Cow genome map

Conread name: Thy1-THY010009G06

Conread position: 1-294
Cow position: chr24:6415700-6415401 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 222
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 67, 62

Conread position: 1-294
Cow position: chr24:19643826-19643531 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 207
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 67, 62

Conread position: 1-294
Cow position: chr24:26847068-26847366 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 207
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 57, 162

Conread position: 1-294
Cow position: chr24:38641908-38641612 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 202
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 55, 108

Conread position: 1-294
Cow position: chr24:39956572-39956865 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 202
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 67, 62

Conread position: 2-157
Cow position: chr24:31815791-31815633 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 73, 55

Conread position: 2-166
Cow position: chr24:16646397-16646565 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 23, 0

Conread position: 2-170
Cow position: chr24:27762782-27762604 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 73, 107

Conread position: 2-204
Cow position: chr24:30765860-30765649 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 77, 153

Conread position: 2-204
Cow position: chr24:39258379-39258176 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 66, 61

Conread position: 2-212
Cow position: chr24:29064432-29064651 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 170
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 69, 152

Conread position: 2-252
Cow position: chr24:30893331-30893585 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 188
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 55, 152

Conread position: 2-259
Cow position: chr24:36710375-36710114 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 73, 149

Conread position: 2-265
Cow position: chr24:14609340-14609599 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 195
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 61, 147

Conread position: 2-276
Cow position: chr24:16266989-16266712 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 143

Conread position: 2-276
Cow position: chr24:25991918-25992186 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 207
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 57, 148

Conread position: 2-276
Cow position: chr24:28336526-28336802 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 199
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 61, 12

Conread position: 2-286
Cow position: chr24:9071310-9071596 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 201
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 61, 132

Conread position: 2-287
Cow position: chr24:31381924-31381643 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 213
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 61, 144

Conread position: 2-287
Cow position: chr24:35067245-35067533 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 201
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 60, 150

Conread position: 2-288
Cow position: chr24:28497598-28497889 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 120

Conread position: 2-290
Cow position: chr24:12202980-12203269 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 197
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 67, 131

Conread position: 2-290
Cow position: chr24:17368387-17368684 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 117

Conread position: 2-290
Cow position: chr24:28688948-28688671 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 219
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 73, 132

Conread position: 2-290
Cow position: chr24:29179897-29179607 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 144

Conread position: 2-290
Cow position: chr24:31357127-31356842 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 125

Conread position: 2-290
Cow position: chr24:45087060-45086764 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 210
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 51, 150

Conread position: 2-294
Cow position: chr24:6524533-6524234 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 93

Conread position: 2-294
Cow position: chr24:12332170-12332470 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 204
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 60, 145

Conread position: 2-294
Cow position: chr24:15372309-15372017 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 29

Conread position: 2-294
Cow position: chr24:16908834-16908541 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 200
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 150

Conread position: 2-294
Cow position: chr24:17566381-17566088 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 214
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 61, 180

Conread position: 2-294
Cow position: chr24:32608848-32608548 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 161

Conread position: 2-294
Cow position: chr24:36036294-36036589 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 168

Conread position: 2-294
Cow position: chr24:38814182-38813884 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 211
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 61, 151

Conread position: 2-294
Cow position: chr24:45003952-45003665 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 221
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 58, 132

Conread position: 2-295
Cow position: chr24:26388372-26388657 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 205
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 123, 61

Conread position: 2-298
Cow position: chr24:18266956-18267256 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 143

Conread position: 3-205
Cow position: chr24:34761045-34760833 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 59, 149

Conread position: 3-238
Cow position: chr24:30870433-30870676 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 166
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 60, 149

Conread position: 3-265
Cow position: chr24:2948095-2947826 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 183
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 59, 151

Conread position: 3-288
Cow position: chr24:12347858-12348150 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 197
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 59, 148

Conread position: 3-290
Cow position: chr24:9549798-9549505 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 205
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 59, 142

Conread position: 3-290
Cow position: chr24:18222943-18223239 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 204
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 60, 151

Conread position: 3-290
Cow position: chr24:29190819-29190529 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 205
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 60, 149

Conread position: 3-290
Cow position: chr24:32853748-32853453 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 203
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 60, 149

Conread position: 3-290
Cow position: chr24:38296592-38296297 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 59, 151

Conread position: 3-291
Cow position: chr24:3794018-3793722 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 211
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 60, 149

Conread position: 3-293
Cow position: chr24:9380501-9380211 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 200
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 73, 109

Conread position: 3-293
Cow position: chr24:36027979-36028276 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 208
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 60, 151

Conread position: 3-294
Cow position: chr24:5279748-5279449 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr24:5862818-5863116 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 215
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 60, 150

Conread position: 3-294
Cow position: chr24:5929315-5929016 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 212
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr24:5990651-5990946 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 210
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr24:6067808-6068101 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 203
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 59, 97

Conread position: 3-294
Cow position: chr24:6413014-6412715 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 207
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 59, 149

Conread position: 3-294
Cow position: chr24:7959980-7960279 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 59, 182

Conread position: 3-294
Cow position: chr24:8431903-8431609 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 60, 145

Conread position: 3-294
Cow position: chr24:8607865-8607566 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 205
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 60, 151

Conread position: 3-294
Cow position: chr24:11208071-11208370 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr24:13235801-13235506 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 207
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 59, 149

Conread position: 3-294
Cow position: chr24:14250048-14250346 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 205
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 59, 143

Conread position: 3-294
Cow position: chr24:15296651-15296352 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 213
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 60, 151

Conread position: 3-294
Cow position: chr24:16558749-16559042 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 60, 144

Conread position: 3-294
Cow position: chr24:19688052-19688342 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 194
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 60, 144

Conread position: 3-294
Cow position: chr24:20283676-20283973 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 209
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 60, 149

Conread position: 3-294
Cow position: chr24:20604285-20603986 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr24:22795094-22794796 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 206
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 59, 139

Conread position: 3-294
Cow position: chr24:22954098-22953799 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 213
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr24:22975343-22975045 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 200
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 59, 147

Conread position: 3-294
Cow position: chr24:29084128-29084428 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 201
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 60, 151

Conread position: 3-294
Cow position: chr24:30681597-30681885 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 60, 151

Conread position: 3-294
Cow position: chr24:38588319-38588019 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 200
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 60, 153

Conread position: 3-294
Cow position: chr24:40428158-40428457 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 59, 151

Conread position: 3-294
Cow position: chr24:40466877-40467176 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 205
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 59, 149

Conread position: 3-294
Cow position: chr24:41062990-41062690 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 151

Conread position: 3-296
Cow position: chr24:32823586-32823888 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 149

Conread position: 3-310
Cow position: chr24:207460-207772 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 220
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 61, 151

Conread position: 6-294
Cow position: chr24:36779803-36779508 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 210
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 55, 178

Conread position: 8-184
Cow position: chr24:39482697-39482518 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 146
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 67, 134

Conread position: 8-265
Cow position: chr24:45009714-45009453 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 186

Conread position: 8-290
Cow position: chr24:14336392-14336108 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 193
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 64, 106

Conread position: 8-294
Cow position: chr24:1841341-1841635 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 204
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 54, 177

Conread position: 8-294
Cow position: chr24:14194318-14194611 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 201
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 55, 146

Conread position: 8-294
Cow position: chr24:25698469-25698182 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 204
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 54, 109

Conread position: 8-294
Cow position: chr24:35823674-35823968 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 205
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 55, 144

Conread position: 8-294
Cow position: chr24:40552150-40551862 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 194
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 55, 96

Conread position: 9-164
Cow position: chr24:45216900-45217063 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 54, 143

Conread position: 10-274
Cow position: chr24:31758763-31759031 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 205
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 65, 142

Conread position: 10-294
Cow position: chr24:25439734-25439439 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 58, 292

Conread position: 11-253
Cow position: chr24:42944140-42944377 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 52, 19

Conread position: 12-290
Cow position: chr24:33122453-33122168 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 212
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 56, 51

Conread position: 12-318
Cow position: chr24:40036427-40036743 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 142

Conread position: 37-289
Cow position: chr24:29181854-29181600 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 117

Show alignments to all cow chromosomes.