Cow genome map


           Conread name:
           Thy1-THY010011B06
        

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               166
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               76, 178
               

               Conread position:
               1-214
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               77, 36
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               165
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               76, 65
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               74, 95
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               76, 38
               

               Conread position:
               1-218
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               76, 33
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               142, 74
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               57, 69
               

               Conread position:
               2-215
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               167
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               2-215
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               75, 165
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 34
               

               Conread position:
               6-215
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               168
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               137, 68
               

               Conread position:
               6-221
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               71, 30
               

               Conread position:
               7-212
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               65, 59
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               136, 67
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               70, 197
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               166
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               136, 68
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               168
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               70, 172
               

               Conread position:
               7-220
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               169
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               70, 30
               

               Conread position:
               8-210
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               47, 25
               

               Conread position:
               9-215
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               68, 125
               

               Conread position:
               12-215
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               19-211
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               59, 90
               

               Conread position:
               22-214
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               55, 5
               

               Conread position:
               27-215
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               50, 80
               

               Conread position:
               27-215
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               27-215
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               50, 74
               

               Conread position:
               27-215
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               27-215
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               50, 31
               

               Conread position:
               27-215
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               50, 31
               

               Conread position:
               27-215
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               50, 102
               

               Conread position:
               32-228
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               45, 187
               

               Conread position:
               41-215
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               36, 132
               

               Conread position:
               43-215
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               61-208
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               16, 22
               

               Conread position:
               61-214
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               19, 55
               

               Conread position:
               208-531
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 11
               

               Conread position:
               219-532
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               238
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               14, 117
               

               Conread position:
               220-417
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               17, 50
               

               Conread position:
               220-459
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 184
               

               Conread position:
               220-472
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               224-407
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               21, 69
               

               Conread position:
               227-452
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               24, 71
               

               Conread position:
               229-404
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               19, 41
               

               Conread position:
               230-404
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               18, 40
               

               Conread position:
               230-532
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 226
               

               Conread position:
               231-374
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               17, 38
               

               Conread position:
               232-404
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               17, 38
               

               Conread position:
               232-532
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               230
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               16, 179
               

               Conread position:
               235-475
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               16, 36
               

               Conread position:
               240-404
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               10, 30
               

               Conread position:
               252-451
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               166
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 146
               

               Conread position:
               315-531
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               39, 87
               
Show alignments to all cow chromosomes.