Cow genome map
| Conread name: | Thy1-THY010011B06 |
| Conread position: | 1-215 |
| Cow position: | chr6:7179788-7179578 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 168 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 76, 51 |
| Conread position: | 1-215 |
| Cow position: | chr6:10558759-10558542 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 1-215 |
| Cow position: | chr6:19453824-19454034 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 35, 111 |
| Conread position: | 1-215 |
| Cow position: | chr6:32330890-32330672 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 170 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 1-234 |
| Cow position: | chr6:13276704-13276935 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 103, 65 |
| Conread position: | 7-208 |
| Cow position: | chr6:37116046-37116248 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 162 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 37, 196 |
| Conread position: | 7-215 |
| Cow position: | chr6:2554615-2554824 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 136, 68 |
| Conread position: | 7-215 |
| Cow position: | chr6:13103965-13104176 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 7-215 |
| Cow position: | chr6:13943818-13944027 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 70, 57 |
| Conread position: | 7-215 |
| Cow position: | chr6:35876811-35876600 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 162 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 7-215 |
| Cow position: | chr6:58409005-58408794 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 7-215 |
| Cow position: | chr6:65880774-65880985 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 162 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 11-214 |
| Cow position: | chr6:31568887-31568681 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 68, 15 |
| Conread position: | 19-215 |
| Cow position: | chr6:64715149-64715347 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 154 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 20-228 |
| Cow position: | chr6:38232203-38232407 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 41, 20 |
| Conread position: | 22-220 |
| Cow position: | chr6:49520459-49520257 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 22-228 |
| Cow position: | chr6:65927858-65928066 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 10, 116 |
| Conread position: | 27-215 |
| Cow position: | chr6:3148932-3149122 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 50, 16 |
| Conread position: | 27-215 |
| Cow position: | chr6:16051807-16051998 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 27-215 |
| Cow position: | chr6:28063265-28063454 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 50, 146 |
| Conread position: | 219-531 |
| Cow position: | chr6:18729469-18729774 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 81 |
| Conread position: | 220-401 |
| Cow position: | chr6:5096984-5097168 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 28, 162 |
| Conread position: | 228-393 |
| Cow position: | chr6:8956771-8956604 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 23, 42 |
| Conread position: | 228-532 |
| Cow position: | chr6:10428483-10428191 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 100 |
| Conread position: | 232-430 |
| Cow position: | chr6:980488-980290 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 159 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 17, 187 |
| Conread position: | 235-532 |
| Cow position: | chr6:64700079-64700354 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 209 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 16, 42 |
| Conread position: | 235-532 |
| Cow position: | chr6:65190529-65190254 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 16, 42 |
| Conread position: | 238-402 |
| Cow position: | chr6:61618490-61618656 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 12, 32 |
| Conread position: | 250-452 |
| Cow position: | chr6:8792271-8792469 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 107, 74 |
| Conread position: | 255-450 |
| Cow position: | chr6:12561987-12561794 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 102, 14 |
| Conread position: | 319-453 |
| Cow position: | chr6:22321303-22321169 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 34, 52 |
Show alignments to all cow chromosomes.