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Cow genome map

           
Conread name:
           
Thy1-THY010009G06
        

               
Conread position:
               
1-258
               

               
Cow position:
               
chr5:29122746-29122992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
108, 62
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr5:3695618-3695354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
158, 74
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr5:28223721-28223440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
80, 122
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr5:27691262-27690974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
75, 65
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr5:49565846-49565559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
67, 62
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr5:50201720-50202011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
78, 94
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr5:48225297-48225597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
53, 183
               

               
Conread position:
               
2-124
               

               
Cow position:
               
chr5:25496128-25496258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
2-152
               

               
Cow position:
               
chr5:7042522-7042364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
2-158
               

               
Cow position:
               
chr5:1780301-1780461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
73, 25
               

               
Conread position:
               
2-163
               

               
Cow position:
               
chr5:39816023-39816188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
72, 122
               

               
Conread position:
               
2-168
               

               
Cow position:
               
chr5:52041208-52041377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
73, 147
               

               
Conread position:
               
2-170
               

               
Cow position:
               
chr5:72007612-72007788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
73, 152
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr5:50599338-50599153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
73, 51
               

               
Conread position:
               
2-184
               

               
Cow position:
               
chr5:39448266-39448454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
62, 151
               

               
Conread position:
               
2-227
               

               
Cow position:
               
chr5:60446713-60446481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
69, 150
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr5:45941717-45941940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
66, 61
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr5:7175579-7175333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
61, 150
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr5:1105597-1105846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
61, 116
               

               
Conread position:
               
2-259
               

               
Cow position:
               
chr5:15723034-15723300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 153
               

               
Conread position:
               
2-268
               

               
Cow position:
               
chr5:6044279-6044008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
60, 148
               

               
Conread position:
               
2-273
               

               
Cow position:
               
chr5:4165908-4165633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 150
               

               
Conread position:
               
2-275
               

               
Cow position:
               
chr5:34527847-34527577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
61, 130
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr5:17645801-17646086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr5:35207523-35207241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
61, 152
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr5:52829505-52829785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
61, 161
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr5:14551320-14551607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
61, 161
               

               
Conread position:
               
2-284
               

               
Cow position:
               
chr5:42744071-42743784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 149
               

               
Conread position:
               
2-285
               

               
Cow position:
               
chr5:6032255-6031979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
61, 107
               

               
Conread position:
               
2-288
               

               
Cow position:
               
chr5:26466905-26466626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 113
               

               
Conread position:
               
2-290
               

               
Cow position:
               
chr5:27178916-27178634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
60, 166
               

               
Conread position:
               
2-290
               

               
Cow position:
               
chr5:34300162-34299877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 119
               

               
Conread position:
               
2-290
               

               
Cow position:
               
chr5:43991563-43991267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 150
               

               
Conread position:
               
2-290
               

               
Cow position:
               
chr5:47855108-47854820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 152
               

               
Conread position:
               
2-290
               

               
Cow position:
               
chr5:51502165-51501869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 199
               

               
Conread position:
               
2-290
               

               
Cow position:
               
chr5:64844987-64845279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
61, 150
               

               
Conread position:
               
2-290
               

               
Cow position:
               
chr5:69519881-69519582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
73, 243
               

               
Conread position:
               
2-292
               

               
Cow position:
               
chr5:25920506-25920791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
66, 61
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr5:34192201-34191906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
60, 127
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr5:72046383-72046681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 151
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr5:4630041-4629749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
61, 124
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr5:4963105-4963399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
69, 150
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr5:5682228-5682530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 154
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr5:5937587-5937288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
61, 150
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr5:23845271-23845560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
69, 116
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr5:26134987-26135286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
62, 155
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr5:29459173-29458897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr5:30294584-30294290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 145
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr5:34669808-34670107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 150
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr5:42676524-42676242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
61, 132
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr5:45705292-45705002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr5:47871827-47872125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 175
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr5:48574546-48574838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
73, 135
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr5:51684336-51684640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
61, 114
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr5:53834933-53834635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 152
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr5:58461412-58461716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
73, 116
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr5:68593701-68593412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
58, 144
               

               
Conread position:
               
2-295
               

               
Cow position:
               
chr5:54721933-54721635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 94
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr5:18883329-18883628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
66, 61
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr5:40928745-40929040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
46, 150
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr5:32964779-32965088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 152
               

               
Conread position:
               
2-300
               

               
Cow position:
               
chr5:8996730-8997030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
61, 172
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr5:31634717-31634410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
58, 171
               

               
Conread position:
               
2-304
               

               
Cow position:
               
chr5:7140819-7141130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
2-310
               

               
Cow position:
               
chr5:32088498-32088807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
61, 169
               

               
Conread position:
               
2-311
               

               
Cow position:
               
chr5:24221276-24220962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
61, 152
               

               
Conread position:
               
2-318
               

               
Cow position:
               
chr5:8529926-8529613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
73, 50
               

               
Conread position:
               
3-155
               

               
Cow position:
               
chr5:14630650-14630811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
3-221
               

               
Cow position:
               
chr5:27549234-27549453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
80, 144
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr5:28013137-28012910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 151
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr5:43437662-43437894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
59, 149
               

               
Conread position:
               
3-252
               

               
Cow position:
               
chr5:66338131-66337887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
61, 151
               

               
Conread position:
               
3-260
               

               
Cow position:
               
chr5:24643594-24643855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
50, 147
               

               
Conread position:
               
3-268
               

               
Cow position:
               
chr5:16085530-16085802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
60, 150
               

               
Conread position:
               
3-268
               

               
Cow position:
               
chr5:44275875-44275608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
60, 151
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr5:6694814-6694531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
60, 151
               

               
Conread position:
               
3-287
               

               
Cow position:
               
chr5:5106503-5106212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
72, 150
               

               
Conread position:
               
3-287
               

               
Cow position:
               
chr5:41586554-41586262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
59, 151
               

               
Conread position:
               
3-288
               

               
Cow position:
               
chr5:46625997-46626289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
60, 143
               

               
Conread position:
               
3-288
               

               
Cow position:
               
chr5:47471676-47471380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
60, 239
               

               
Conread position:
               
3-289
               

               
Cow position:
               
chr5:24087770-24088066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
60, 149
               

               
Conread position:
               
3-289
               

               
Cow position:
               
chr5:46707917-46707626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
60, 160
               

               
Conread position:
               
3-290
               

               
Cow position:
               
chr5:10772550-10772841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 148
               

               
Conread position:
               
3-290
               

               
Cow position:
               
chr5:10853554-10853847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
59, 149
               

               
Conread position:
               
3-290
               

               
Cow position:
               
chr5:18667587-18667292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
59, 151
               

               
Conread position:
               
3-290
               

               
Cow position:
               
chr5:48805189-48805466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
123, 143
               

               
Conread position:
               
3-290
               

               
Cow position:
               
chr5:54785828-54786123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
60, 149
               

               
Conread position:
               
3-292
               

               
Cow position:
               
chr5:8178414-8178122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
59, 149
               

               
Conread position:
               
3-293
               

               
Cow position:
               
chr5:45179567-45179864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
59, 143
               

               
Conread position:
               
3-293
               

               
Cow position:
               
chr5:48026548-48026251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
59, 151
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:1059287-1059586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
59, 182
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:1338641-1338940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
60, 149
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:2917741-2917445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
60, 181
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:3544576-3544289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
123, 60
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:3789503-3789209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
60, 113
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:4015592-4015891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
59, 151
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:4434224-4434523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
59, 184
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:6151552-6151851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
60, 149
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:6585174-6585472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
60, 143
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:7396523-7396229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
60, 114
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:10922125-10921826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
60, 149
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:12212813-12212514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
59, 151
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:12337554-12337255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
78, 151
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:12921677-12921379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
60, 148
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:14543021-14543320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
60, 151
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:14636299-14636597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
60, 148
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:17027345-17027059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
63, 111
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:17387137-17387436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
59, 149
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:18118695-18118994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
59, 151
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:18404778-18405073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
60, 147
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:18901599-18901315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
58, 127
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:19978634-19978933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
60, 149
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:21189498-21189202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
60, 146
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:21828100-21827807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
58, 25
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:24101930-24101631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
60, 182
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:24159215-24158916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
59, 151
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:26053011-26052712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
59, 151
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:29634709-29634410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
60, 154
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:29742281-29742576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
60, 149
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:31709580-31709281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
59, 151
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:32755171-32755463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
60, 107
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:34683082-34683379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
60, 110
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:34709049-34708750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
60, 149
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:36369712-36370011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
72, 151
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:36906782-36907081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
59, 151
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:37380366-37380068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
59, 151
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:42283443-42283151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
71, 144
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:44617425-44617126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
59, 151
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:46676893-46676594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
59, 149
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:47343153-47342855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
60, 149
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:47560280-47560580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
67, 152
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:49117071-49117370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
60, 149
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:49221219-49221512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
72, 143
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:52822928-52823226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
59, 150
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:53075590-53075889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
59, 151
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:54136358-54136657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
59, 151
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:54337182-54336886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
60, 151
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:54951842-54952141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
60, 151
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:55631344-55631045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
60, 149
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:58199289-58198991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
60, 150
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:58770592-58770889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
60, 149
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:59146657-59146358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
59, 182
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:64778721-64779021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
60, 183
               

               
Conread position:
               
3-299
               

               
Cow position:
               
chr5:35446350-35446640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 60
               

               
Conread position:
               
3-301
               

               
Cow position:
               
chr5:73485606-73485925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
60, 182
               

               
Conread position:
               
6-288
               

               
Cow position:
               
chr5:41411162-41411451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
8-155
               

               
Cow position:
               
chr5:37384260-37384416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
8-222
               

               
Cow position:
               
chr5:7498710-7498932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
54, 144
               

               
Conread position:
               
8-252
               

               
Cow position:
               
chr5:25912993-25912743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
55, 145
               

               
Conread position:
               
8-286
               

               
Cow position:
               
chr5:46671878-46671599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
67, 142
               

               
Conread position:
               
8-287
               

               
Cow position:
               
chr5:33536886-33536605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 44
               

               
Conread position:
               
8-292
               

               
Cow position:
               
chr5:54088988-54088713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
53, 146
               

               
Conread position:
               
8-293
               

               
Cow position:
               
chr5:28947136-28947422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
60, 55
               

               
Conread position:
               
8-294
               

               
Cow position:
               
chr5:6571976-6572256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
49, 98
               

               
Conread position:
               
8-294
               

               
Cow position:
               
chr5:11631710-11632004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
54, 146
               

               
Conread position:
               
8-294
               

               
Cow position:
               
chr5:19969767-19970051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 127
               

               
Conread position:
               
8-294
               

               
Cow position:
               
chr5:24632764-24633058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
54, 146
               

               
Conread position:
               
8-294
               

               
Cow position:
               
chr5:30582601-30582307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
55, 144
               

               
Conread position:
               
8-294
               

               
Cow position:
               
chr5:39936374-39936067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
8-294
               

               
Cow position:
               
chr5:46735002-46735295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
54, 144
               

               
Conread position:
               
9-155
               

               
Cow position:
               
chr5:39749168-39749323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
9-283
               

               
Cow position:
               
chr5:44709098-44709374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
54, 143
               

               
Conread position:
               
9-288
               

               
Cow position:
               
chr5:10262002-10262288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
54, 179
               

               
Conread position:
               
9-294
               

               
Cow position:
               
chr5:34559419-34559118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
54, 142
               

               
Conread position:
               
10-294
               

               
Cow position:
               
chr5:50899906-50899615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
58, 52
               

               
Conread position:
               
11-226
               

               
Cow position:
               
chr5:15362319-15362093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
12, 138
               

               
Conread position:
               
13-290
               

               
Cow position:
               
chr5:71738381-71738099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 110
               

               
Conread position:
               
15-287
               

               
Cow position:
               
chr5:9091158-9091434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
43, 138
               

               
Conread position:
               
33-294
               

               
Cow position:
               
chr5:29769310-29769040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
31, 119
               

               
Conread position:
               
551-770
               

               
Cow position:
               
chr5:29256219-29256434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
153, 61
               
Show alignments to all cow chromosomes.