Cow genome map
| Conread name: | Thy1-THY010011B06 |
| Conread position: | 1-205 |
| Cow position: | chr15:4795270-4795472 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 76, 54 |
| Conread position: | 1-212 |
| Cow position: | chr15:4671009-4671229 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 1-215 |
| Cow position: | chr15:4733448-4733662 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 170 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 76, 25 |
| Conread position: | 1-215 |
| Cow position: | chr15:7522901-7522689 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 142, 73 |
| Conread position: | 1-215 |
| Cow position: | chr15:16542255-16542473 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 1-215 |
| Cow position: | chr15:21961094-21961311 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 1-215 |
| Cow position: | chr15:24793637-24793851 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 17 |
| Conread position: | 1-215 |
| Cow position: | chr15:35735042-35735259 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 1-220 |
| Cow position: | chr15:3037923-3037705 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 142, 73 |
| Conread position: | 1-221 |
| Cow position: | chr15:25789381-25789158 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 123 |
| Conread position: | 1-228 |
| Cow position: | chr15:51800321-51800540 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 76, 34 |
| Conread position: | 2-215 |
| Cow position: | chr15:23157240-23157027 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 169 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 75, 98 |
| Conread position: | 6-220 |
| Cow position: | chr15:36648504-36648715 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 137, 66 |
| Conread position: | 7-215 |
| Cow position: | chr15:3010258-3010047 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 7-215 |
| Cow position: | chr15:8099081-8099290 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 70, 34 |
| Conread position: | 7-215 |
| Cow position: | chr15:12421573-12421362 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 7-215 |
| Cow position: | chr15:24715823-24716028 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 61, 29 |
| Conread position: | 7-215 |
| Cow position: | chr15:36642218-36642418 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 136, 67 |
| Conread position: | 7-215 |
| Cow position: | chr15:50124346-50124135 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 8-215 |
| Cow position: | chr15:1763686-1763894 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 69, 153 |
| Conread position: | 19-215 |
| Cow position: | chr15:17292044-17292242 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 58, 74 |
| Conread position: | 19-215 |
| Cow position: | chr15:35747903-35748097 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 159 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 124, 54 |
| Conread position: | 19-215 |
| Cow position: | chr15:37392106-37392300 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 58, 110 |
| Conread position: | 19-234 |
| Cow position: | chr15:35648615-35648415 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 124, 53 |
| Conread position: | 20-205 |
| Cow position: | chr15:6370170-6369985 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 57, 35 |
| Conread position: | 20-229 |
| Cow position: | chr15:38979525-38979738 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 21-215 |
| Cow position: | chr15:1781861-1782058 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 21-215 |
| Cow position: | chr15:2011690-2011886 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 24-220 |
| Cow position: | chr15:51671958-51672156 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 27-215 |
| Cow position: | chr15:17787551-17787363 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 72, 47 |
| Conread position: | 27-215 |
| Cow position: | chr15:40105078-40105268 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 52, 10 |
| Conread position: | 27-234 |
| Cow position: | chr15:1236933-1237140 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 62, 103 |
| Conread position: | 40-215 |
| Cow position: | chr15:6593317-6593141 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 37, 138 |
| Conread position: | 41-215 |
| Cow position: | chr15:36627045-36626867 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 58-215 |
| Cow position: | chr15:4961273-4961435 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 77-215 |
| Cow position: | chr15:10787465-10787325 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 81-215 |
| Cow position: | chr15:7894562-7894426 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 219-440 |
| Cow position: | chr15:50339254-50339029 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 219-448 |
| Cow position: | chr15:37720347-37720574 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 174 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 30, 113 |
| Conread position: | 220-471 |
| Cow position: | chr15:10500116-10499865 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 50 |
| Conread position: | 220-531 |
| Cow position: | chr15:4547408-4547707 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 226 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 28, 53 |
| Conread position: | 225-531 |
| Cow position: | chr15:29930503-29930814 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 23, 265 |
| Conread position: | 228-530 |
| Cow position: | chr15:19871295-19871005 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 56 |
| Conread position: | 231-402 |
| Cow position: | chr15:43356433-43356262 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 19, 39 |
| Conread position: | 247-450 |
| Cow position: | chr15:6505402-6505610 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 164 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 247-530 |
| Cow position: | chr15:10033014-10033289 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 22 |
Show alignments to all cow chromosomes.