Cow genome map
| Conread name: | Thy1-THY010011B06 |
| Conread position: | 1-215 |
| Cow position: | chr13:3276867-3277080 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 142, 71 |
| Conread position: | 1-215 |
| Cow position: | chr13:56730574-56730360 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 167 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 63, 83 |
| Conread position: | 1-217 |
| Cow position: | chr13:34142948-34142731 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 168 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 76, 25 |
| Conread position: | 1-228 |
| Cow position: | chr13:54284290-54284508 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1-233 |
| Cow position: | chr13:31832309-31832545 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 7-214 |
| Cow position: | chr13:34325960-34325750 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 165 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 70, 173 |
| Conread position: | 7-215 |
| Cow position: | chr13:4940802-4941014 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 164 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 7-215 |
| Cow position: | chr13:22186017-22185809 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 72, 33 |
| Conread position: | 8-215 |
| Cow position: | chr13:62327868-62327658 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 161 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 19-215 |
| Cow position: | chr13:32986323-32986130 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 58, 34 |
| Conread position: | 26-215 |
| Cow position: | chr13:6668389-6668197 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 27-215 |
| Cow position: | chr13:13324484-13324675 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 27-215 |
| Cow position: | chr13:30244998-30244807 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 42-214 |
| Cow position: | chr13:4178901-4178726 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 214-530 |
| Cow position: | chr13:10042230-10042539 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 230 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 38, 85 |
| Conread position: | 214-532 |
| Cow position: | chr13:33471998-33471697 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 59 |
| Conread position: | 216-450 |
| Cow position: | chr13:17774608-17774381 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 183 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 32, 173 |
| Conread position: | 219-395 |
| Cow position: | chr13:59065603-59065424 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 29, 51 |
| Conread position: | 221-361 |
| Cow position: | chr13:17026804-17026663 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 28, 49 |
| Conread position: | 224-384 |
| Cow position: | chr13:25355981-25356140 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 103, 7 |
| Conread position: | 224-532 |
| Cow position: | chr13:34743675-34743980 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 7, 27 |
| Conread position: | 228-447 |
| Cow position: | chr13:5343643-5343427 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 112, 22 |
| Conread position: | 228-448 |
| Cow position: | chr13:5004282-5004061 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 82 |
| Conread position: | 228-532 |
| Cow position: | chr13:30154481-30154777 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 230 |
| Conread position: | 231-410 |
| Cow position: | chr13:52317761-52317580 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 17, 52 |
| Conread position: | 232-404 |
| Cow position: | chr13:2360898-2360724 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 16, 38 |
| Conread position: | 235-532 |
| Cow position: | chr13:24012494-24012781 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 13, 181 |
| Conread position: | 235-576 |
| Cow position: | chr13:33029509-33029179 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 244 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 13, 40 |
| Conread position: | 249-532 |
| Cow position: | chr13:8816141-8815871 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 7, 18 |
| Conread position: | 250-532 |
| Cow position: | chr13:28067169-28066897 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 211 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 99, 5 |
| Conread position: | 307-530 |
| Cow position: | chr13:22472060-22472275 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 24, 147 |
Show alignments to all cow chromosomes.