Cow genome map
| Conread name: | Thy1-THY010011B06 |
| Conread position: | 1-215 |
| Cow position: | chr29:21543422-21543210 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 157, 76 |
| Conread position: | 1-215 |
| Cow position: | chr29:27040821-27040610 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 47, 30 |
| Conread position: | 1-234 |
| Cow position: | chr29:16770071-16770299 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 76, 51 |
| Conread position: | 3-215 |
| Cow position: | chr29:11049225-11049437 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 74, 32 |
| Conread position: | 7-215 |
| Cow position: | chr29:19623299-19623088 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 164 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 70, 91 |
| Conread position: | 7-215 |
| Cow position: | chr29:27980969-27980758 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 7-220 |
| Cow position: | chr29:14585876-14586086 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 70, 104 |
| Conread position: | 8-208 |
| Cow position: | chr29:1715196-1715394 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 69, 33 |
| Conread position: | 8-215 |
| Cow position: | chr29:43366050-43365833 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 8-215 |
| Cow position: | chr29:45459664-45459872 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 162 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 69, 148 |
| Conread position: | 19-215 |
| Cow position: | chr29:104526-104726 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 19-215 |
| Cow position: | chr29:2466376-2466175 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 21-214 |
| Cow position: | chr29:12796400-12796207 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 56, 25 |
| Conread position: | 21-215 |
| Cow position: | chr29:2841406-2841214 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 24, 107 |
| Conread position: | 21-222 |
| Cow position: | chr29:32316003-32316206 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 56, 198 |
| Conread position: | 27-215 |
| Cow position: | chr29:2750443-2750258 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 50, 56 |
| Conread position: | 41-215 |
| Cow position: | chr29:17662886-17663063 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 61-212 |
| Cow position: | chr29:10823967-10823813 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 220-531 |
| Cow position: | chr29:26425648-26425945 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 29, 50 |
| Conread position: | 228-401 |
| Cow position: | chr29:22781029-22780859 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 57, 22 |
| Conread position: | 230-576 |
| Cow position: | chr29:31190744-31191086 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 226 |
| Conread position: | 232-403 |
| Cow position: | chr29:23708261-23708434 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 16, 38 |
| Conread position: | 232-532 |
| Cow position: | chr29:12773221-12772933 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 125 |
| Conread position: | 240-377 |
| Cow position: | chr29:29457709-29457570 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 10, 30 |
| Conread position: | 247-402 |
| Cow position: | chr29:29915801-29915957 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 102, 22 |
| Conread position: | 247-403 |
| Cow position: | chr29:6513055-6512899 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 101, 22 |
Show alignments to all cow chromosomes.