Cow genome map
| Conread name: | Thy1-THY010009G06 |
| Conread position: | 1-290 |
| Cow position: | chr26:25340447-25340738 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 68, 149 |
| Conread position: | 1-294 |
| Cow position: | chr26:624726-625015 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 62, 125 |
| Conread position: | 2-147 |
| Cow position: | chr26:16719966-16719810 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 2-174 |
| Cow position: | chr26:8352228-8352051 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 51, 123 |
| Conread position: | 2-244 |
| Cow position: | chr26:14173553-14173303 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 187 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 73, 152 |
| Conread position: | 2-276 |
| Cow position: | chr26:4324231-4324506 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 61, 154 |
| Conread position: | 2-276 |
| Cow position: | chr26:16781665-16781383 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 274 |
| Conread position: | 2-279 |
| Cow position: | chr26:9835961-9835673 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 152 |
| Conread position: | 2-286 |
| Cow position: | chr26:21859074-21858800 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 73, 104 |
| Conread position: | 2-287 |
| Cow position: | chr26:10699022-10699299 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 45 |
| Conread position: | 2-289 |
| Cow position: | chr26:17182551-17182278 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 124, 61 |
| Conread position: | 2-290 |
| Cow position: | chr26:21350991-21350699 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 61, 212 |
| Conread position: | 2-290 |
| Cow position: | chr26:34031044-34030755 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 79, 107 |
| Conread position: | 2-294 |
| Cow position: | chr26:1621137-1620845 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 75, 122 |
| Conread position: | 2-294 |
| Cow position: | chr26:1885500-1885202 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 217 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 69, 117 |
| Conread position: | 2-294 |
| Cow position: | chr26:3833524-3833224 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 61, 152 |
| Conread position: | 2-294 |
| Cow position: | chr26:3923993-3924283 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 73, 12 |
| Conread position: | 2-294 |
| Cow position: | chr26:19795543-19795243 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 219 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 73, 152 |
| Conread position: | 2-294 |
| Cow position: | chr26:20186791-20186512 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 2-294 |
| Cow position: | chr26:20256113-20255819 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 73, 148 |
| Conread position: | 2-294 |
| Cow position: | chr26:27987109-27987400 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 212 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 18, 62 |
| Conread position: | 2-294 |
| Cow position: | chr26:34265454-34265154 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 60, 152 |
| Conread position: | 2-310 |
| Cow position: | chr26:614706-615031 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 73, 140 |
| Conread position: | 3-157 |
| Cow position: | chr26:12965376-12965527 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 9, 61 |
| Conread position: | 3-227 |
| Cow position: | chr26:3026951-3027182 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 59, 115 |
| Conread position: | 3-252 |
| Cow position: | chr26:20019590-20019333 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 59, 151 |
| Conread position: | 3-252 |
| Cow position: | chr26:26611945-26611688 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 59, 151 |
| Conread position: | 3-288 |
| Cow position: | chr26:1390471-1390178 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 60, 151 |
| Conread position: | 3-290 |
| Cow position: | chr26:3862590-3862884 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 68, 107 |
| Conread position: | 3-290 |
| Cow position: | chr26:5680021-5679724 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 60, 151 |
| Conread position: | 3-290 |
| Cow position: | chr26:6843731-6844026 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 60, 154 |
| Conread position: | 3-290 |
| Cow position: | chr26:8084315-8084020 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 59, 151 |
| Conread position: | 3-290 |
| Cow position: | chr26:8356014-8356305 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 79, 160 |
| Conread position: | 3-290 |
| Cow position: | chr26:15892464-15892173 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 12, 99 |
| Conread position: | 3-290 |
| Cow position: | chr26:35423986-35423693 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 60, 143 |
| Conread position: | 3-294 |
| Cow position: | chr26:387169-386870 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 213 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 60, 151 |
| Conread position: | 3-294 |
| Cow position: | chr26:1088666-1088374 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 144 |
| Conread position: | 3-294 |
| Cow position: | chr26:1342806-1343105 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 210 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 59, 151 |
| Conread position: | 3-294 |
| Cow position: | chr26:3564550-3564850 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 58, 182 |
| Conread position: | 3-294 |
| Cow position: | chr26:4728836-4729134 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 59, 107 |
| Conread position: | 3-294 |
| Cow position: | chr26:7559127-7559426 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 60, 182 |
| Conread position: | 3-294 |
| Cow position: | chr26:8738928-8739227 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 59, 154 |
| Conread position: | 3-294 |
| Cow position: | chr26:8885332-8885034 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 59, 198 |
| Conread position: | 3-294 |
| Cow position: | chr26:9070051-9069751 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 59, 151 |
| Conread position: | 3-294 |
| Cow position: | chr26:9115527-9115229 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 68, 150 |
| Conread position: | 3-294 |
| Cow position: | chr26:12585049-12585348 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 68, 151 |
| Conread position: | 3-294 |
| Cow position: | chr26:13183799-13183501 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 59, 151 |
| Conread position: | 3-294 |
| Cow position: | chr26:14487772-14488065 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 57, 131 |
| Conread position: | 3-294 |
| Cow position: | chr26:15199516-15199218 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 60, 154 |
| Conread position: | 3-294 |
| Cow position: | chr26:17428986-17429285 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 60, 149 |
| Conread position: | 3-294 |
| Cow position: | chr26:18803880-18804180 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 60, 152 |
| Conread position: | 3-294 |
| Cow position: | chr26:18857604-18857310 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 206 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 72, 146 |
| Conread position: | 3-294 |
| Cow position: | chr26:20497019-20496726 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 60, 149 |
| Conread position: | 3-294 |
| Cow position: | chr26:30594140-30594439 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 59, 151 |
| Conread position: | 3-294 |
| Cow position: | chr26:35191059-35191357 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 59, 151 |
| Conread position: | 3-300 |
| Cow position: | chr26:7459473-7459779 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 68, 292 |
| Conread position: | 3-310 |
| Cow position: | chr26:26286349-26286032 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 58, 152 |
| Conread position: | 6-166 |
| Cow position: | chr26:20299515-20299673 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 120, 138 |
| Conread position: | 6-232 |
| Cow position: | chr26:6476191-6476422 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 65, 153 |
| Conread position: | 7-293 |
| Cow position: | chr26:25393272-25392987 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 148 |
| Conread position: | 8-180 |
| Cow position: | chr26:19177542-19177370 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 60, 55 |
| Conread position: | 8-279 |
| Cow position: | chr26:2740122-2740405 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 15, 150 |
| Conread position: | 8-288 |
| Cow position: | chr26:24239183-24238902 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 216 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 54, 147 |
| Conread position: | 8-294 |
| Cow position: | chr26:3537606-3537312 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 73, 177 |
| Conread position: | 8-294 |
| Cow position: | chr26:6430067-6429776 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 55, 142 |
| Conread position: | 9-294 |
| Cow position: | chr26:17393416-17393705 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 53, 142 |
| Conread position: | 10-294 |
| Cow position: | chr26:11269703-11269419 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 144 |
| Conread position: | 15-294 |
| Cow position: | chr26:3157592-3157305 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 47, 139 |
Show alignments to all cow chromosomes.