288 |
| Cow position: | chr16:8933499-8933297 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 46, 110 |
| Conread position: | 91-288 |
| Cow position: | chr16:11957659-11957448 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 38, 197 |
| Conread position: | 91-288 |
| Cow position: | chr16:24825996-24826204 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 91-288 |
| Cow position: | chr16:42734091-42733880 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 91-288 |
| Cow position: | chr16:46552731-46552924 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 106, 19 |
| Conread position: | 91-288 |
| Cow position: | chr16:47854868-47855069 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 42, 11 |
| Conread position: | 92-211 |
| Cow position: | chr16:15752629-15752752 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 92-257 |
| Cow position: | chr16:38905303-38905134 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 92-259 |
| Cow position: | chr16:11102897-11102720 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 45, 169 |
| Conread position: | 92-268 |
| Cow position: | chr16:27160940-27160753 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 92-270 |
| Cow position: | chr16:44683736-44683544 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 92-271 |
| Cow position: | chr16:8323057-8322869 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 41, 172 |
| Conread position: | 92-271 |
| Cow position: | chr16:13969446-13969253 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 39, 83 |
| Conread position: | 92-271 |
| Cow position: | chr16:14242296-14242482 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 100 |
| Conread position: | 92-271 |
| Cow position: | chr16:42539664-42539475 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 92-271 |
| Cow position: | chr16:48385475-48385289 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 49, 111 |
| Conread position: | 92-272 |
| Cow position: | chr16:33267642-33267833 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 49, 75 |
| Conread position: | 92-274 |
| Cow position: | chr16:45299999-45299811 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 92-275 |
| Cow position: | chr16:7619252-7619067 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 41, 100 |
| Conread position: | 92-285 |
| Cow position: | chr16:29557702-29557497 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 92-285 |
| Cow position: | chr16:45609916-45610113 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 41, 84 |
| Conread position: | 92-288 |
| Cow position: | chr16:32132451-32132637 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 122, 33 |
| Conread position: | 92-288 |
| Cow position: | chr16:50289075-50289281 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 44, 166 |
| Conread position: | 92-326 |
| Cow position: | chr16:48545746-48545991 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 40, 218 |
| Conread position: | 93-271 |
| Cow position: | chr16:8273911-8273724 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 93-272 |
| Cow position: | chr16:39165168-39165354 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 39, 80 |
| Conread position: | 93-275 |
| Cow position: | chr16:6319127-6319321 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 93-275 |
| Cow position: | chr16:15960365-15960172 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 93-275 |
| Cow position: | chr16:17626857-17627047 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 40, 170 |
| Conread position: | 93-276 |
| Cow position: | chr16:2223475-2223278 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 93-277 |
| Cow position: | chr16:11082929-11083117 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 40, 140 |
| Conread position: | 93-280 |
| Cow position: | chr16:8017894-8018091 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 93-285 |
| Cow position: | chr16:7665563-7665765 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 94-268 |
| Cow position: | chr16:22804671-22804487 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 37, 72 |
| Conread position: | 94-270 |
| Cow position: | chr16:50931589-50931411 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 38, 109 |
| Conread position: | 94-271 |
| Cow position: | chr16:4399664-4399849 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 94-271 |
| Cow position: | chr16:26373021-26372837 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 94-285 |
| Cow position: | chr16:22984685-22984881 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 33, 90 |
| Conread position: | 94-285 |
| Cow position: | chr16:32302077-32301878 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 95-270 |
| Cow position: | chr16:8448719-8448542 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 41, 73 |
| Conread position: | 95-271 |
| Cow position: | chr16:14974606-14974430 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 120, 101 |
| Conread position: | 95-275 |
| Cow position: | chr16:54664872-54664681 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 37, 114 |
| Conread position: | 95-283 |
| Cow position: | chr16:19670421-19670227 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 95-283 |
| Cow position: | chr16:50688450-50688647 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 95-285 |
| Cow position: | chr16:4192496-4192306 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 38, 91 |
| Conread position: | 95-288 |
| Cow position: | chr16:21317669-21317462 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 96-275 |
| Cow position: | chr16:17135657-17135842 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 43, 105 |
| Conread position: | 96-275 |
| Cow position: | chr16:46430223-46430035 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 27, 110 |
| Conread position: | 97-274 |
| Cow position: | chr16:42433185-42432994 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 98-271 |
| Cow position: | chr16:18354025-18353844 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 36, 94 |
| Conread position: | 98-288 |
| Cow position: | chr16:13306936-13306741 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 41, 63 |
| Conread position: | 99-270 |
| Cow position: | chr16:56875722-56875552 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 101, 32 |
| Conread position: | 100-290 |
| Cow position: | chr16:10365852-10366057 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 34, 110 |
| Conread position: | 102-271 |
| Cow position: | chr16:8206130-8205971 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 79, 36 |
| Conread position: | 102-272 |
| Cow position: | chr16:8315255-8315079 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 35, 97 |
| Conread position: | 102-272 |
| Cow position: | chr16:8441868-8441693 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 31, 12 |
| Conread position: | 103-285 |
| Cow position: | chr16:38663773-38663583 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 104-279 |
| Cow position: | chr16:11359095-11359272 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 92, 28 |
| Conread position: | 105-272 |
| Cow position: | chr16:13712994-13712818 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 107-288 |
| Cow position: | chr16:33530353-33530540 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 109-271 |
| Cow position: | chr16:42444100-42444269 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 164 |
| Conread position: | 121-288 |
| Cow position: | chr16:8438694-8438521 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 124-285 |
| Cow position: | chr16:20647885-20648040 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 71, 87 |
| Conread position: | 125-291 |
| Cow position: | chr16:15953858-15953685 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 17, 144 |
| Conread position: | 126-288 |
| Cow position: | chr16:44713517-44713349 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 127-275 |
| Cow position: | chr16:9578524-9578374 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 70, 6 |
| Conread position: | 133-261 |
| Cow position: | chr16:11390876-11391009 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 36, 8 |
| Conread position: | 134-275 |
| Cow position: | chr16:7812663-7812808 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 137-277 |
| Cow position: | chr16:51697059-51697205 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 138-275 |
| Cow position: | chr16:1415321-1415185 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 73, 54 |
| Conread position: | 138-285 |
| Cow position: | chr16:13531790-13531935 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 79, 25 |
| Conread position: | 139-275 |
| Cow position: | chr16:29655303-29655443 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 140-274 |
| Cow position: | chr16:39202119-39202256 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 12 |
| Conread position: | 144-271 |
| Cow position: | chr16:50286496-50286626 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 56, 38 |
Show alignments to all cow chromosomes.