Cow genome map

Conread name: Thy1-THY010009G06

Conread position: 1-287
Cow position:
Alignm length: 296
Alignm identity: 213
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 75, 152

Conread position: 1-294
Cow position:
Alignm length: 305
Alignm identity: 206
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 75, 117

Conread position: 1-294
Cow position:
Alignm length: 306
Alignm identity: 204
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 52, 154

Conread position: 1-294
Cow position:
Alignm length: 303
Alignm identity: 213
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 60, 144

Conread position: 1-294
Cow position:
Alignm length: 303
Alignm identity: 206
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 59, 107

Conread position: 1-294
Cow position:
Alignm length: 304
Alignm identity: 213
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 67, 62

Conread position: 1-294
Cow position:
Alignm length: 311
Alignm identity: 212
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 68, 62

Conread position: 1-295
Cow position:
Alignm length: 304
Alignm identity: 197
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 62, 117

Conread position: 1-318
Cow position:
Alignm length: 328
Alignm identity: 220
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 60, 113

Conread position: 2-134
Cow position:
Alignm length: 137
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 74, 0

Conread position: 2-141
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 2-162
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 61, 151

Conread position: 2-182
Cow position:
Alignm length: 190
Alignm identity: 146
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 58, 119

Conread position: 2-184
Cow position:
Alignm length: 192
Alignm identity: 138
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 69, 108

Conread position: 2-202
Cow position:
Alignm length: 211
Alignm identity: 155
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 73, 161

Conread position: 2-203
Cow position:
Alignm length: 209
Alignm identity: 147
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 73, 147

Conread position: 2-203
Cow position:
Alignm length: 211
Alignm identity: 149
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 61, 175

Conread position: 2-230
Cow position:
Alignm length: 237
Alignm identity: 169
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 60, 180

Conread position: 2-247
Cow position:
Alignm length: 256
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 152

Conread position: 2-252
Cow position:
Alignm length: 260
Alignm identity: 179
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 61, 143

Conread position: 2-261
Cow position:
Alignm length: 269
Alignm identity: 187
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 61, 151

Conread position: 2-265
Cow position:
Alignm length: 273
Alignm identity: 207
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 61, 152

Conread position: 2-272
Cow position:
Alignm length: 282
Alignm identity: 191
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 61, 150

Conread position: 2-276
Cow position:
Alignm length: 284
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 61

Conread position: 2-277
Cow position:
Alignm length: 284
Alignm identity: 187
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 73, 102

Conread position: 2-286
Cow position:
Alignm length: 294
Alignm identity: 200
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 61, 108

Conread position: 2-287
Cow position:
Alignm length: 306
Alignm identity: 213
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 18, 154

Conread position: 2-288
Cow position:
Alignm length: 297
Alignm identity: 196
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 60, 161

Conread position: 2-289
Cow position:
Alignm length: 297
Alignm identity: 213
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 61, 144

Conread position: 2-290
Cow position:
Alignm length: 303
Alignm identity: 222
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 59, 150

Conread position: 2-290
Cow position:
Alignm length: 293
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 29

Conread position: 2-290
Cow position:
Alignm length: 291
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 86

Conread position: 2-294
Cow position:
Alignm length: 304
Alignm identity: 219
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 66, 61

Conread position: 2-294
Cow position:
Alignm length: 304
Alignm identity: 210
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 61, 151

Conread position: 2-294
Cow position:
Alignm length: 296
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 155

Conread position: 2-294
Cow position:
Alignm length: 302
Alignm identity: 213
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 59, 150

Conread position: 2-294
Cow position:
Alignm length: 309
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 153

Conread position: 2-294
Cow position:
Alignm length: 302
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 150

Conread position: 2-294
Cow position:
Alignm length: 302
Alignm identity: 212
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 61, 149

Conread position: 2-294
Cow position:
Alignm length: 303
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 152

Conread position: 2-294
Cow position:
Alignm length: 302
Alignm identity: 214
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 61, 175

Conread position: 2-294
Cow position:
Alignm length: 302
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 152

Conread position: 2-294
Cow position:
Alignm length: 304
Alignm identity: 206
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 61, 151

Conread position: 2-294
Cow position:
Alignm length: 302
Alignm identity: 209
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 61, 182

Conread position: 2-294
Cow position:
Alignm length: 303
Alignm identity: 213
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 60, 152

Conread position: 2-294
Cow position:
Alignm length: 302
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 150

Conread position: 2-294
Cow position:
Alignm length: 301
Alignm identity: 212
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 73, 107

Conread position: 2-294
Cow position:
Alignm length: 309
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 61

Conread position: 2-294
Cow position:
Alignm length: 302
Alignm identity: 213
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 60, 152

Conread position: 2-294
Cow position:
Alignm length: 302
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 152

Conread position: 2-294
Cow position:
Alignm length: 302
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 150

Conread position: 2-294
Cow position:
Alignm length: 305
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 22

Conread position: 2-294
Cow position:
Alignm length: 300
Alignm identity: 206
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 60, 147

Conread position: 2-300
Cow position:
Alignm length: 309
Alignm identity: 212
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 61, 161

Conread position: 2-302
Cow position:
Alignm length: 310
Alignm identity: 218
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 73, 25

Conread position: 2-303
Cow position:
Alignm length: 306
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 195

Conread position: 2-308
Cow position:
Alignm length: 316
Alignm identity: 209
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 61, 223

Conread position: 2-313
Cow position:
Alignm length: 323
Alignm identity: 236
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 62, 111

Conread position: 3-140
Cow position:
Alignm length: 143
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 3-226
Cow position:
Alignm length: 233
Alignm identity: 156
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 151

Conread position: 3-227
Cow position:
Alignm length: 235
Alignm identity: 163
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 59, 148

Conread position: 3-236
Cow position:
Alignm length: 243
Alignm identity: 165
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 59, 151

Conread position: 3-246
Cow position:
Alignm length: 253
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 39

Conread position: 3-258
Cow position:
Alignm length: 265
Alignm identity: 180
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 59, 151

Conread position: 3-277
Cow position:
Alignm length: 284
Alignm identity: 159
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 59, 182

Conread position: 3-277
Cow position:
Alignm length: 284
Alignm identity: 188
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 60, 182

Conread position: 3-279
Cow position:
Alignm length: 286
Alignm identity: 194
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 68, 151

Conread position: 3-284
Cow position:
Alignm length: 291
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 151

Conread position: 3-287
Cow position:
Alignm length: 294
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 149

Conread position: 3-289
Cow position:
Alignm length: 291
Alignm identity: 202
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 72, 127

Conread position: 3-290
Cow position:
Alignm length: 297
Alignm identity: 203
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 59, 151

Conread position: 3-290
Cow position:
Alignm length: 297
Alignm identity: 204
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 60, 149

Conread position: 3-290
Cow position:
Alignm length: 298
Alignm identity: 206
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 60, 149

Conread position: 3-290
Cow position:
Alignm length: 297
Alignm identity: 207
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 60, 149

Conread position: 3-290
Cow position:
Alignm length: 298
Alignm identity: 201
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 60, 149

Conread position: 3-293
Cow position:
Alignm length: 300
Alignm identity: 208
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 59, 113

Conread position: 3-293
Cow position:
Alignm length: 298
Alignm identity: 202
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 60, 116

Conread position: 3-293
Cow position:
Alignm length: 301
Alignm identity: 212
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 59, 149

Conread position: 3-293
Cow position:
Alignm length: 299
Alignm identity: 209
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 58, 131

Conread position: 3-294
Cow position:
Alignm length: 301
Alignm identity: 212
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position:
Alignm length: 303
Alignm identity: 208
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 60, 150

Conread position: 3-294
Cow position:
Alignm length: 301
Alignm identity: 209
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position:
Alignm length: 302
Alignm identity: 205
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 60, 149

Conread position: 3-294
Cow position:
Alignm length: 302
Alignm identity: 210
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position:
Alignm length: 301
Alignm identity: 206
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 60, 154

Conread position: 3-294
Cow position:
Alignm length: 305
Alignm identity: 210
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 61, 149

Conread position: 3-294
Cow position:
Alignm length: 301
Alignm identity: 209
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 59, 182

Conread position: 3-294
Cow position:
Alignm length: 299
Alignm identity: 209
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 60, 109

Conread position: 3-294
Cow position:
Alignm length: 295
Alignm identity: 203
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 123, 71

Conread position: 3-294
Cow position:
Alignm length: 302
Alignm identity: 201
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 60, 91

Conread position: 3-294
Cow position:
Alignm length: 301
Alignm identity: 212
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 59, 112

Conread position: 3-294
Cow position:
Alignm length: 301
Alignm identity: 210
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 60, 151

Conread position: 3-294
Cow position:
Alignm length: 302
Alignm identity: 203
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 60, 148

Conread position: 3-294
Cow position:
Alignm length: 302
Alignm identity: 208
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 60, 149

Conread position: 3-294
Cow position:
Alignm length: 301
Alignm identity: 212
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 60, 151

Conread position: 3-294
Cow position:
Alignm length: 301
Alignm identity: 211
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position:
Alignm length: 301
Alignm identity: 207
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position:
Alignm length: 301
Alignm identity: 213
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 59, 149

Conread position: 3-294
Cow position:
Alignm length: 295
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 56

Conread position: 3-294
Cow position:
Alignm length: 296
Alignm identity: 207
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 72, 59

Conread position: 3-294
Cow position:
Alignm length: 302
Alignm identity: 211
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 60, 149

Conread position: 3-294
Cow position:
Alignm length: 302
Alignm identity: 211
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 59, 149

Conread position: 3-294
Cow position:
Alignm length: 300
Alignm identity: 213
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 68, 150

Conread position: 3-294
Cow position:
Alignm length: 302
Alignm identity: 209
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 60, 183

Conread position: 3-294
Cow position:
Alignm length: 301
Alignm identity: 205
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 59, 182

Conread position: 3-294
Cow position:
Alignm length: 301
Alignm identity: 212
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position:
Alignm length: 301
Alignm identity: 213
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 72, 115

Conread position: 3-294
Cow position:
Alignm length: 302
Alignm identity: 205
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 59, 149

Conread position: 3-294
Cow position:
Alignm length: 302
Alignm identity: 205
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 60, 182

Conread position: 3-294
Cow position:
Alignm length: 301
Alignm identity: 202
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 60, 149

Conread position: 3-294
Cow position:
Alignm length: 301
Alignm identity: 210
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position:
Alignm length: 302
Alignm identity: 206
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 78, 152

Conread position: 6-268
Cow position:
Alignm length: 264
Alignm identity: 174
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 57, 82

Conread position: 6-294
Cow position:
Alignm length: 299
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 104

Conread position: 6-317
Cow position:
Alignm length: 320
Alignm identity: 205
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 69, 177

Conread position: 8-201
Cow position:
Alignm length: 204
Alignm identity: 148
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 55, 146

Conread position: 8-245
Cow position:
Alignm length: 248
Alignm identity: 176
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 48, 154

Conread position: 8-269
Cow position:
Alignm length: 272
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 140

Conread position: 8-290
Cow position:
Alignm length: 292
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 138

Conread position: 8-292
Cow position:
Alignm length: 292
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 125

Conread position: 8-293
Cow position:
Alignm length: 295
Alignm identity: 210
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 55, 143

Conread position: 8-294
Cow position:
Alignm length: 290
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 55

Conread position: 8-294
Cow position:
Alignm length: 296
Alignm identity: 208
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 67, 149

Conread position: 8-294
Cow position:
Alignm length: 296
Alignm identity: 206
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 55, 144

Conread position: 8-294
Cow position:
Alignm length: 297
Alignm identity: 210
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 58, 146

Conread position: 8-297
Cow position:
Alignm length: 300
Alignm identity: 201
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 55, 143

Conread position: 9-290
Cow position:
Alignm length: 294
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 146

Conread position: 9-294
Cow position:
Alignm length: 297
Alignm identity: 207
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 47, 144

Conread position: 9-294
Cow position:
Alignm length: 296
Alignm identity: 204
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 50, 155

Conread position: 9-306
Cow position:
Alignm length: 308
Alignm identity: 206
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 54, 143

Conread position: 9-306
Cow position:
Alignm length: 308
Alignm identity: 205
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 54, 143

Conread position: 10-251
Cow position:
Alignm length: 250
Alignm identity: 178
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 61, 135

Conread position: 10-295
Cow position:
Alignm length: 295
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 142

Conread position: 11-261
Cow position:
Alignm length: 256
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 136

Conread position: 11-294
Cow position:
Alignm length: 292
Alignm identity: 200
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 52, 127

Conread position: 12-169
Cow position:
Alignm length: 166
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 63, 110

Conread position: 12-294
Cow position:
Alignm length: 292
Alignm identity: 200
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 51, 140

Conread position: 17-166
Cow position:
Alignm length: 153
Alignm identity: 120
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 59, 131

Conread position: 18-294
Cow position:
Alignm length: 288
Alignm identity: 199
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 45, 148

Conread position: 21-288
Cow position:
Alignm length: 276
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 97

Conread position: 25-315
Cow position:
Alignm length: 303
Alignm identity: 212
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 43, 38

Conread position: 27-212
Cow position:
Alignm length: 195
Alignm identity: 151
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 36, 127

Conread position: 33-287
Cow position:
Alignm length: 262
Alignm identity: 188
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 38, 119

Conread position: 551-778
Cow position:
Alignm length: 231
Alignm identity: 176
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 150, 55

Show alignments to all cow chromosomes.