Cow genome map


           Conread name:
           Thy1-THY010011B06
        

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               142, 71
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               167
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               63, 83
               

               Conread position:
               1-217
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               168
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               76, 25
               

               Conread position:
               1-228
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               1-233
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               180
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               7-214
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               165
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               70, 173
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               164
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               72, 33
               

               Conread position:
               8-215
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               161
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               19-215
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               58, 34
               

               Conread position:
               26-215
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               27-215
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               27-215
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               42-214
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               214-530
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               230
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               38, 85
               

               Conread position:
               214-532
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 59
               

               Conread position:
               216-450
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               183
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               32, 173
               

               Conread position:
               219-395
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               29, 51
               

               Conread position:
               221-361
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               28, 49
               

               Conread position:
               224-384
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               103, 7
               

               Conread position:
               224-532
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               7, 27
               

               Conread position:
               228-447
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               112, 22
               

               Conread position:
               228-448
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 82
               

               Conread position:
               228-532
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 230
               

               Conread position:
               231-410
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               17, 52
               

               Conread position:
               232-404
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               16, 38
               

               Conread position:
               235-532
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               13, 181
               

               Conread position:
               235-576
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               244
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               13, 40
               

               Conread position:
               249-532
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               7, 18
               

               Conread position:
               250-532
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               99, 5
               

               Conread position:
               307-530
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               24, 147
               
Show alignments to all cow chromosomes.