Cow genome map


           Conread name:
           Thy1-THY010009G06
        

               Conread position:
               1-181
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               69, 120
               

               Conread position:
               1-268
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               69, 152
               

               Conread position:
               1-289
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               78, 58
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               80, 152
               

               Conread position:
               1-295
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               67, 62
               

               Conread position:
               2-143
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               2-155
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               2-160
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               69, 107
               

               Conread position:
               2-183
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               73, 44
               

               Conread position:
               2-202
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               61, 161
               

               Conread position:
               2-204
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               61, 200
               

               Conread position:
               2-252
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               60, 116
               

               Conread position:
               2-259
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               59, 148
               

               Conread position:
               2-273
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 142
               

               Conread position:
               2-276
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               206
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               61, 152
               

               Conread position:
               2-282
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 136
               

               Conread position:
               2-288
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 128
               

               Conread position:
               2-290
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 153
               

               Conread position:
               2-290
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 47
               

               Conread position:
               2-290
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 61
               

               Conread position:
               2-290
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               2-290
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 114
               

               Conread position:
               2-290
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 151
               

               Conread position:
               2-293
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 94
               

               Conread position:
               2-293
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 144
               

               Conread position:
               2-293
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 149
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 152
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               61, 153
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               216
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               62, 115
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               73, 132
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               59, 149
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               61, 144
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               214
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               61, 152
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 151
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 152
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               216
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               73, 25
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 27
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               73, 115
               

               Conread position:
               2-295
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 120
               

               Conread position:
               2-295
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 121
               

               Conread position:
               2-295
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               222
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               61, 91
               

               Conread position:
               2-307
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 61
               

               Conread position:
               3-238
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               66, 133
               

               Conread position:
               3-252
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               60, 152
               

               Conread position:
               3-265
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               65, 50
               

               Conread position:
               3-290
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               60, 151
               

               Conread position:
               3-293
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-293
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               78, 151
               

               Conread position:
               3-293
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               60, 131
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               60, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               211
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               212
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               59, 182
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               59, 149
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               214
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               60, 148
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               60, 149
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               60, 145
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               210
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               59, 149
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               210
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               60, 149
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               210
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               78, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               60, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               60, 149
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               59, 149
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 152
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               60, 45
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               207
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               60, 149
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               50, 148
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               60, 182
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-296
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               60, 143
               

               Conread position:
               3-315
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               59, 153
               

               Conread position:
               4-294
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 152
               

               Conread position:
               8-151
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               8-242
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 139
               

               Conread position:
               8-287
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               55, 141
               

               Conread position:
               8-288
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               55, 151
               

               Conread position:
               8-294
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 150
               

               Conread position:
               8-294
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               53, 149
               

               Conread position:
               8-294
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               214
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               54, 155
               

               Conread position:
               8-311
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               68, 126
               

               Conread position:
               9-205
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               54, 106
               

               Conread position:
               9-245
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               54, 121
               

               Conread position:
               10-293
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 153
               

               Conread position:
               10-294
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               64, 137
               

               Conread position:
               10-294
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 142
               

               Conread position:
               11-180
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               49, 136
               

               Conread position:
               11-293
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               49, 208
               

               Conread position:
               11-300
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               212
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               52, 142
               

               Conread position:
               13-294
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               62, 162
               
Show alignments to all cow chromosomes.