Cow genome map


           Conread name:
           Thy1-THY010011B06
        

               Conread position:
               1-196
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               76, 136
               

               Conread position:
               1-205
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 172
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               164
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               167
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               171
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               78, 129
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               142, 38
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               76, 64
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               169
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               76, 131
               

               Conread position:
               1-218
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               76, 223
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 40
               

               Conread position:
               1-228
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               142, 37
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               168
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               74, 47
               

               Conread position:
               5-215
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               72, 124
               

               Conread position:
               5-215
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 41
               

               Conread position:
               6-215
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               166
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               6-215
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               168
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               71, 203
               

               Conread position:
               7-214
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               70, 30
               

               Conread position:
               7-214
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               161
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               136, 173
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               164
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               136, 70
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               165
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               73, 34
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               70, 31
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               70, 18
               

               Conread position:
               7-234
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               37, 133
               

               Conread position:
               7-234
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               31, 213
               

               Conread position:
               7-234
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               176
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               40, 213
               

               Conread position:
               8-215
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               161
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               8-215
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               70, 43
               

               Conread position:
               20-215
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               57, 38
               

               Conread position:
               20-221
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               21-215
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               156
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               21-234
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               122, 50
               

               Conread position:
               24-215
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               53, 97
               

               Conread position:
               26-215
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               27-215
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               27-215
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               50, 146
               

               Conread position:
               30-215
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               149
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               37-215
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               57, 37
               

               Conread position:
               61-215
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               16, 50
               

               Conread position:
               214-531
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               226
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               34, 56
               

               Conread position:
               217-402
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               15, 32
               

               Conread position:
               220-410
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               28, 123
               

               Conread position:
               220-458
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               107, 29
               

               Conread position:
               220-531
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               225
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               28, 50
               

               Conread position:
               221-532
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 18
               

               Conread position:
               228-532
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               228
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               52, 21
               

               Conread position:
               232-404
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               16, 38
               

               Conread position:
               233-402
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               15, 7
               

               Conread position:
               242-473
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               7, 24
               

               Conread position:
               242-526
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 27
               

               Conread position:
               244-576
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               238
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               149, 32
               

               Conread position:
               252-540
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               220
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               94, 135
               

               Conread position:
               273-475
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               161
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               68, 116
               
Show alignments to all cow chromosomes.