Cow genome map
| Conread name: | Thy1-THY010011B06 |
| Conread position: | 1-197 |
| Cow position: | chr18:1521154-1521352 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 76, 25 |
| Conread position: | 1-209 |
| Cow position: | chr18:114418-114627 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 142, 46 |
| Conread position: | 1-211 |
| Cow position: | chr18:32293793-32294005 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 166 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 76, 121 |
| Conread position: | 1-212 |
| Cow position: | chr18:23944350-23944136 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 166 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 1-214 |
| Cow position: | chr18:16534004-16534219 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 76, 25 |
| Conread position: | 1-214 |
| Cow position: | chr18:43201082-43201295 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 66, 34 |
| Conread position: | 1-215 |
| Cow position: | chr18:2019661-2019443 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 170 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1-215 |
| Cow position: | chr18:6869232-6869017 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 76, 34 |
| Conread position: | 1-215 |
| Cow position: | chr18:33358892-33359107 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 171 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 76, 134 |
| Conread position: | 1-215 |
| Cow position: | chr18:37599506-37599300 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 7, 40 |
| Conread position: | 1-215 |
| Cow position: | chr18:43146901-43146684 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 1-215 |
| Cow position: | chr18:47719559-47719342 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 76, 68 |
| Conread position: | 1-215 |
| Cow position: | chr18:48221902-48222121 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 171 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1-215 |
| Cow position: | chr18:53785862-53786081 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 76, 25 |
| Conread position: | 1-220 |
| Cow position: | chr18:51310605-51310832 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 176 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 74, 40 |
| Conread position: | 7-215 |
| Cow position: | chr18:19352416-19352627 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 7-215 |
| Cow position: | chr18:33268860-33269067 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 136, 65 |
| Conread position: | 7-215 |
| Cow position: | chr18:35335510-35335721 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 7-215 |
| Cow position: | chr18:47742049-47742260 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 7-215 |
| Cow position: | chr18:51480869-51481081 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 19-215 |
| Cow position: | chr18:14416019-14416218 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 163 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 19-215 |
| Cow position: | chr18:54171802-54171618 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 124, 22 |
| Conread position: | 27-215 |
| Cow position: | chr18:51341737-51341928 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 42-215 |
| Cow position: | chr18:16078783-16078959 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 212-536 |
| Cow position: | chr18:22058419-22058737 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 144 |
| Conread position: | 220-405 |
| Cow position: | chr18:11180501-11180306 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 220-427 |
| Cow position: | chr18:39132943-39133152 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 28, 50 |
| Conread position: | 220-452 |
| Cow position: | chr18:1169260-1169494 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 13, 91 |
| Conread position: | 220-532 |
| Cow position: | chr18:29222744-29222442 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 66 |
| Conread position: | 226-376 |
| Cow position: | chr18:50053289-50053443 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 44 |
| Conread position: | 227-406 |
| Cow position: | chr18:18425421-18425604 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 21, 43 |
| Conread position: | 228-395 |
| Cow position: | chr18:365853-366024 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 228-450 |
| Cow position: | chr18:10403666-10403891 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 228-531 |
| Cow position: | chr18:30509774-30510074 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 238 |
| Conread position: | 228-535 |
| Cow position: | chr18:11417689-11417393 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 23, 51 |
| Conread position: | 232-532 |
| Cow position: | chr18:24536168-24535890 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 35, 18 |
| Conread position: | 232-532 |
| Cow position: | chr18:55059928-55060209 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 218 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 15, 115 |
| Conread position: | 241-475 |
| Cow position: | chr18:25132432-25132190 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 184 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 244-453 |
| Cow position: | chr18:43654775-43654570 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 163 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 250-381 |
| Cow position: | chr18:11498349-11498217 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 254-532 |
| Cow position: | chr18:9922079-9921807 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 90, 25 |
| Conread position: | 371-475 |
| Cow position: | chr18:3327157-3327052 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
Show alignments to all cow chromosomes.