Cow genome map
| Conread name: | Thy1-THY010009G06 |
| Conread position: | 1-290 |
| Cow position: | chr23:29625424-29625122 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 109 |
| Conread position: | 1-294 |
| Cow position: | chr23:1338048-1338344 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 62, 131 |
| Conread position: | 1-294 |
| Cow position: | chr23:20389576-20389877 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 111 |
| Conread position: | 2-152 |
| Cow position: | chr23:29471865-29472024 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 2-182 |
| Cow position: | chr23:11405241-11405428 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 66, 151 |
| Conread position: | 2-205 |
| Cow position: | chr23:20541412-20541209 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 61, 168 |
| Conread position: | 2-235 |
| Cow position: | chr23:1321952-1322191 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 69, 155 |
| Conread position: | 2-276 |
| Cow position: | chr23:16057141-16056862 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 61, 150 |
| Conread position: | 2-278 |
| Cow position: | chr23:20025378-20025094 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 61, 152 |
| Conread position: | 2-278 |
| Cow position: | chr23:36308648-36308373 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 61, 112 |
| Conread position: | 2-289 |
| Cow position: | chr23:6173576-6173869 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 144 |
| Conread position: | 2-290 |
| Cow position: | chr23:345025-345307 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 221 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 74, 108 |
| Conread position: | 2-290 |
| Cow position: | chr23:1311126-1311423 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 216 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 61, 150 |
| Conread position: | 2-290 |
| Cow position: | chr23:4516978-4516689 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 5, 133 |
| Conread position: | 2-290 |
| Cow position: | chr23:7359901-7359609 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 153 |
| Conread position: | 2-293 |
| Cow position: | chr23:25357790-25357491 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 152 |
| Conread position: | 2-293 |
| Cow position: | chr23:25554036-25553737 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 73, 140 |
| Conread position: | 2-294 |
| Cow position: | chr23:3286203-3285903 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 60, 113 |
| Conread position: | 2-294 |
| Cow position: | chr23:11078722-11078422 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 104 |
| Conread position: | 2-294 |
| Cow position: | chr23:14839744-14840025 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 222 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 73, 152 |
| Conread position: | 2-294 |
| Cow position: | chr23:16999884-16999589 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 59, 184 |
| Conread position: | 2-294 |
| Cow position: | chr23:33817891-33817589 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 73, 15 |
| Conread position: | 2-298 |
| Cow position: | chr23:1325871-1326170 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 217 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 61, 150 |
| Conread position: | 3-223 |
| Cow position: | chr23:40553679-40553907 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 59, 149 |
| Conread position: | 3-224 |
| Cow position: | chr23:2528953-2529182 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 59, 182 |
| Conread position: | 3-230 |
| Cow position: | chr23:29446506-29446738 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 60, 152 |
| Conread position: | 3-245 |
| Cow position: | chr23:24098571-24098321 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 72, 149 |
| Conread position: | 3-283 |
| Cow position: | chr23:31833560-31833844 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 151 |
| Conread position: | 3-289 |
| Cow position: | chr23:14959514-14959802 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 67, 60 |
| Conread position: | 3-290 |
| Cow position: | chr23:11376874-11377169 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 60, 149 |
| Conread position: | 3-290 |
| Cow position: | chr23:25351803-25351508 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 59, 151 |
| Conread position: | 3-290 |
| Cow position: | chr23:30623058-30623349 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 60, 148 |
| Conread position: | 3-290 |
| Cow position: | chr23:36027809-36028104 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 60, 149 |
| Conread position: | 3-293 |
| Cow position: | chr23:4636912-4637210 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 209 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 60, 182 |
| Conread position: | 3-293 |
| Cow position: | chr23:15529030-15528732 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 60, 151 |
| Conread position: | 3-294 |
| Cow position: | chr23:671615-671316 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 210 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 59, 151 |
| Conread position: | 3-294 |
| Cow position: | chr23:771048-771347 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 60, 151 |
| Conread position: | 3-294 |
| Cow position: | chr23:954357-954652 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 59, 151 |
| Conread position: | 3-294 |
| Cow position: | chr23:1959570-1959272 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 60, 149 |
| Conread position: | 3-294 |
| Cow position: | chr23:2023641-2023940 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 60, 149 |
| Conread position: | 3-294 |
| Cow position: | chr23:2472857-2473156 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 59, 151 |
| Conread position: | 3-294 |
| Cow position: | chr23:2761341-2761043 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 72, 149 |
| Conread position: | 3-294 |
| Cow position: | chr23:4892139-4891840 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 60, 149 |
| Conread position: | 3-294 |
| Cow position: | chr23:5441360-5441062 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 59, 154 |
| Conread position: | 3-294 |
| Cow position: | chr23:5624136-5624428 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 203 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 60, 147 |
| Conread position: | 3-294 |
| Cow position: | chr23:10679390-10679689 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 210 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 78, 151 |
| Conread position: | 3-294 |
| Cow position: | chr23:10936853-10937158 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 59, 157 |
| Conread position: | 3-294 |
| Cow position: | chr23:11079828-11079528 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 3-294 |
| Cow position: | chr23:11128461-11128163 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 61, 158 |
| Conread position: | 3-294 |
| Cow position: | chr23:11343940-11343641 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 60, 149 |
| Conread position: | 3-294 |
| Cow position: | chr23:11782229-11781929 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 60, 149 |
| Conread position: | 3-294 |
| Cow position: | chr23:14215791-14216080 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 60, 100 |
| Conread position: | 3-294 |
| Cow position: | chr23:14265786-14265491 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 59, 128 |
| Conread position: | 3-294 |
| Cow position: | chr23:15180401-15180103 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 61, 148 |
| Conread position: | 3-294 |
| Cow position: | chr23:17846434-17846142 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 60, 146 |
| Conread position: | 3-294 |
| Cow position: | chr23:19493292-19492993 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 209 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 60, 151 |
| Conread position: | 3-294 |
| Cow position: | chr23:20152777-20153077 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 59, 151 |
| Conread position: | 3-294 |
| Cow position: | chr23:21772466-21772766 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 215 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 59, 151 |
| Conread position: | 3-294 |
| Cow position: | chr23:26828692-26828397 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 59, 131 |
| Conread position: | 3-294 |
| Cow position: | chr23:27313288-27312989 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 213 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 59, 182 |
| Conread position: | 3-294 |
| Cow position: | chr23:27402577-27402281 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 205 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 69, 60 |
| Conread position: | 3-294 |
| Cow position: | chr23:29043227-29042927 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 209 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 60, 152 |
| Conread position: | 3-294 |
| Cow position: | chr23:30634151-30634450 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 60, 149 |
| Conread position: | 3-294 |
| Cow position: | chr23:31605871-31605572 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 209 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 59, 151 |
| Conread position: | 3-294 |
| Cow position: | chr23:31704338-31704039 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 58, 182 |
| Conread position: | 3-294 |
| Cow position: | chr23:37199067-37199369 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 59, 148 |
| Conread position: | 3-294 |
| Cow position: | chr23:41015372-41015073 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 209 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 59, 151 |
| Conread position: | 8-259 |
| Cow position: | chr23:1535561-1535305 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 55, 144 |
| Conread position: | 8-289 |
| Cow position: | chr23:38584356-38584068 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 55, 149 |
| Conread position: | 8-290 |
| Cow position: | chr23:16495838-16496127 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 54, 138 |
| Conread position: | 8-290 |
| Cow position: | chr23:40890209-40889925 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 261 |
| Conread position: | 8-292 |
| Cow position: | chr23:416365-416074 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 144 |
| Conread position: | 8-293 |
| Cow position: | chr23:17404052-17403758 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 146 |
| Conread position: | 8-293 |
| Cow position: | chr23:29459815-29460106 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 149 |
| Conread position: | 8-294 |
| Cow position: | chr23:6593497-6593780 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 97 |
| Conread position: | 8-294 |
| Cow position: | chr23:15215399-15215690 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 55, 138 |
| Conread position: | 8-310 |
| Cow position: | chr23:8290892-8290591 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 55, 118 |
| Conread position: | 9-290 |
| Cow position: | chr23:28915765-28915481 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 53, 104 |
| Conread position: | 9-290 |
| Cow position: | chr23:30243925-30243650 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 202 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 61, 79 |
| Conread position: | 9-294 |
| Cow position: | chr23:2180412-2180702 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 214 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 54, 21 |
| Conread position: | 16-289 |
| Cow position: | chr23:25670354-25670622 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 134 |
| Conread position: | 27-265 |
| Cow position: | chr23:3167470-3167215 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 37, 131 |
Show alignments to all cow chromosomes.