Cow genome map
| Conread name: | Thy1-THY010011B06 |
| Conread position: | 1-215 |
| Cow position: | chr24:36707863-36708081 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 171 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 10, 180 |
| Conread position: | 3-200 |
| Cow position: | chr24:38635775-38635974 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 162 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 75, 41 |
| Conread position: | 5-215 |
| Cow position: | chr24:1447579-1447791 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 52, 25 |
| Conread position: | 7-215 |
| Cow position: | chr24:4415501-4415294 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 164 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 70, 32 |
| Conread position: | 7-215 |
| Cow position: | chr24:6434265-6434475 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 7-215 |
| Cow position: | chr24:14384589-14384380 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 118, 174 |
| Conread position: | 7-215 |
| Cow position: | chr24:22952160-22952371 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 7-215 |
| Cow position: | chr24:33739311-33739102 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 75, 34 |
| Conread position: | 7-215 |
| Cow position: | chr24:36560059-36559852 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 70, 45 |
| Conread position: | 7-217 |
| Cow position: | chr24:8030175-8030388 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 7-217 |
| Cow position: | chr24:22793197-22793409 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 70, 125 |
| Conread position: | 7-220 |
| Cow position: | chr24:9092249-9092042 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 136, 67 |
| Conread position: | 7-228 |
| Cow position: | chr24:37217028-37217247 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 37, 128 |
| Conread position: | 8-215 |
| Cow position: | chr24:35838585-35838381 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 69, 8 |
| Conread position: | 12-215 |
| Cow position: | chr24:12086228-12086433 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 161 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 65, 46 |
| Conread position: | 12-228 |
| Cow position: | chr24:12237083-12237301 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 66, 198 |
| Conread position: | 19-215 |
| Cow position: | chr24:12161915-12162110 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 124, 22 |
| Conread position: | 19-235 |
| Cow position: | chr24:6145396-6145621 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 56, 169 |
| Conread position: | 21-215 |
| Cow position: | chr24:7091557-7091356 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 56, 72 |
| Conread position: | 33-198 |
| Cow position: | chr24:39678459-39678627 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 33-214 |
| Cow position: | chr24:16649271-16649083 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 62-231 |
| Cow position: | chr24:13524184-13524354 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 15, 162 |
| Conread position: | 219-453 |
| Cow position: | chr24:33070984-33070749 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 79 |
| Conread position: | 219-474 |
| Cow position: | chr24:16504896-16505155 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 193 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 32, 51 |
| Conread position: | 220-409 |
| Cow position: | chr24:14886809-14886992 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 12, 60 |
| Conread position: | 224-542 |
| Cow position: | chr24:44381827-44382139 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 11 |
| Conread position: | 240-531 |
| Cow position: | chr24:27477514-27477796 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 9, 26 |
| Conread position: | 247-446 |
| Cow position: | chr24:13915273-13915475 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 68, 22 |
| Conread position: | 248-405 |
| Cow position: | chr24:6228599-6228442 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 81, 21 |
| Conread position: | 249-404 |
| Cow position: | chr24:39256346-39256190 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 79, 20 |
| Conread position: | 317-532 |
| Cow position: | chr24:39887677-39887472 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 44, 139 |
Show alignments to all cow chromosomes.