Cow genome map
| Conread name: | Thy1-THY010011B06 |
| Conread position: | 1-205 |
| Cow position: | chr22:44475188-44475384 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 142, 69 |
| Conread position: | 1-214 |
| Cow position: | chr22:11030892-11031108 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 1-215 |
| Cow position: | chr22:5672669-5672886 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 1-215 |
| Cow position: | chr22:6503744-6503528 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 166 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 76, 105 |
| Conread position: | 1-215 |
| Cow position: | chr22:8136268-8136052 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 1-215 |
| Cow position: | chr22:13917435-13917652 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 167 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 43, 100 |
| Conread position: | 1-215 |
| Cow position: | chr22:36533807-36533594 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 166 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 142, 73 |
| Conread position: | 1-215 |
| Cow position: | chr22:36736695-36736907 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 168 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 76, 146 |
| Conread position: | 1-220 |
| Cow position: | chr22:46547732-46547510 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 2-210 |
| Cow position: | chr22:46853275-46853487 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 2-215 |
| Cow position: | chr22:36274742-36274959 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 61, 85 |
| Conread position: | 6-215 |
| Cow position: | chr22:1319334-1319546 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 7-214 |
| Cow position: | chr22:8874929-8875137 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 72, 36 |
| Conread position: | 7-214 |
| Cow position: | chr22:39882238-39882028 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 164 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 7-215 |
| Cow position: | chr22:6020600-6020811 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 7-215 |
| Cow position: | chr22:7277463-7277670 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 171 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 21, 30 |
| Conread position: | 7-215 |
| Cow position: | chr22:35672417-35672207 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 7-215 |
| Cow position: | chr22:37131586-37131793 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 70, 34 |
| Conread position: | 7-215 |
| Cow position: | chr22:44489825-44490036 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 8-215 |
| Cow position: | chr22:41419755-41419545 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 165 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 69, 82 |
| Conread position: | 13-221 |
| Cow position: | chr22:46581639-46581432 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 65, 28 |
| Conread position: | 19-215 |
| Cow position: | chr22:537051-537250 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 19-215 |
| Cow position: | chr22:693576-693775 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 27-213 |
| Cow position: | chr22:1321564-1321742 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 18, 132 |
| Conread position: | 27-214 |
| Cow position: | chr22:870906-870718 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 50, 43 |
| Conread position: | 30-215 |
| Cow position: | chr22:13675204-13675022 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 92, 30 |
| Conread position: | 33-215 |
| Cow position: | chr22:1878756-1878942 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 33-215 |
| Cow position: | chr22:16200437-16200623 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 43-228 |
| Cow position: | chr22:117858-117681 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 100, 23 |
| Conread position: | 52-214 |
| Cow position: | chr22:21365424-21365261 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 27, 20 |
| Conread position: | 55-233 |
| Cow position: | chr22:5933010-5932828 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 211-532 |
| Cow position: | chr22:29247996-29247694 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 241 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 20, 85 |
| Conread position: | 213-381 |
| Cow position: | chr22:8471127-8471296 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 36, 57 |
| Conread position: | 220-393 |
| Cow position: | chr22:27706604-27706430 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 28, 50 |
| Conread position: | 220-404 |
| Cow position: | chr22:29846894-29846717 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 9, 48 |
| Conread position: | 220-452 |
| Cow position: | chr22:11650376-11650140 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 220-532 |
| Cow position: | chr22:100059-99742 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 238 |
| Conread position: | 222-475 |
| Cow position: | chr22:29431927-29432177 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 48 |
| Conread position: | 223-509 |
| Cow position: | chr22:34225900-34225621 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 87 |
| Conread position: | 224-452 |
| Cow position: | chr22:20970460-20970679 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 7, 87 |
| Conread position: | 227-463 |
| Cow position: | chr22:13520940-13521177 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 7 |
| Conread position: | 228-532 |
| Cow position: | chr22:29149609-29149902 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 65 |
| Conread position: | 236-532 |
| Cow position: | chr22:25379251-25379537 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 214 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 15, 74 |
Show alignments to all cow chromosomes.