Cow genome map


           Conread name:
           Thy1-THY010009G06
        

               Conread position:
               1-282
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               65, 201
               

               Conread position:
               1-289
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               61, 156
               

               Conread position:
               1-289
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               62, 214
               

               Conread position:
               1-290
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               75, 116
               

               Conread position:
               1-290
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               205
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               75, 52
               

               Conread position:
               1-294
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 107
               

               Conread position:
               1-294
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               62, 78
               

               Conread position:
               1-294
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               33, 26
               

               Conread position:
               2-152
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               56, 150
               

               Conread position:
               2-164
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               66, 61
               

               Conread position:
               2-218
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               73, 30
               

               Conread position:
               2-258
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 152
               

               Conread position:
               2-259
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               61, 148
               

               Conread position:
               2-272
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 115
               

               Conread position:
               2-287
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               61, 109
               

               Conread position:
               2-287
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 31
               

               Conread position:
               2-290
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               73, 136
               

               Conread position:
               2-290
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               66, 61
               

               Conread position:
               2-290
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 152
               

               Conread position:
               2-290
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 152
               

               Conread position:
               2-290
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               220
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               62, 50
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               59, 148
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               72, 144
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               74, 150
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 135
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               69, 244
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               60, 130
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               73, 160
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               61, 143
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               208
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               67, 148
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               59, 149
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 153
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 157
               

               Conread position:
               2-298
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               2-306
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               44, 145
               

               Conread position:
               2-312
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 150
               

               Conread position:
               3-227
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 24
               

               Conread position:
               3-238
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               60, 149
               

               Conread position:
               3-249
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-252
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               72, 151
               

               Conread position:
               3-265
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               60, 151
               

               Conread position:
               3-268
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               60, 151
               

               Conread position:
               3-276
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               59, 114
               

               Conread position:
               3-289
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               55, 154
               

               Conread position:
               3-290
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               60, 102
               

               Conread position:
               3-290
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               60, 149
               

               Conread position:
               3-290
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               206
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               60, 102
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               209
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               209
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               60, 144
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 60
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               209
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               58, 142
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               210
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               60, 137
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               60, 149
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               58, 149
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               209
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               60, 149
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               60, 150
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               59, 149
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               59, 147
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               60, 149
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               211
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               60, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               60, 149
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               60, 149
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               59, 111
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               209
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               68, 182
               

               Conread position:
               3-295
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-296
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               60, 66
               

               Conread position:
               3-306
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               224
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               65, 60
               

               Conread position:
               6-288
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               57, 145
               

               Conread position:
               6-296
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               6, 19
               

               Conread position:
               8-178
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               55, 16
               

               Conread position:
               8-239
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               62, 55
               

               Conread position:
               8-257
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               67, 107
               

               Conread position:
               8-283
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               8-290
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               55, 144
               

               Conread position:
               8-290
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               69, 150
               

               Conread position:
               8-290
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 146
               

               Conread position:
               8-294
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               210
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               54, 174
               

               Conread position:
               8-294
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               54, 143
               

               Conread position:
               8-294
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               9-290
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               61, 148
               

               Conread position:
               9-293
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               212
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               54, 144
               

               Conread position:
               9-294
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               209
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               53, 176
               

               Conread position:
               11-290
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               202
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               51, 138
               

               Conread position:
               15-293
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               48, 131
               

               Conread position:
               19-289
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               207
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               56, 107
               

               Conread position:
               21-290
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               54, 94
               

               Conread position:
               551-770
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               153, 60
               
Show alignments to all cow chromosomes.