Cow genome map


           Conread name:
           Thy1-THY010011B06
        

               Conread position:
               1-152
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               1-195
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               156
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               76, 99
               

               Conread position:
               1-209
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               142, 19
               

               Conread position:
               1-214
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               19, 121
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               76, 96
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               76, 40
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               142, 74
               

               Conread position:
               2-215
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               171
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               2-215
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               167
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               141, 152
               

               Conread position:
               5-215
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               163
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               6-215
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               71, 35
               

               Conread position:
               8-215
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               19-215
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               159
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               19-215
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               157
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               58, 22
               

               Conread position:
               19-228
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               166
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               58, 200
               

               Conread position:
               20-215
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               156
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               21-229
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               24-200
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               27-214
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               10, 40
               

               Conread position:
               27-215
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               50, 136
               

               Conread position:
               27-228
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               17, 189
               

               Conread position:
               28-215
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               32-218
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               45, 9
               

               Conread position:
               55-214
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               23, 56
               

               Conread position:
               61-215
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               16, 45
               

               Conread position:
               80-214
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               92-228
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               51, 126
               

               Conread position:
               148-463
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 53
               

               Conread position:
               199-483
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               14, 72
               

               Conread position:
               200-532
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 11
               

               Conread position:
               219-371
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               32, 51
               

               Conread position:
               219-434
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               30, 92
               

               Conread position:
               219-532
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               231
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               12, 64
               

               Conread position:
               220-530
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               233
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               11, 83
               

               Conread position:
               220-531
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 50
               

               Conread position:
               226-453
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               178
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               25, 57
               

               Conread position:
               228-434
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               23, 33
               

               Conread position:
               230-404
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               19, 40
               

               Conread position:
               231-402
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               18, 39
               

               Conread position:
               232-531
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               15, 38
               

               Conread position:
               232-531
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               16, 138
               

               Conread position:
               238-532
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               13, 42
               

               Conread position:
               248-532
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               112, 50
               

               Conread position:
               253-541
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               214
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               96, 119
               

               Conread position:
               257-531
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               207
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               88, 113
               

               Conread position:
               263-529
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 215
               
Show alignments to all cow chromosomes.