Cow genome map

Conread name: Thy1-THY010009G06

Conread position: 1-252
Cow position: chr12:19972187-19971936 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 164
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 119, 52

Conread position: 1-293
Cow position: chr12:15760486-15760184 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 204
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 74, 137

Conread position: 1-340
Cow position: chr12:28840255-28839912 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 231
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 62, 155

Conread position: 2-125
Cow position: chr12:22286491-22286621 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 2-166
Cow position: chr12:19862131-19861972 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 124, 56

Conread position: 2-199
Cow position: chr12:10988799-10988597 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 68, 143

Conread position: 2-268
Cow position: chr12:24205974-24205705 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 62, 147

Conread position: 2-285
Cow position: chr12:36568901-36569191 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 211
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 69, 121

Conread position: 2-288
Cow position: chr12:17663393-17663113 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 193
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 124, 73

Conread position: 2-288
Cow position: chr12:21075272-21074986 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 202
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 59, 112

Conread position: 2-290
Cow position: chr12:1093344-1093050 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 61, 156

Conread position: 2-290
Cow position: chr12:8841614-8841907 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 150

Conread position: 2-290
Cow position: chr12:15939434-15939713 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 208
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 61, 113

Conread position: 2-290
Cow position: chr12:47803597-47803320 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 125

Conread position: 2-291
Cow position: chr12:1476218-1476514 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 201
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 60, 151

Conread position: 2-293
Cow position: chr12:21484846-21484557 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 198
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 61, 149

Conread position: 2-293
Cow position: chr12:25313269-25313568 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 61

Conread position: 2-294
Cow position: chr12:11582605-11582314 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 220
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 13, 162

Conread position: 2-294
Cow position: chr12:15821165-15820876 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 217
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 60, 27

Conread position: 2-294
Cow position: chr12:19198478-19198180 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 152

Conread position: 2-294
Cow position: chr12:19871659-19871356 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 216
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 20, 152

Conread position: 2-294
Cow position: chr12:21313987-21314285 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 215
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 61, 112

Conread position: 2-294
Cow position: chr12:21904801-21904511 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 212
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 61, 150

Conread position: 2-294
Cow position: chr12:30687186-30686887 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 216
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 66, 61

Conread position: 2-294
Cow position: chr12:33297074-33296777 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 214
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 61, 150

Conread position: 2-294
Cow position: chr12:43681449-43681149 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 204
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 60, 150

Conread position: 2-294
Cow position: chr12:48416298-48416600 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 225
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 69, 27

Conread position: 2-295
Cow position: chr12:24558020-24557723 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 108

Conread position: 3-221
Cow position: chr12:23475194-23474970 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 60, 139

Conread position: 3-224
Cow position: chr12:14214504-14214275 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 157
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 151

Conread position: 3-245
Cow position: chr12:22480568-22480318 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 173
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 59, 151

Conread position: 3-248
Cow position: chr12:31260966-31261219 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 180
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 61, 160

Conread position: 3-252
Cow position: chr12:22202238-22202495 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 175
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 60, 149

Conread position: 3-276
Cow position: chr12:249877-250156 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 193
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 60, 151

Conread position: 3-288
Cow position: chr12:13042798-13043091 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 207
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 59, 151

Conread position: 3-288
Cow position: chr12:36445829-36445537 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 204
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 72, 150

Conread position: 3-290
Cow position: chr12:27506206-27506501 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 204
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 60, 182

Conread position: 3-290
Cow position: chr12:32656992-32656697 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 201
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr12:61764-62063 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr12:259173-258874 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 213
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr12:1056065-1056363 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr12:3180852-3180559 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 199
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 60, 149

Conread position: 3-294
Cow position: chr12:3716830-3717129 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 209
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 72, 149

Conread position: 3-294
Cow position: chr12:5107501-5107202 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr12:8839697-8839398 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 60, 151

Conread position: 3-294
Cow position: chr12:11101691-11101392 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 207
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 60, 182

Conread position: 3-294
Cow position: chr12:12928467-12928762 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr12:14568381-14568670 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 202
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 59, 114

Conread position: 3-294
Cow position: chr12:16301895-16302194 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr12:18586116-18585817 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 208
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 60, 149

Conread position: 3-294
Cow position: chr12:21432783-21432484 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 212
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 59, 150

Conread position: 3-294
Cow position: chr12:21452534-21452833 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr12:22517411-22517707 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 210
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 59, 137

Conread position: 3-294
Cow position: chr12:23137885-23138184 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 207
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 68, 151

Conread position: 3-294
Cow position: chr12:24029039-24029335 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 205
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 60, 149

Conread position: 3-294
Cow position: chr12:25265890-25266189 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 214
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr12:27958082-27958381 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr12:28012788-28013087 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 78, 151

Conread position: 3-294
Cow position: chr12:31027377-31027675 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 207
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 59, 182

Conread position: 3-294
Cow position: chr12:31829006-31829305 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr12:32147186-32147485 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr12:33925254-33925553 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr12:36213721-36213423 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 206
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 60, 151

Conread position: 3-294
Cow position: chr12:36287572-36287868 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 217
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 59, 154

Conread position: 3-294
Cow position: chr12:41337789-41338088 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 208
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 60, 149

Conread position: 3-294
Cow position: chr12:46111674-46111973 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 60, 182

Conread position: 3-295
Cow position: chr12:2229014-2228714 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 207
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 59, 149

Conread position: 3-316
Cow position: chr12:20459279-20459598 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 218
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 60, 131

Conread position: 4-295
Cow position: chr12:9988245-9988543 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 209
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 30, 19

Conread position: 6-155
Cow position: chr12:10490288-10490132 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 6-290
Cow position: chr12:25096825-25097117 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 201
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 56, 146

Conread position: 6-294
Cow position: chr12:2242550-2242842 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 208
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 52, 142

Conread position: 6-294
Cow position: chr12:17718741-17718445 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 208
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 7, 148

Conread position: 8-290
Cow position: chr12:12177803-12178080 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 210
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 67, 150

Conread position: 8-294
Cow position: chr12:15231469-15231179 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 109

Conread position: 8-294
Cow position: chr12:32339818-32340112 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 206
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 54, 177

Conread position: 8-294
Cow position: chr12:32848997-32848712 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 208
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 60, 55

Conread position: 8-314
Cow position: chr12:7869314-7869006 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 211
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 73, 28

Conread position: 9-264
Cow position: chr12:3094185-3094440 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 146

Conread position: 9-284
Cow position: chr12:12754720-12755002 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 191
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 54, 99

Conread position: 9-287
Cow position: chr12:17981824-17981560 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 9-294
Cow position: chr12:28571813-28571528 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 206
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 53, 140

Conread position: 10-242
Cow position: chr12:8172341-8172106 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 160
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 172

Conread position: 10-276
Cow position: chr12:26869820-26870094 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 193
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 43, 95

Conread position: 10-294
Cow position: chr12:10931521-10931229 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 202
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 53, 142

Conread position: 10-294
Cow position: chr12:35311472-35311767 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 199
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 53, 220

Conread position: 15-294
Cow position: chr12:20847563-20847282 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 196
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 64, 134

Show alignments to all cow chromosomes.