Cow genome map

Conread name: Thy1-THY010009E11

Conread position: 60-275
Cow position: chr23:39780650-39780874 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 30, 16

Conread position: 76-285
Cow position: chr23:22298124-22297909 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 58, 32

Conread position: 79-288
Cow position: chr23:5723459-5723667 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 54, 113

Conread position: 82-230
Cow position: chr23:1921308-1921152 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 82-245
Cow position: chr23:15710155-15709982 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 110, 58

Conread position: 82-257
Cow position: chr23:3262578-3262396 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 82-260
Cow position: chr23:36309338-36309525 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 88

Conread position: 82-265
Cow position: chr23:4726705-4726901 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 51, 116

Conread position: 82-270
Cow position: chr23:4327772-4327586 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 113, 56

Conread position: 82-271
Cow position: chr23:13520368-13520567 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 82-274
Cow position: chr23:18296726-18296925 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 47, 86

Conread position: 82-274
Cow position: chr23:36172439-36172642 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 82-275
Cow position: chr23:13945953-13946157 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 82-279
Cow position: chr23:13599262-13599464 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 51, 107

Conread position: 82-283
Cow position: chr23:21446037-21446244 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 59, 119

Conread position: 85-288
Cow position: chr23:35247286-35247499 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 168
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 44, 199

Conread position: 89-268
Cow position: chr23:33153265-33153077 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 89-285
Cow position: chr23:24685176-24685373 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 140
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 106, 36

Conread position: 90-245
Cow position: chr23:19371145-19370985 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 129
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 39, 0

Conread position: 90-261
Cow position: chr23:25378580-25378759 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 142
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 123, 106

Conread position: 91-260
Cow position: chr23:4795099-4795274 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 122

Conread position: 91-261
Cow position: chr23:27544755-27544933 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 91-270
Cow position: chr23:6223909-6224088 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 116, 104

Conread position: 91-270
Cow position: chr23:25864767-25864583 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 82, 50

Conread position: 91-270
Cow position: chr23:30950883-30951070 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 91-271
Cow position: chr23:187104-187294 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 91-271
Cow position: chr23:6592773-6592593 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 106

Conread position: 91-271
Cow position: chr23:11129157-11129348 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 42, 173

Conread position: 91-271
Cow position: chr23:19774700-19774884 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 104, 137

Conread position: 91-271
Cow position: chr23:29069516-29069325 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 91-271
Cow position: chr23:41348701-41348508 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 91-272
Cow position: chr23:1767756-1767947 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 91-272
Cow position: chr23:26794986-26794801 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 43, 127

Conread position: 91-272
Cow position: chr23:38845532-38845716 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 51, 64

Conread position: 91-274
Cow position: chr23:3244989-3244800 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 42, 130

Conread position: 91-274
Cow position: chr23:40648805-40648613 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 42, 21

Conread position: 91-275
Cow position: chr23:1742283-1742473 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 46, 124

Conread position: 91-275
Cow position: chr23:6995056-6994863 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 91-275
Cow position: chr23:16700112-16699922 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 152
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 51, 0

Conread position: 91-275
Cow position: chr23:16780623-16780442 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 121, 49

Conread position: 91-275
Cow position: chr23:39083376-39083570 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 100

Conread position: 91-276
Cow position: chr23:33622226-33622029 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 91-281
Cow position: chr23:1398108-1397913 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 48, 6

Conread position: 91-283
Cow position: chr23:9734341-9734536 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 52, 108

Conread position: 91-285
Cow position: chr23:5437071-5436874 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 40, 50

Conread position: 91-285
Cow position: chr23:5881592-5881388 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 91-288
Cow position: chr23:306445-306655 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 91-288
Cow position: chr23:307378-307588 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 91-288
Cow position: chr23:26949126-26949329 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 91-288
Cow position: chr23:29345834-29345637 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 46, 97

Conread position: 91-288
Cow position: chr23:34356570-34356773 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 44, 140

Conread position: 92-239
Cow position: chr23:19173426-19173280 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 121
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 121, 47

Conread position: 92-253
Cow position: chr23:18322488-18322328 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 121, 41

Conread position: 92-261
Cow position: chr23:24984240-24984064 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 92-270
Cow position: chr23:12091431-12091242 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 92-270
Cow position: chr23:23409667-23409847 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 103, 48

Conread position: 92-271
Cow position: chr23:1923909-1923722 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 66

Conread position: 92-271
Cow position: chr23:39753045-39753229 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 42, 7

Conread position: 92-275
Cow position: chr23:4966747-4966938 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 41, 124

Conread position: 92-275
Cow position: chr23:38455254-38455058 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 156
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 41, 0

Conread position: 92-276
Cow position: chr23:33711689-33711880 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 41, 166

Conread position: 92-279
Cow position: chr23:15743019-15743213 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 23

Conread position: 93-270
Cow position: chr23:18402360-18402175 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 34, 0

Conread position: 93-271
Cow position: chr23:40844581-40844765 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 39, 163

Conread position: 93-272
Cow position: chr23:22804654-22804841 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 46, 162

Conread position: 93-274
Cow position: chr23:38208654-38208844 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 93-285
Cow position: chr23:1655823-1656024 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 93-285
Cow position: chr23:21309484-21309283 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 19, 5

Conread position: 94-270
Cow position: chr23:15287208-15287025 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 44, 155

Conread position: 94-270
Cow position: chr23:21336557-21336369 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 94-272
Cow position: chr23:28945135-28944952 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 94-285
Cow position: chr23:1885242-1885043 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 40, 0

Conread position: 94-285
Cow position: chr23:16582979-16582780 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 95-270
Cow position: chr23:14164470-14164280 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 96-253
Cow position: chr23:4562817-4562983 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 96-279
Cow position: chr23:1254619-1254811 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 97-275
Cow position: chr23:4968588-4968410 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 40, 144

Conread position: 98-279
Cow position: chr23:6244656-6244473 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 56

Conread position: 98-285
Cow position: chr23:5436711-5436513 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 35, 164

Conread position: 101-284
Cow position: chr23:20388713-20388525 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 11

Conread position: 102-285
Cow position: chr23:18416109-18415926 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 138

Conread position: 102-288
Cow position: chr23:19765293-19765486 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 34, 53

Conread position: 103-271
Cow position: chr23:35503723-35503888 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 35, 10

Conread position: 103-275
Cow position: chr23:4104343-4104515 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 28, 13

Conread position: 104-276
Cow position: chr23:1701110-1701292 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 106-271
Cow position: chr23:35929898-35930066 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 90, 34

Conread position: 109-275
Cow position: chr23:3244522-3244349 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 124-275
Cow position: chr23:26283690-26283842 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 71, 16

Conread position: 124-276
Cow position: chr23:4972731-4972886 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 127-271
Cow position: chr23:23904361-23904212 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 135-288
Cow position: chr23:57189-57029 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 8, 0

Conread position: 139-288
Cow position: chr23:3835615-3835463 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 139-300
Cow position: chr23:14569521-14569354 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 142-288
Cow position: chr23:37118727-37118581 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 75, 54

Conread position: 143-285
Cow position: chr23:27790001-27790145 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 133

Show alignments to all cow chromosomes.