Cow genome map

Conread name: Thy1-THY010009E11

Conread position: 63-275
Cow position: chr29:847747-847527 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 13

Conread position: 69-275
Cow position: chr29:13373200-13373416 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 70-285
Cow position: chr29:28166312-28166097 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 79, 5

Conread position: 76-285
Cow position: chr29:12784048-12783838 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 137, 105

Conread position: 78-224
Cow position: chr29:13486859-13487015 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 79-281
Cow position: chr29:22519220-22519006 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 163
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 9, 173

Conread position: 80-275
Cow position: chr29:19250260-19250448 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 33

Conread position: 82-269
Cow position: chr29:38580891-38581088 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 82-271
Cow position: chr29:1022209-1022406 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 50, 188

Conread position: 82-271
Cow position: chr29:8862564-8862370 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 54, 103

Conread position: 82-271
Cow position: chr29:9912086-9912286 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 177

Conread position: 82-271
Cow position: chr29:31813862-31814050 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 113, 81

Conread position: 82-271
Cow position: chr29:44378501-44378308 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 135
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 51, 123

Conread position: 82-272
Cow position: chr29:19428573-19428772 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 54, 169

Conread position: 82-272
Cow position: chr29:40994976-40994779 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 82-275
Cow position: chr29:13028351-13028555 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 121

Conread position: 82-276
Cow position: chr29:41530761-41530965 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 46, 181

Conread position: 82-283
Cow position: chr29:22175601-22175804 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 50, 69

Conread position: 82-288
Cow position: chr29:2263083-2262867 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 40, 124

Conread position: 83-285
Cow position: chr29:20167338-20167550 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 50, 9

Conread position: 84-285
Cow position: chr29:17222330-17222540 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 8

Conread position: 86-272
Cow position: chr29:8005005-8004815 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 49, 86

Conread position: 86-285
Cow position: chr29:21645242-21645434 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 56, 43

Conread position: 89-271
Cow position: chr29:87095-86901 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 172

Conread position: 90-272
Cow position: chr29:34297649-34297456 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 168

Conread position: 91-194
Cow position: chr29:12004838-12004732 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 91-248
Cow position: chr29:41365035-41365197 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 91-257
Cow position: chr29:4520258-4520433 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 104

Conread position: 91-259
Cow position: chr29:19821210-19821382 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 91-259
Cow position: chr29:32290531-32290708 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 91-260
Cow position: chr29:35292011-35292193 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 91-270
Cow position: chr29:4085242-4085419 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 122, 41

Conread position: 91-271
Cow position: chr29:6015045-6015237 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 91-271
Cow position: chr29:28993783-28993974 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 91-271
Cow position: chr29:29057102-29057286 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 41, 99

Conread position: 91-271
Cow position: chr29:31926366-31926189 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 47, 126

Conread position: 91-272
Cow position: chr29:22778254-22778061 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 91-275
Cow position: chr29:707028-706842 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 101

Conread position: 91-275
Cow position: chr29:6286235-6286046 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 146
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 44, 0

Conread position: 91-275
Cow position: chr29:6844705-6844517 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 44, 22

Conread position: 91-275
Cow position: chr29:15947094-15947282 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 41, 20

Conread position: 91-275
Cow position: chr29:21443418-21443223 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 91-275
Cow position: chr29:22936193-22936386 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 42, 96

Conread position: 91-277
Cow position: chr29:29769428-29769235 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 184

Conread position: 91-281
Cow position: chr29:43183385-43183190 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 11

Conread position: 91-283
Cow position: chr29:12025547-12025353 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 153
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 41, 102

Conread position: 91-285
Cow position: chr29:11915743-11915945 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 42, 115

Conread position: 91-285
Cow position: chr29:30440854-30441062 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 42, 159

Conread position: 91-288
Cow position: chr29:13867289-13867081 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 92-253
Cow position: chr29:26319099-26319259 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 121, 40

Conread position: 92-264
Cow position: chr29:44008857-44008681 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 66

Conread position: 92-271
Cow position: chr29:8669289-8669465 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 99

Conread position: 92-271
Cow position: chr29:11398000-11397816 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 60

Conread position: 92-271
Cow position: chr29:39567611-39567792 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 41, 97

Conread position: 92-274
Cow position: chr29:11053935-11053746 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 92-275
Cow position: chr29:17297058-17297251 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 41, 168

Conread position: 92-276
Cow position: chr29:40096887-40097078 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 117

Conread position: 92-285
Cow position: chr29:24292794-24292992 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 43, 182

Conread position: 92-285
Cow position: chr29:34745737-34745534 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 83

Conread position: 92-288
Cow position: chr29:13372589-13372791 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 49, 165

Conread position: 92-288
Cow position: chr29:13639446-13639238 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 42, 23

Conread position: 93-261
Cow position: chr29:12626054-12625875 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 93-270
Cow position: chr29:6293549-6293369 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 45, 50

Conread position: 93-271
Cow position: chr29:32894193-32894374 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 102, 34

Conread position: 93-271
Cow position: chr29:40583718-40583896 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 46, 97

Conread position: 93-275
Cow position: chr29:32926021-32926219 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 93-288
Cow position: chr29:7103480-7103688 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 94-261
Cow position: chr29:11434048-11434220 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 94-271
Cow position: chr29:32799782-32799601 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 40, 76

Conread position: 94-280
Cow position: chr29:28195587-28195401 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 48, 81

Conread position: 94-357
Cow position: chr29:17409261-17409535 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 190
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 218

Conread position: 95-281
Cow position: chr29:10653268-10653453 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 93

Conread position: 95-283
Cow position: chr29:40299087-40298897 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 100, 32

Conread position: 95-288
Cow position: chr29:25333537-25333333 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 118

Conread position: 95-288
Cow position: chr29:27858719-27858915 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 39, 87

Conread position: 96-271
Cow position: chr29:23825596-23825784 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 98-272
Cow position: chr29:7310614-7310785 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 44, 18

Conread position: 98-275
Cow position: chr29:26654110-26653929 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 88, 41

Conread position: 102-285
Cow position: chr29:5046586-5046779 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 105-276
Cow position: chr29:42630058-42630235 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 152

Conread position: 109-271
Cow position: chr29:25088691-25088854 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 107, 65

Conread position: 109-272
Cow position: chr29:43544661-43544491 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 68

Conread position: 125-261
Cow position: chr29:8686291-8686431 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 126-261
Cow position: chr29:17154742-17154879 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 89, 15

Conread position: 133-271
Cow position: chr29:31981800-31981942 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 133-357
Cow position: chr29:43252702-43252480 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 62, 138

Conread position: 134-275
Cow position: chr29:5788999-5789144 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 134-276
Cow position: chr29:5520515-5520369 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 135-272
Cow position: chr29:31934350-31934491 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 137-271
Cow position: chr29:4423466-4423328 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 0

Show alignments to all cow chromosomes.