Cow genome map

Conread name: Thy1-THY010009G06

Conread position: 1-222
Cow position: chr18:39494332-39494104 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 142

Conread position: 1-290
Cow position: chr18:15172393-15172105 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 150

Conread position: 1-290
Cow position: chr18:28084593-28084296 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 203
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 67, 62

Conread position: 1-293
Cow position: chr18:21797639-21797338 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 204
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 74, 154

Conread position: 1-294
Cow position: chr18:1145005-1145297 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 208
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 62, 151

Conread position: 1-294
Cow position: chr18:5570072-5569786 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 219
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 47, 7

Conread position: 1-294
Cow position: chr18:17670425-17670717 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 209
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 67, 62

Conread position: 1-294
Cow position: chr18:30232019-30232313 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 203
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 75, 62

Conread position: 1-294
Cow position: chr18:43129629-43129335 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 201
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 70, 105

Conread position: 2-139
Cow position: chr18:21199558-21199705 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 2-155
Cow position: chr18:32122138-32122299 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 61, 144

Conread position: 2-182
Cow position: chr18:24219147-24219335 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 66, 61

Conread position: 2-199
Cow position: chr18:36223979-36223783 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 73, 144

Conread position: 2-208
Cow position: chr18:29240864-29240652 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 61, 159

Conread position: 2-220
Cow position: chr18:46869693-46869475 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 61, 147

Conread position: 2-230
Cow position: chr18:51272590-51272822 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 153

Conread position: 2-245
Cow position: chr18:37692740-37692993 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 187
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 73, 153

Conread position: 2-258
Cow position: chr18:10890293-10890040 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 188
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 59, 114

Conread position: 2-265
Cow position: chr18:16025112-16025385 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 151

Conread position: 2-287
Cow position: chr18:44261610-44261320 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 98

Conread position: 2-288
Cow position: chr18:33851074-33850780 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 209
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 66, 61

Conread position: 2-290
Cow position: chr18:13508523-13508812 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 145

Conread position: 2-290
Cow position: chr18:15858707-15858414 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 197
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 8, 139

Conread position: 2-290
Cow position: chr18:16471650-16471929 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 218
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 69, 110

Conread position: 2-293
Cow position: chr18:2853243-2853544 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 151

Conread position: 2-293
Cow position: chr18:12269697-12269401 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 22

Conread position: 2-293
Cow position: chr18:16135121-16135418 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 204
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 73, 117

Conread position: 2-293
Cow position: chr18:36648939-36648651 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 213
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 58, 128

Conread position: 2-294
Cow position: chr18:23659350-23659649 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 144

Conread position: 2-294
Cow position: chr18:25972521-25972815 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 212
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 66, 55

Conread position: 2-294
Cow position: chr18:29797540-29797841 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 152

Conread position: 2-294
Cow position: chr18:33522763-33522472 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 215
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 61, 148

Conread position: 2-294
Cow position: chr18:33607772-33607480 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 207
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 60, 107

Conread position: 2-294
Cow position: chr18:35057570-35057271 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 219
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 73, 161

Conread position: 2-294
Cow position: chr18:36770989-36771287 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 105

Conread position: 2-294
Cow position: chr18:55554796-55554496 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 211
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 60, 152

Conread position: 2-304
Cow position: chr18:29946996-29946691 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 214
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 117

Conread position: 2-306
Cow position: chr18:10113553-10113249 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 218
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 61, 112

Conread position: 2-312
Cow position: chr18:1022477-1022794 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 223
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 61, 180

Conread position: 3-189
Cow position: chr18:45905330-45905523 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 152
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 56, 119

Conread position: 3-227
Cow position: chr18:6866771-6866539 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 158
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 59, 151

Conread position: 3-288
Cow position: chr18:27990301-27990008 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 199
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 60, 149

Conread position: 3-290
Cow position: chr18:11870031-11869736 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 59, 151

Conread position: 3-293
Cow position: chr18:5536517-5536218 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 202
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 60, 150

Conread position: 3-293
Cow position: chr18:6733421-6733717 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 206
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 60, 149

Conread position: 3-293
Cow position: chr18:37733233-37732936 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 207
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 58, 151

Conread position: 3-293
Cow position: chr18:40484543-40484246 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 205
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 60, 118

Conread position: 3-294
Cow position: chr18:6103860-6104158 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 132

Conread position: 3-294
Cow position: chr18:13270454-13270155 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 212
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 60, 151

Conread position: 3-294
Cow position: chr18:14419521-14419222 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 202
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 60, 149

Conread position: 3-294
Cow position: chr18:16173069-16173368 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 209
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 60, 148

Conread position: 3-294
Cow position: chr18:16857329-16857033 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 205
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 59, 182

Conread position: 3-294
Cow position: chr18:18215469-18215768 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr18:21304046-21303746 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 151

Conread position: 3-294
Cow position: chr18:23688716-23688417 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 213
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr18:23701259-23701553 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 205
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 60, 148

Conread position: 3-294
Cow position: chr18:24037302-24037601 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 60, 151

Conread position: 3-294
Cow position: chr18:24619967-24619674 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 208
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 59, 114

Conread position: 3-294
Cow position: chr18:26242915-26243213 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 208
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 60, 150

Conread position: 3-294
Cow position: chr18:29079281-29078982 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr18:29863060-29863359 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 203
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 60, 182

Conread position: 3-294
Cow position: chr18:30607240-30606941 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 213
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr18:30844362-30844667 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 212
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 60, 143

Conread position: 3-294
Cow position: chr18:32164387-32164686 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr18:36776820-36776521 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 209
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 61, 149

Conread position: 3-294
Cow position: chr18:38157998-38158297 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 209
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 60, 149

Conread position: 3-294
Cow position: chr18:41837546-41837845 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 211
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 60, 149

Conread position: 3-294
Cow position: chr18:51485131-51484835 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 205
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 60, 148

Conread position: 3-294
Cow position: chr18:51602121-51602420 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr18:51690341-51690042 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr18:52656338-52656052 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 205
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 149

Conread position: 3-302
Cow position: chr18:54047423-54047118 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 212
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 59, 151

Conread position: 3-320
Cow position: chr18:19461824-19461497 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 227
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 59, 151

Conread position: 6-294
Cow position: chr18:23716122-23716413 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 212
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 70, 146

Conread position: 8-169
Cow position: chr18:33158075-33157906 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 55, 146

Conread position: 8-180
Cow position: chr18:14047906-14047725 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 54, 147

Conread position: 8-188
Cow position: chr18:29059282-29059469 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 150
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 53, 144

Conread position: 8-288
Cow position: chr18:43464232-43464522 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 204
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 11, 56

Conread position: 8-290
Cow position: chr18:43284780-43285057 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 194
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 52, 106

Conread position: 8-294
Cow position: chr18:51654134-51653845 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 201
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 54, 126

Conread position: 8-294
Cow position: chr18:52629719-52630013 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 208
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 54, 102

Conread position: 9-295
Cow position: chr18:23802561-23802267 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 206
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 61, 54

Conread position: 9-314
Cow position: chr18:16226760-16226456 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 214
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 54, 154

Conread position: 10-237
Cow position: chr18:51464958-51465196 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 59, 146

Conread position: 11-295
Cow position: chr18:33406844-33406552 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 141

Conread position: 12-290
Cow position: chr18:17335206-17335486 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 213
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 56, 51

Conread position: 12-294
Cow position: chr18:17323910-17323625 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 51, 105

Conread position: 15-289
Cow position: chr18:10896720-10896444 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 187
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 56, 119

Show alignments to all cow chromosomes.