Cow genome map

Conread name: Thy1-THY010009G06

Conread position: 1-162
Cow position: chr11:67388366-67388208 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 125, 37

Conread position: 1-227
Cow position: chr11:38638166-38638397 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 176
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 74, 139

Conread position: 1-266
Cow position: chr11:84135019-84135291 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 184
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 62, 173

Conread position: 1-285
Cow position: chr11:3681683-3681972 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 197
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 61, 126

Conread position: 1-288
Cow position: chr11:9870662-9870374 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 198
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 62, 175

Conread position: 1-290
Cow position: chr11:4675471-4675750 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 196
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 62, 103

Conread position: 1-290
Cow position: chr11:19490703-19490403 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 201
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 74, 152

Conread position: 1-290
Cow position: chr11:58804660-58804955 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 153

Conread position: 1-291
Cow position: chr11:31893102-31892806 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 195
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 70, 149

Conread position: 1-294
Cow position: chr11:16229490-16229786 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 211
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 61, 153

Conread position: 1-294
Cow position: chr11:21728859-21729159 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 109

Conread position: 1-294
Cow position: chr11:49556168-49556462 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 203
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 77

Conread position: 1-294
Cow position: chr11:76566627-76566325 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 211
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 74, 152

Conread position: 1-294
Cow position: chr11:76960609-76960323 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 201
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 120, 62

Conread position: 1-302
Cow position: chr11:28381829-28381523 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 209
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 60, 148

Conread position: 2-151
Cow position: chr11:21820240-21820397 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 2-155
Cow position: chr11:14650075-14650237 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 2-179
Cow position: chr11:9079180-9079358 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 58, 145

Conread position: 2-179
Cow position: chr11:64904249-64904062 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 60, 151

Conread position: 2-184
Cow position: chr11:25332577-25332767 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 66, 61

Conread position: 2-189
Cow position: chr11:48658891-48658697 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 150

Conread position: 2-199
Cow position: chr11:9222499-9222700 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 87, 149

Conread position: 2-204
Cow position: chr11:53280239-53280448 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 164
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 51, 120

Conread position: 2-220
Cow position: chr11:38842781-38842561 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 72, 177

Conread position: 2-227
Cow position: chr11:40402612-40402842 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 62, 148

Conread position: 2-227
Cow position: chr11:70602122-70602349 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 149

Conread position: 2-233
Cow position: chr11:8499227-8498989 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 162
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 60, 215

Conread position: 2-244
Cow position: chr11:67746573-67746324 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 151

Conread position: 2-245
Cow position: chr11:32108927-32108685 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 173
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 61, 117

Conread position: 2-245
Cow position: chr11:47757827-47758078 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 180
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 68, 61

Conread position: 2-249
Cow position: chr11:14469659-14469419 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 186
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 124, 85

Conread position: 2-258
Cow position: chr11:17037376-17037622 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 192
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 93, 51

Conread position: 2-272
Cow position: chr11:56228090-56227812 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 124

Conread position: 2-279
Cow position: chr11:63167362-63167639 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 148

Conread position: 2-282
Cow position: chr11:21853090-21853378 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 212
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 61, 150

Conread position: 2-288
Cow position: chr11:25336299-25336006 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 216
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 61, 17

Conread position: 2-288
Cow position: chr11:30057356-30057074 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 60

Conread position: 2-288
Cow position: chr11:47972691-47972985 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 205
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 60, 152

Conread position: 2-290
Cow position: chr11:4053191-4053470 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 201
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 60, 115

Conread position: 2-290
Cow position: chr11:4206333-4206045 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 118

Conread position: 2-290
Cow position: chr11:83285042-83284758 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 61, 135

Conread position: 2-293
Cow position: chr11:1667782-1667488 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 215
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 66, 61

Conread position: 2-293
Cow position: chr11:10094030-10093738 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 210
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 61, 108

Conread position: 2-293
Cow position: chr11:86579086-86578786 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 211
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 73, 246

Conread position: 2-294
Cow position: chr11:2285874-2285574 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 213
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 60, 152

Conread position: 2-294
Cow position: chr11:15995655-15995347 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 225
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 66, 61

Conread position: 2-294
Cow position: chr11:23494906-23494612 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 209
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 79, 173

Conread position: 2-294
Cow position: chr11:26067949-26068258 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 210
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 68, 198

Conread position: 2-294
Cow position: chr11:27938754-27938471 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 209
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 124, 61

Conread position: 2-294
Cow position: chr11:28692812-28693109 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 217
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 73, 162

Conread position: 2-294
Cow position: chr11:33001032-33000741 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 211
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 61, 113

Conread position: 2-294
Cow position: chr11:37279420-37279713 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 214
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 61, 108

Conread position: 2-294
Cow position: chr11:40458337-40458036 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 165

Conread position: 2-294
Cow position: chr11:44233582-44233295 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 103

Conread position: 2-294
Cow position: chr11:56652081-56652378 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 220
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 60, 151

Conread position: 2-294
Cow position: chr11:59871971-59871677 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 145

Conread position: 2-294
Cow position: chr11:67848811-67849119 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 212
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 61, 150

Conread position: 2-294
Cow position: chr11:73513212-73513511 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 151

Conread position: 2-294
Cow position: chr11:74928957-74928664 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 216
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 73, 116

Conread position: 2-294
Cow position: chr11:75354368-75354064 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 151

Conread position: 2-294
Cow position: chr11:77746045-77746345 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 220
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 61, 151

Conread position: 2-294
Cow position: chr11:80789229-80789530 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 151

Conread position: 2-294
Cow position: chr11:84774326-84774026 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 152

Conread position: 2-298
Cow position: chr11:44106843-44106541 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 222
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 60, 162

Conread position: 2-300
Cow position: chr11:49411398-49411699 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 207
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 69, 160

Conread position: 2-303
Cow position: chr11:49935587-49935895 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 152

Conread position: 3-224
Cow position: chr11:74389359-74389130 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 156
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 151

Conread position: 3-227
Cow position: chr11:2801099-2801331 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 158
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 59, 151

Conread position: 3-239
Cow position: chr11:23904442-23904198 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 59, 151

Conread position: 3-239
Cow position: chr11:43917594-43917350 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 169
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 58, 149

Conread position: 3-239
Cow position: chr11:61131793-61132037 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 78, 151

Conread position: 3-242
Cow position: chr11:75256350-75256103 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 169
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 59, 151

Conread position: 3-252
Cow position: chr11:7377180-7376924 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 185
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 29, 35

Conread position: 3-252
Cow position: chr11:33601479-33601737 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 175
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 59, 150

Conread position: 3-258
Cow position: chr11:3230480-3230221 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 149

Conread position: 3-264
Cow position: chr11:4734443-4734174 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 181
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 59, 151

Conread position: 3-268
Cow position: chr11:16118788-16119055 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 57, 145

Conread position: 3-282
Cow position: chr11:44893715-44894002 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 198
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 59, 182

Conread position: 3-283
Cow position: chr11:48411688-48411394 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 60, 151

Conread position: 3-287
Cow position: chr11:85390702-85390982 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 198
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 59, 155

Conread position: 3-288
Cow position: chr11:15495548-15495255 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 205
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 59, 151

Conread position: 3-290
Cow position: chr11:4024195-4024484 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 194
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 128

Conread position: 3-290
Cow position: chr11:4266995-4267290 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 202
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 60, 149

Conread position: 3-290
Cow position: chr11:14259801-14260092 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 209
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 69, 60

Conread position: 3-290
Cow position: chr11:23883507-23883212 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 202
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 60, 182

Conread position: 3-290
Cow position: chr11:31836344-31836055 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 60, 149

Conread position: 3-290
Cow position: chr11:41167534-41167829 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 201
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 60, 149

Conread position: 3-291
Cow position: chr11:7329098-7328804 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 212
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 60, 92

Conread position: 3-291
Cow position: chr11:11592140-11591841 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 212
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 72, 142

Conread position: 3-293
Cow position: chr11:30200539-30200831 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 205
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 59, 131

Conread position: 3-293
Cow position: chr11:41093702-41094000 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 60, 149

Conread position: 3-293
Cow position: chr11:67599731-67599441 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 148

Conread position: 3-293
Cow position: chr11:75711093-75711391 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 208
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr11:3238462-3238162 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 211
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 60, 152

Conread position: 3-294
Cow position: chr11:5273414-5273713 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 60, 151

Conread position: 3-294
Cow position: chr11:5482286-5482585 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 204
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 60, 151

Conread position: 3-294
Cow position: chr11:7229520-7229221 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 208
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 60, 151

Conread position: 3-294
Cow position: chr11:7719355-7719654 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 211
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 60, 151

Conread position: 3-294
Cow position: chr11:8366720-8366421 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 59, 182

Conread position: 3-294
Cow position: chr11:8443831-8444126 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 209
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 60, 148

Conread position: 3-294
Cow position: chr11:9708308-9708009 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 211
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 59, 150

Conread position: 3-294
Cow position: chr11:10698586-10698885 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr11:10871665-10871964 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 215
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 60, 198

Conread position: 3-294
Cow position: chr11:10958989-10958691 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr11:12178248-12177949 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 212
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 78, 151

Conread position: 3-294
Cow position: chr11:12316910-12317209 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 211
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 59, 149

Conread position: 3-294
Cow position: chr11:12353732-12354031 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 207
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 60, 182

Conread position: 3-294
Cow position: chr11:13087507-13087806 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 60, 149

Conread position: 3-294
Cow position: chr11:15047619-15047320 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 78, 151

Conread position: 3-294
Cow position: chr11:17549318-17549019 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 207
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 59, 184

Conread position: 3-294
Cow position: chr11:17854254-17853955 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 212
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr11:17997774-17998072 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 216
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr11:19060914-19061213 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 210
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 59, 170

Conread position: 3-294
Cow position: chr11:19099325-19099624 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 205
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 60, 182

Conread position: 3-294
Cow position: chr11:20285458-20285757 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 78, 151

Conread position: 3-294
Cow position: chr11:24333833-24334132 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr11:24493648-24493947 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr11:26482730-26482433 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 212
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 60, 149

Conread position: 3-294
Cow position: chr11:26592617-26592916 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 60, 151

Conread position: 3-294
Cow position: chr11:27724741-27725040 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr11:28125673-28125376 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 211
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 60, 149

Conread position: 3-294
Cow position: chr11:28631693-28631394 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 212
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr11:30255598-30255294 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 211
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 60, 152

Conread position: 3-294
Cow position: chr11:30777123-30776824 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr11:30929542-30929243 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr11:32077623-32077921 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 205
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 60, 149

Conread position: 3-294
Cow position: chr11:32455214-32454915 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 60, 182

Conread position: 3-294
Cow position: chr11:32875783-32876082 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr11:35142172-35142471 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 206
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 58, 151

Conread position: 3-294
Cow position: chr11:35738184-35738481 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 206
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 60, 149

Conread position: 3-294
Cow position: chr11:38505071-38505370 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr11:38574325-38574624 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 60, 151

Conread position: 3-294
Cow position: chr11:38599554-38599853 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 213
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr11:38641109-38640812 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 203
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 60, 148

Conread position: 3-294
Cow position: chr11:38832319-38832616 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 203
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 60, 182

Conread position: 3-294
Cow position: chr11:40772910-40773193 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 206
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 60, 179

Conread position: 3-294
Cow position: chr11:41260768-41261067 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 78, 151

Conread position: 3-294
Cow position: chr11:41314455-41314157 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 59, 143

Conread position: 3-294
Cow position: chr11:44153923-44154217 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 206
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 64, 149

Conread position: 3-294
Cow position: chr11:44255233-44254935 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 206
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 59, 149

Conread position: 3-294
Cow position: chr11:46780910-46781207 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 207
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 60, 148

Conread position: 3-294
Cow position: chr11:50510512-50510811 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr11:52846635-52846335 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 210
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr11:53428863-53429161 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 60, 45

Conread position: 3-294
Cow position: chr11:54302697-54302398 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 78, 151

Conread position: 3-294
Cow position: chr11:58139854-58139566 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 209
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 60, 154

Conread position: 3-294
Cow position: chr11:63390322-63390618 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 212
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr11:63860484-63860782 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 216
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 59, 107

Conread position: 3-294
Cow position: chr11:67453813-67453516 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 212
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 60, 149

Conread position: 3-294
Cow position: chr11:70030579-70030282 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 204
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 59, 149

Conread position: 3-294
Cow position: chr11:72369214-72368914 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 208
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr11:74990780-74990481 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 60, 149

Conread position: 3-295
Cow position: chr11:26550636-26550337 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 215
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 69, 60

Conread position: 3-301
Cow position: chr11:17781871-17782174 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 220
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 57, 106

Conread position: 3-303
Cow position: chr11:80591517-80591215 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 212
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 60, 148

Conread position: 3-328
Cow position: chr11:51034436-51034104 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 234
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 59, 151

Conread position: 3-752
Cow position: chr11:30088036-30087279 (view UCSC Genome Browser custom track)
Alignm length: 759
Alignm identity: 185
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 59, 151

Conread position: 4-170
Cow position: chr11:51477793-51477621 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 59, 146

Conread position: 4-290
Cow position: chr11:67347958-67348250 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 216
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 65, 150

Conread position: 5-294
Cow position: chr11:50950108-50949809 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 222
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 58, 115

Conread position: 6-242
Cow position: chr11:46412792-46412547 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 183
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 62, 57

Conread position: 6-287
Cow position: chr11:8829628-8829901 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 206
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 56, 108

Conread position: 6-293
Cow position: chr11:58399483-58399194 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 142

Conread position: 6-294
Cow position: chr11:22933470-22933762 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 58, 140

Conread position: 8-170
Cow position: chr11:33687317-33687488 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 67, 147

Conread position: 8-239
Cow position: chr11:33687894-33688128 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 67, 146

Conread position: 8-244
Cow position: chr11:12112081-12111838 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 145

Conread position: 8-258
Cow position: chr11:64844226-64843969 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 154
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 53, 143

Conread position: 8-276
Cow position: chr11:61397466-61397742 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 190
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 54, 193

Conread position: 8-278
Cow position: chr11:32762607-32762329 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 192
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 54, 177

Conread position: 8-288
Cow position: chr11:2835419-2835131 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 203
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 53, 147

Conread position: 8-290
Cow position: chr11:259989-260283 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 22

Conread position: 8-290
Cow position: chr11:41599533-41599823 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 8-290
Cow position: chr11:63507664-63507373 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 213
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 60, 8

Conread position: 8-290
Cow position: chr11:75511033-75511326 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 146

Conread position: 8-293
Cow position: chr11:7319173-7318886 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 195
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 47, 121

Conread position: 8-294
Cow position: chr11:8844334-8844038 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 146

Conread position: 8-294
Cow position: chr11:26121765-26122059 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 207
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 55, 146

Conread position: 8-294
Cow position: chr11:27922951-27922654 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 211
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 55, 145

Conread position: 8-294
Cow position: chr11:30700649-30700355 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 202
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 55, 144

Conread position: 8-294
Cow position: chr11:42358346-42358063 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 213
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 67, 49

Conread position: 8-294
Cow position: chr11:48982444-48982151 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 204
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 53, 145

Conread position: 8-295
Cow position: chr11:43510820-43511115 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 200
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 55, 177

Conread position: 9-294
Cow position: chr11:9388491-9388198 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 209
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 54, 143

Conread position: 9-294
Cow position: chr11:59368881-59369174 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 202
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 53, 143

Conread position: 9-294
Cow position: chr11:65282164-65281880 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 206
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 54, 177

Conread position: 10-245
Cow position: chr11:21371928-21372171 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 52, 183

Conread position: 10-252
Cow position: chr11:1626005-1626251 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 193
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 54, 143

Conread position: 10-294
Cow position: chr11:17980141-17980431 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 53, 140

Conread position: 12-289
Cow position: chr11:34297634-34297355 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 192
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 58, 102

Conread position: 12-290
Cow position: chr11:25808599-25808882 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 205
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 51, 142

Conread position: 13-289
Cow position: chr11:7386556-7386283 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 199
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 58, 107

Conread position: 25-282
Cow position: chr11:87154872-87155130 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 188
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 36, 126

Conread position: 551-756
Cow position: chr11:35861779-35861978 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 24, 119

Conread position: 551-770
Cow position: chr11:38574612-38574826 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 153, 61

Conread position: 551-778
Cow position: chr11:66739347-66739568 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 156
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 153, 61

Show alignments to all cow chromosomes.