Cow genome map


           Conread name:
           Thy1-THY010011B06
        

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               166
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               142, 72
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               43, 76
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               169
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               76, 65
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               174
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               76, 65
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               43, 56
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               169
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               76, 30
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               167
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               76, 64
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               174
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               76, 51
               

               Conread position:
               1-231
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               80, 36
               

               Conread position:
               5-215
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               170
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               47, 21
               

               Conread position:
               7-208
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               70, 114
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               163
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               70, 138
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               170
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               13, 92
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               150, 67
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               7-218
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               37, 59
               

               Conread position:
               7-220
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               11-215
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               21-215
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               56, 80
               

               Conread position:
               27-215
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               52, 39
               

               Conread position:
               27-215
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               27-215
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               50, 12
               

               Conread position:
               33-198
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               56-215
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               21, 44
               

               Conread position:
               68-209
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               75-215
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               76-234
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               67, 142
               

               Conread position:
               170-532
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 85
               

               Conread position:
               216-453
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               15, 68
               

               Conread position:
               230-403
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               20, 28
               

               Conread position:
               232-574
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 175
               

               Conread position:
               236-354
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               239-420
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               11, 134
               

               Conread position:
               240-407
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               8, 26
               

               Conread position:
               250-475
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               178
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               34, 134
               

               Conread position:
               282-541
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 27
               
Show alignments to all cow chromosomes.