Cow genome map


           Conread name:
           Thy1-THY010009G06
        

               Conread position:
               1-252
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               119, 52
               

               Conread position:
               1-293
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               204
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               74, 137
               

               Conread position:
               1-340
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               62, 155
               

               Conread position:
               2-125
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               2-166
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               124, 56
               

               Conread position:
               2-199
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               68, 143
               

               Conread position:
               2-268
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               62, 147
               

               Conread position:
               2-285
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               211
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               69, 121
               

               Conread position:
               2-288
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               124, 73
               

               Conread position:
               2-288
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               59, 112
               

               Conread position:
               2-290
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               61, 156
               

               Conread position:
               2-290
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 150
               

               Conread position:
               2-290
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               208
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               61, 113
               

               Conread position:
               2-290
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 125
               

               Conread position:
               2-291
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               60, 151
               

               Conread position:
               2-293
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               61, 149
               

               Conread position:
               2-293
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 61
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               220
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               13, 162
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               217
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               60, 27
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 152
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               216
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               20, 152
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               215
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               61, 112
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               61, 150
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               216
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               66, 61
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               214
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               61, 150
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               60, 150
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               225
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               69, 27
               

               Conread position:
               2-295
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 108
               

               Conread position:
               3-221
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               60, 139
               

               Conread position:
               3-224
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-245
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-248
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               61, 160
               

               Conread position:
               3-252
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               60, 149
               

               Conread position:
               3-276
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               60, 151
               

               Conread position:
               3-288
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-288
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               72, 150
               

               Conread position:
               3-290
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               60, 182
               

               Conread position:
               3-290
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               211
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               213
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               211
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               60, 149
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               72, 149
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               209
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               211
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               60, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               60, 182
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               59, 114
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               210
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               60, 149
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               59, 150
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               211
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               59, 137
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               68, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               60, 149
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               214
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               210
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               78, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               59, 182
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               209
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               209
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               211
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               60, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               217
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               59, 154
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               60, 149
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               209
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               60, 182
               

               Conread position:
               3-295
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               59, 149
               

               Conread position:
               3-316
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               60, 131
               

               Conread position:
               4-295
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               30, 19
               

               Conread position:
               6-155
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               6-290
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               56, 146
               

               Conread position:
               6-294
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               208
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               52, 142
               

               Conread position:
               6-294
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               7, 148
               

               Conread position:
               8-290
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               67, 150
               

               Conread position:
               8-294
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 109
               

               Conread position:
               8-294
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               54, 177
               

               Conread position:
               8-294
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               60, 55
               

               Conread position:
               8-314
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               211
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               73, 28
               

               Conread position:
               9-264
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 146
               

               Conread position:
               9-284
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               54, 99
               

               Conread position:
               9-287
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               9-294
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               206
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               53, 140
               

               Conread position:
               10-242
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               52, 172
               

               Conread position:
               10-276
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               43, 95
               

               Conread position:
               10-294
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               53, 142
               

               Conread position:
               10-294
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               199
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               53, 220
               

               Conread position:
               15-294
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               64, 134
               
Show alignments to all cow chromosomes.