Cow genome map

Conread name: Thy1-THY010009E11

Conread position: 69-270
Cow position: chr20:33067419-33067205 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 64, 11

Conread position: 71-271
Cow position: chr20:34108060-34108261 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 85, 9

Conread position: 75-271
Cow position: chr20:11359679-11359476 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 163
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 13, 92

Conread position: 76-270
Cow position: chr20:36633771-36633967 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 56, 71

Conread position: 76-275
Cow position: chr20:11482184-11481975 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 12, 170

Conread position: 76-282
Cow position: chr20:33532258-33532470 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 80-279
Cow position: chr20:6890671-6890872 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 154

Conread position: 82-246
Cow position: chr20:24000839-24000665 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 82-258
Cow position: chr20:23506511-23506326 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 51, 0

Conread position: 82-261
Cow position: chr20:14759702-14759519 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 57, 49

Conread position: 82-269
Cow position: chr20:16548319-16548124 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 48, 0

Conread position: 82-271
Cow position: chr20:7442169-7441982 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 151
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 131, 114

Conread position: 82-271
Cow position: chr20:10772162-10772361 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 52, 0

Conread position: 82-271
Cow position: chr20:33144594-33144397 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 82-271
Cow position: chr20:39728407-39728607 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 51, 155

Conread position: 82-272
Cow position: chr20:5078582-5078784 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 82-272
Cow position: chr20:6240563-6240364 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 82-272
Cow position: chr20:20898632-20898433 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 52, 35

Conread position: 82-272
Cow position: chr20:20983955-20984149 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 113, 0

Conread position: 82-272
Cow position: chr20:42458891-42458699 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 115, 49

Conread position: 82-275
Cow position: chr20:11188840-11188647 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 151
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 50, 114

Conread position: 82-275
Cow position: chr20:15568987-15568789 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 50, 36

Conread position: 82-275
Cow position: chr20:19751266-19751467 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 58, 0

Conread position: 82-275
Cow position: chr20:35192736-35192925 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 134
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 113, 51

Conread position: 82-275
Cow position: chr20:35907093-35906890 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 103, 0

Conread position: 82-277
Cow position: chr20:23064872-23064673 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 50, 119

Conread position: 82-279
Cow position: chr20:12996052-12995842 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 52, 0

Conread position: 82-284
Cow position: chr20:15565867-15565660 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 158
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 57, 0

Conread position: 82-284
Cow position: chr20:17251674-17251886 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 51, 105

Conread position: 86-272
Cow position: chr20:7709823-7709624 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 41, 71

Conread position: 88-275
Cow position: chr20:3141540-3141733 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 42, 184

Conread position: 88-288
Cow position: chr20:42469726-42469932 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 47, 16

Conread position: 90-278
Cow position: chr20:29845016-29845213 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 152
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 43, 167

Conread position: 91-262
Cow position: chr20:35797576-35797756 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 42, 113

Conread position: 91-265
Cow position: chr20:12085457-12085287 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 124, 39

Conread position: 91-269
Cow position: chr20:22484830-22485013 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 39, 88

Conread position: 91-270
Cow position: chr20:9433553-9433742 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 91-270
Cow position: chr20:16492039-16492228 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 148
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 41, 0

Conread position: 91-270
Cow position: chr20:20099629-20099445 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 62

Conread position: 91-271
Cow position: chr20:6603007-6603197 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 80

Conread position: 91-271
Cow position: chr20:11135795-11135597 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 91-271
Cow position: chr20:28594250-28594443 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 47, 174

Conread position: 91-271
Cow position: chr20:34777147-34777336 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 91-272
Cow position: chr20:5636451-5636638 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 91-272
Cow position: chr20:10200310-10200503 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 91-272
Cow position: chr20:39962543-39962732 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 46, 167

Conread position: 91-272
Cow position: chr20:40511791-40511599 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 70

Conread position: 91-272
Cow position: chr20:40781935-40782118 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 104, 33

Conread position: 91-275
Cow position: chr20:6096526-6096335 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 91-275
Cow position: chr20:20739319-20739127 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 42, 85

Conread position: 91-275
Cow position: chr20:21345395-21345593 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 157
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 91-275
Cow position: chr20:21428127-21428319 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 161

Conread position: 91-275
Cow position: chr20:29805694-29805499 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 40, 149

Conread position: 91-275
Cow position: chr20:40127368-40127183 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 77, 41

Conread position: 91-275
Cow position: chr20:40157868-40158060 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 91-279
Cow position: chr20:4334557-4334365 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 44, 18

Conread position: 91-283
Cow position: chr20:33976449-33976648 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 33, 130

Conread position: 91-285
Cow position: chr20:9267138-9266937 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 37, 11

Conread position: 91-285
Cow position: chr20:24711803-24712011 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 91-288
Cow position: chr20:9376436-9376643 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 86

Conread position: 91-288
Cow position: chr20:18392293-18392098 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 48, 56

Conread position: 91-288
Cow position: chr20:38514749-38514951 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 158

Conread position: 91-288
Cow position: chr20:39398453-39398654 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 106, 0

Conread position: 92-261
Cow position: chr20:21928874-21929051 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 92-268
Cow position: chr20:38551342-38551517 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 47, 152

Conread position: 92-269
Cow position: chr20:746915-747096 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 92-271
Cow position: chr20:1576061-1576253 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 87

Conread position: 92-275
Cow position: chr20:354928-354741 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 42, 98

Conread position: 92-275
Cow position: chr20:5814537-5814726 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 92-281
Cow position: chr20:4755863-4755667 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 93-213
Cow position: chr20:13794956-13795076 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 103

Conread position: 93-252
Cow position: chr20:34001423-34001253 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 40, 145

Conread position: 93-259
Cow position: chr20:6423941-6424112 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 41, 97

Conread position: 93-259
Cow position: chr20:11741331-11741161 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 93-265
Cow position: chr20:33439006-33438830 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 20

Conread position: 93-272
Cow position: chr20:580953-580763 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 6

Conread position: 93-272
Cow position: chr20:16941321-16941131 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 39, 97

Conread position: 93-275
Cow position: chr20:4945277-4945094 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 40, 24

Conread position: 93-275
Cow position: chr20:42197289-42197473 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 101, 50

Conread position: 93-285
Cow position: chr20:9537106-9537302 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 40, 121

Conread position: 94-248
Cow position: chr20:17765358-17765198 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 47, 96

Conread position: 94-272
Cow position: chr20:6248633-6248444 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 94-275
Cow position: chr20:3599424-3599238 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 42, 102

Conread position: 94-275
Cow position: chr20:34097987-34097793 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 94-285
Cow position: chr20:20967289-20967491 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 39, 0

Conread position: 95-235
Cow position: chr20:16715367-16715512 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 95-261
Cow position: chr20:20056513-20056340 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 37, 62

Conread position: 95-285
Cow position: chr20:22959372-22959178 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 38, 66

Conread position: 95-288
Cow position: chr20:14100462-14100262 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 44, 104

Conread position: 98-271
Cow position: chr20:13652392-13652211 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 98-275
Cow position: chr20:21372281-21372468 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 98-288
Cow position: chr20:23870846-23870646 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 36, 81

Conread position: 99-282
Cow position: chr20:31323765-31323955 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 17

Conread position: 100-261
Cow position: chr20:14620333-14620155 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 100-287
Cow position: chr20:25953243-25953436 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 159

Conread position: 102-261
Cow position: chr20:34083698-34083860 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 62

Conread position: 102-272
Cow position: chr20:12126326-12126147 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 127-283
Cow position: chr20:10818233-10818071 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 133-281
Cow position: chr20:1139753-1139602 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 134-288
Cow position: chr20:5703485-5703645 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 138-279
Cow position: chr20:31799184-31799039 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 140-271
Cow position: chr20:20934711-20934576 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 0

Show alignments to all cow chromosomes.