Cow genome map
| Conread name: | Thy1-THY010011B06 |
| Conread position: | 1-209 |
| Cow position: | chr12:21901870-21902080 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 163 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 1-215 |
| Cow position: | chr12:2729-2946 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 1-215 |
| Cow position: | chr12:22332550-22332771 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 67, 95 |
| Conread position: | 1-215 |
| Cow position: | chr12:45261548-45261770 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 174 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 76, 32 |
| Conread position: | 1-218 |
| Cow position: | chr12:347755-347978 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 18, 41 |
| Conread position: | 7-214 |
| Cow position: | chr12:8982480-8982278 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 148, 24 |
| Conread position: | 7-215 |
| Cow position: | chr12:8311122-8311328 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 136, 66 |
| Conread position: | 7-215 |
| Cow position: | chr12:32653481-32653691 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 70, 45 |
| Conread position: | 7-215 |
| Cow position: | chr12:37558491-37558703 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 19-215 |
| Cow position: | chr12:21941712-21941912 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 19-228 |
| Cow position: | chr12:2282495-2282705 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 58, 22 |
| Conread position: | 30-215 |
| Cow position: | chr12:26947033-26946845 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 33-215 |
| Cow position: | chr12:48405233-48405419 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 51, 42 |
| Conread position: | 49-221 |
| Cow position: | chr12:14662655-14662479 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 220-399 |
| Cow position: | chr12:12308308-12308125 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 29, 50 |
| Conread position: | 220-468 |
| Cow position: | chr12:15737481-15737241 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 28, 50 |
| Conread position: | 221-403 |
| Cow position: | chr12:37944699-37944514 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 29, 148 |
| Conread position: | 228-530 |
| Cow position: | chr12:29247505-29247207 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 225 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 21, 167 |
| Conread position: | 236-427 |
| Cow position: | chr12:16915525-16915718 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 240-349 |
| Cow position: | chr12:8260159-8260049 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 9, 102 |
| Conread position: | 240-401 |
| Cow position: | chr12:37496479-37496642 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 12, 37 |
| Conread position: | 247-371 |
| Cow position: | chr12:38796281-38796408 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 247-402 |
| Cow position: | chr12:9802465-9802306 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 100, 0 |
Show alignments to all cow chromosomes.