Cow genome map
| Conread name: | Thy1-THY010011B06 |
| Conread position: | 1-198 |
| Cow position: | chr14:13660403-13660203 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 157 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 1-210 |
| Cow position: | chr14:44130504-44130712 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 142, 71 |
| Conread position: | 1-215 |
| Cow position: | chr14:7830954-7830738 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 168 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 76, 99 |
| Conread position: | 1-215 |
| Cow position: | chr14:22018984-22019195 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 76, 34 |
| Conread position: | 1-215 |
| Cow position: | chr14:37414303-37414084 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1-215 |
| Cow position: | chr14:42151908-42152125 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 1-215 |
| Cow position: | chr14:43034298-43034085 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 78, 24 |
| Conread position: | 1-215 |
| Cow position: | chr14:44422141-44422356 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 170 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 77, 28 |
| Conread position: | 1-215 |
| Cow position: | chr14:50110157-50110368 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 68, 60 |
| Conread position: | 1-220 |
| Cow position: | chr14:45850809-45851029 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 77, 123 |
| Conread position: | 3-215 |
| Cow position: | chr14:27992720-27992506 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 74, 31 |
| Conread position: | 6-215 |
| Cow position: | chr14:45767597-45767804 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 137, 69 |
| Conread position: | 7-206 |
| Cow position: | chr14:16273704-16273502 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 19-206 |
| Cow position: | chr14:45080124-45080313 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 58, 154 |
| Conread position: | 19-214 |
| Cow position: | chr14:46464674-46464874 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 19-215 |
| Cow position: | chr14:41755455-41755646 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 124, 17 |
| Conread position: | 19-215 |
| Cow position: | chr14:45712381-45712184 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 124, 58 |
| Conread position: | 21-215 |
| Cow position: | chr14:9045171-9045368 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 21-215 |
| Cow position: | chr14:30596775-30596581 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 122, 18 |
| Conread position: | 21-215 |
| Cow position: | chr14:45917021-45917220 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 23-215 |
| Cow position: | chr14:19619827-19620022 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 14, 54 |
| Conread position: | 27-215 |
| Cow position: | chr14:17491845-17491654 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 28-229 |
| Cow position: | chr14:44551497-44551699 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 115, 47 |
| Conread position: | 57-222 |
| Cow position: | chr14:42198233-42198397 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 20, 80 |
| Conread position: | 84-215 |
| Cow position: | chr14:45771105-45770975 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 59, 24 |
| Conread position: | 211-472 |
| Cow position: | chr14:26055127-26054848 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 212 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 37, 273 |
| Conread position: | 218-532 |
| Cow position: | chr14:37626427-37626738 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 13, 244 |
| Conread position: | 220-403 |
| Cow position: | chr14:39901913-39901727 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 28, 47 |
| Conread position: | 220-446 |
| Cow position: | chr14:5330325-5330556 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 230-394 |
| Cow position: | chr14:4050536-4050371 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 18, 40 |
| Conread position: | 232-395 |
| Cow position: | chr14:26037969-26037804 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 15, 38 |
| Conread position: | 232-411 |
| Cow position: | chr14:11526171-11525990 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 16, 39 |
| Conread position: | 238-378 |
| Cow position: | chr14:5065902-5066042 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 11, 32 |
| Conread position: | 240-531 |
| Cow position: | chr14:49056881-49056601 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 8, 30 |
| Conread position: | 250-404 |
| Cow position: | chr14:27881303-27881454 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 102, 32 |
| Conread position: | 262-532 |
| Cow position: | chr14:20713636-20713897 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 7, 194 |
| Conread position: | 331-532 |
| Cow position: | chr14:18321484-18321678 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 20, 129 |
Show alignments to all cow chromosomes.