Cow genome map


           Conread name:
           Thy1-THY010011B06
        

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               164
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               142, 76
               

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               162
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               164
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               76, 32
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               76, 68
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               165
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               142, 32
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               142, 119
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               76, 36
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               43, 74
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               32, 100
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               76, 43
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               142, 43
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               169
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               76, 116
               

               Conread position:
               5-234
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 30
               

               Conread position:
               6-210
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               71, 52
               

               Conread position:
               7-214
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               126, 18
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               136, 59
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               136, 62
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               168
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               70, 32
               

               Conread position:
               19-215
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               19-215
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               158
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               58, 20
               

               Conread position:
               19-221
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               21-214
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               22-215
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               22, 9
               

               Conread position:
               22-215
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               55, 25
               

               Conread position:
               24-215
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               53, 28
               

               Conread position:
               24-215
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               14, 156
               

               Conread position:
               24-215
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               119, 50
               

               Conread position:
               26-215
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               27-215
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               27-234
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               163
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               50, 191
               

               Conread position:
               27-234
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               166
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               17, 194
               

               Conread position:
               33-215
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               33-229
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               43, 14
               

               Conread position:
               37-215
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               61-210
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               61-215
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               61-215
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               82, 26
               

               Conread position:
               78-209
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               65, 32
               

               Conread position:
               201-473
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 34
               

               Conread position:
               212-401
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               37, 177
               

               Conread position:
               215-453
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 63
               

               Conread position:
               217-434
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               172
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               16, 23
               

               Conread position:
               219-394
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               219-532
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 30
               

               Conread position:
               219-532
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               235
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               14, 92
               

               Conread position:
               220-401
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               220-407
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               220-475
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               29, 38
               

               Conread position:
               220-532
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 69
               

               Conread position:
               228-532
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 139
               

               Conread position:
               229-404
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               19, 42
               

               Conread position:
               230-450
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               170
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               232-453
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               17, 175
               

               Conread position:
               243-576
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               234
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               247-400
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               80, 22
               

               Conread position:
               247-532
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               113, 19
               

               Conread position:
               250-475
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               252-408
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               91, 17
               

               Conread position:
               266-452
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               78, 33
               

               Conread position:
               278-452
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               318-548
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               48, 137
               

               Conread position:
               338-532
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               11, 117
               
Show alignments to all cow chromosomes.