Cow genome map
| Conread name: | Thy1-THY010011B06 |
| Conread position: | 1-198 |
| Cow position: | chr16:33611840-33611642 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 76, 114 |
| Conread position: | 1-215 |
| Cow position: | chr16:10808396-10808606 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 76, 34 |
| Conread position: | 1-215 |
| Cow position: | chr16:40887018-40886804 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 74, 128 |
| Conread position: | 1-220 |
| Cow position: | chr16:20255070-20254850 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 76, 34 |
| Conread position: | 1-220 |
| Cow position: | chr16:42740179-42739962 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 76, 25 |
| Conread position: | 1-222 |
| Cow position: | chr16:9929784-9930002 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 77, 39 |
| Conread position: | 3-211 |
| Cow position: | chr16:19713643-19713434 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 164 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 74, 125 |
| Conread position: | 3-215 |
| Cow position: | chr16:11052403-11052621 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 168 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 7-215 |
| Cow position: | chr16:836275-836485 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 70, 24 |
| Conread position: | 7-215 |
| Cow position: | chr16:28171114-28170907 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 136, 71 |
| Conread position: | 7-215 |
| Cow position: | chr16:51685687-51685893 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 70, 32 |
| Conread position: | 7-220 |
| Cow position: | chr16:25084867-25085082 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 34 |
| Conread position: | 9-215 |
| Cow position: | chr16:49257336-49257127 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 124 |
| Conread position: | 10-215 |
| Cow position: | chr16:47562935-47563146 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 67, 21 |
| Conread position: | 19-210 |
| Cow position: | chr16:39820889-39821083 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 22-213 |
| Cow position: | chr16:42051120-42050933 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 55, 11 |
| Conread position: | 23-215 |
| Cow position: | chr16:36362099-36361907 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 120, 50 |
| Conread position: | 27-215 |
| Cow position: | chr16:5661119-5661306 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 7, 15 |
| Conread position: | 40-215 |
| Cow position: | chr16:7905903-7906075 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 103, 15 |
| Conread position: | 207-532 |
| Cow position: | chr16:4860821-4860519 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 26, 109 |
| Conread position: | 218-521 |
| Cow position: | chr16:51577585-51577894 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 218-532 |
| Cow position: | chr16:8440192-8439886 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 93 |
| Conread position: | 219-417 |
| Cow position: | chr16:24024132-24023937 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 29, 51 |
| Conread position: | 219-452 |
| Cow position: | chr16:41885835-41886071 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 61 |
| Conread position: | 219-526 |
| Cow position: | chr16:15226911-15227194 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 232 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 30, 47 |
| Conread position: | 222-449 |
| Cow position: | chr16:4407689-4407914 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 11, 89 |
| Conread position: | 225-475 |
| Cow position: | chr16:9479612-9479848 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 26, 113 |
| Conread position: | 230-377 |
| Cow position: | chr16:10693596-10693745 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 40 |
| Conread position: | 232-411 |
| Cow position: | chr16:40523389-40523207 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 16, 48 |
| Conread position: | 235-404 |
| Cow position: | chr16:19827369-19827545 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 14, 45 |
| Conread position: | 240-532 |
| Cow position: | chr16:46407751-46407468 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 8, 38 |
| Conread position: | 240-576 |
| Cow position: | chr16:1970770-1971102 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 11, 38 |
| Conread position: | 281-472 |
| Cow position: | chr16:31533392-31533204 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 64, 26 |
| Conread position: | 300-472 |
| Cow position: | chr16:54481348-54481170 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 44, 96 |
Show alignments to all cow chromosomes.