Cow genome map


           Conread name:
           Thy1-THY010009G06
        

               Conread position:
               1-290
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               68, 149
               

               Conread position:
               1-294
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               62, 125
               

               Conread position:
               2-147
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               2-174
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               51, 123
               

               Conread position:
               2-244
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               187
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               73, 152
               

               Conread position:
               2-276
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               61, 154
               

               Conread position:
               2-276
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 274
               

               Conread position:
               2-279
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 152
               

               Conread position:
               2-286
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               73, 104
               

               Conread position:
               2-287
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 45
               

               Conread position:
               2-289
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               124, 61
               

               Conread position:
               2-290
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               61, 212
               

               Conread position:
               2-290
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               190
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               79, 107
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               75, 122
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               217
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               69, 117
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               61, 152
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               73, 12
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               219
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               73, 152
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               73, 148
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               212
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               18, 62
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               60, 152
               

               Conread position:
               2-310
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               73, 140
               

               Conread position:
               3-157
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               9, 61
               

               Conread position:
               3-227
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               59, 115
               

               Conread position:
               3-252
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-252
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-288
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               60, 151
               

               Conread position:
               3-290
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               68, 107
               

               Conread position:
               3-290
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               60, 151
               

               Conread position:
               3-290
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               60, 154
               

               Conread position:
               3-290
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-290
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               79, 160
               

               Conread position:
               3-290
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               12, 99
               

               Conread position:
               3-290
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               60, 143
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               213
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               60, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 144
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               210
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               58, 182
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               59, 107
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               60, 182
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               209
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               59, 154
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               59, 198
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               68, 150
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               68, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               57, 131
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               60, 154
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               60, 149
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               60, 152
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               206
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               72, 146
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               60, 149
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               3-300
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               68, 292
               

               Conread position:
               3-310
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               58, 152
               

               Conread position:
               6-166
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               120, 138
               

               Conread position:
               6-232
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               65, 153
               

               Conread position:
               7-293
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 148
               

               Conread position:
               8-180
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               60, 55
               

               Conread position:
               8-279
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               15, 150
               

               Conread position:
               8-288
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               216
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               54, 147
               

               Conread position:
               8-294
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               73, 177
               

               Conread position:
               8-294
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               55, 142
               

               Conread position:
               9-294
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               53, 142
               

               Conread position:
               10-294
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 144
               

               Conread position:
               15-294
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               47, 139
               
Show alignments to all cow chromosomes.