Cow genome map

Conread name: Thy1-THY010009E11

Conread position: 60-226
Cow position: chr28:5826849-5827023 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 70-271
Cow position: chr28:3078773-3078564 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 61, 5

Conread position: 81-272
Cow position: chr28:25677427-25677222 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 52, 0

Conread position: 82-275
Cow position: chr28:4881316-4881118 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 82-275
Cow position: chr28:5144597-5144399 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 156
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 57, 20

Conread position: 82-275
Cow position: chr28:24706824-24707019 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 115, 49

Conread position: 82-275
Cow position: chr28:32174550-32174751 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 56, 76

Conread position: 82-281
Cow position: chr28:23410404-23410195 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 57, 0

Conread position: 82-281
Cow position: chr28:30746807-30746602 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 53, 34

Conread position: 82-285
Cow position: chr28:8147941-8147732 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 55, 0

Conread position: 82-285
Cow position: chr28:10053412-10053192 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 82-285
Cow position: chr28:18760127-18759923 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 48, 138

Conread position: 82-287
Cow position: chr28:27161407-27161193 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 52, 0

Conread position: 82-288
Cow position: chr28:20313196-20313412 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 31, 21

Conread position: 87-257
Cow position: chr28:17012366-17012187 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 48, 0

Conread position: 87-275
Cow position: chr28:13090601-13090404 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 86

Conread position: 89-270
Cow position: chr28:26719278-26719460 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 106, 41

Conread position: 89-285
Cow position: chr28:11866738-11866533 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 20

Conread position: 89-288
Cow position: chr28:26982809-26982603 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 91-237
Cow position: chr28:3161024-3160869 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 41, 0

Conread position: 91-245
Cow position: chr28:26103638-26103794 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 79, 103

Conread position: 91-258
Cow position: chr28:25728129-25728299 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 94

Conread position: 91-258
Cow position: chr28:32365772-32365949 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 91-265
Cow position: chr28:21380808-21380992 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 161

Conread position: 91-270
Cow position: chr28:18354394-18354210 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 121, 95

Conread position: 91-271
Cow position: chr28:1538101-1538277 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 48, 11

Conread position: 91-271
Cow position: chr28:7009047-7008860 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 42, 0

Conread position: 91-271
Cow position: chr28:7388837-7388654 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 42, 99

Conread position: 91-272
Cow position: chr28:2752565-2752375 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 44, 0

Conread position: 91-272
Cow position: chr28:7372192-7372003 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 91-274
Cow position: chr28:4307974-4307776 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 42, 171

Conread position: 91-275
Cow position: chr28:3011343-3011148 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 91-275
Cow position: chr28:8408664-8408846 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 131

Conread position: 91-275
Cow position: chr28:9099864-9100048 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 40, 121

Conread position: 91-275
Cow position: chr28:11307578-11307395 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 105, 34

Conread position: 91-275
Cow position: chr28:26922437-26922246 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 91-277
Cow position: chr28:5166696-5166891 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 91-277
Cow position: chr28:7350587-7350778 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 91-283
Cow position: chr28:4016462-4016661 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 137
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 91-283
Cow position: chr28:25249283-25249484 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 26, 0

Conread position: 91-285
Cow position: chr28:7698050-7697850 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 42, 84

Conread position: 91-285
Cow position: chr28:10606698-10606502 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 42, 79

Conread position: 91-285
Cow position: chr28:21363675-21363872 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 46, 95

Conread position: 91-288
Cow position: chr28:10297790-10297986 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 122, 79

Conread position: 91-292
Cow position: chr28:21355153-21355371 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 43, 71

Conread position: 92-259
Cow position: chr28:5931283-5931458 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 23, 102

Conread position: 92-271
Cow position: chr28:16085255-16085443 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 41, 12

Conread position: 92-271
Cow position: chr28:19222219-19222033 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 40, 11

Conread position: 92-271
Cow position: chr28:23007803-23007612 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 92-272
Cow position: chr28:14933897-14934077 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 109, 46

Conread position: 92-285
Cow position: chr28:2898929-2899121 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 153
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 103, 38

Conread position: 92-285
Cow position: chr28:4282559-4282360 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 182

Conread position: 92-285
Cow position: chr28:34230162-34230360 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 41, 22

Conread position: 92-288
Cow position: chr28:12672532-12672329 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 92-288
Cow position: chr28:17398295-17398099 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 22

Conread position: 92-288
Cow position: chr28:17414536-17414340 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 22

Conread position: 92-288
Cow position: chr28:27218255-27218457 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 92-311
Cow position: chr28:22321357-22321580 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 71

Conread position: 93-246
Cow position: chr28:25283133-25283287 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 104

Conread position: 93-270
Cow position: chr28:21598322-21598133 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 93-272
Cow position: chr28:23676072-23676258 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 45, 9

Conread position: 93-291
Cow position: chr28:20759772-20759564 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 11, 142

Conread position: 94-246
Cow position: chr28:3449234-3449396 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 94-272
Cow position: chr28:25399805-25399987 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 39, 65

Conread position: 94-275
Cow position: chr28:26743557-26743748 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 94-282
Cow position: chr28:29434500-29434299 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 94-285
Cow position: chr28:11346551-11346354 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 94-294
Cow position: chr28:30865351-30865559 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 42, 5

Conread position: 95-276
Cow position: chr28:4013020-4013207 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 96-245
Cow position: chr28:4823541-4823696 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 96-275
Cow position: chr28:9426417-9426228 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 96-285
Cow position: chr28:4643833-4643638 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 97-271
Cow position: chr28:4765611-4765794 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 145
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 99-285
Cow position: chr28:2819720-2819907 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 97, 33

Conread position: 100-271
Cow position: chr28:20397432-20397252 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 144
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 37, 0

Conread position: 102-272
Cow position: chr28:751171-751344 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 37, 130

Conread position: 103-285
Cow position: chr28:28765963-28765771 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 103-288
Cow position: chr28:11559694-11559497 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 105-275
Cow position: chr28:8149682-8149510 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 97, 19

Conread position: 112-272
Cow position: chr28:6059520-6059351 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 21, 0

Conread position: 124-279
Cow position: chr28:19216790-19216947 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 91, 17

Conread position: 127-293
Cow position: chr28:10615976-10615806 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 128-275
Cow position: chr28:21008697-21008545 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 11, 144

Conread position: 133-283
Cow position: chr28:18770059-18770210 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 9, 75

Conread position: 134-288
Cow position: chr28:3143898-3143743 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 79, 62

Conread position: 142-288
Cow position: chr28:13048298-13048147 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 54, 34

Show alignments to all cow chromosomes.