Cow genome map
| Conread name: | Thy1-THY010011B06 |
| Conread position: | 1-211 |
| Cow position: | chr7:20106300-20106089 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 69 |
| Conread position: | 1-214 |
| Cow position: | chr7:1611217-1611004 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 76, 54 |
| Conread position: | 1-215 |
| Cow position: | chr7:20799451-20799234 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 1-215 |
| Cow position: | chr7:52120088-52119877 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 76, 46 |
| Conread position: | 1-215 |
| Cow position: | chr7:67417034-67417252 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 166 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 1-220 |
| Cow position: | chr7:6489319-6489106 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 138, 25 |
| Conread position: | 1-228 |
| Cow position: | chr7:21310200-21310425 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 177 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 76, 140 |
| Conread position: | 1-234 |
| Cow position: | chr7:1357690-1357461 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 179 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 142, 29 |
| Conread position: | 3-214 |
| Cow position: | chr7:39556102-39555889 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 6-215 |
| Cow position: | chr7:35297275-35297063 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 162 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 7-215 |
| Cow position: | chr7:3234686-3234475 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 7-215 |
| Cow position: | chr7:5662377-5662582 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 37, 30 |
| Conread position: | 7-215 |
| Cow position: | chr7:23836119-23836328 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 70, 32 |
| Conread position: | 7-215 |
| Cow position: | chr7:27786621-27786831 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 70, 87 |
| Conread position: | 7-215 |
| Cow position: | chr7:41869949-41869738 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 7-219 |
| Cow position: | chr7:23815973-23815758 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 14-215 |
| Cow position: | chr7:58993203-58993402 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 63, 134 |
| Conread position: | 17-210 |
| Cow position: | chr7:60857213-60857015 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 42, 113 |
| Conread position: | 19-214 |
| Cow position: | chr7:26893759-26893957 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 156 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 19-220 |
| Cow position: | chr7:67798859-67799064 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 92, 56 |
| Conread position: | 20-215 |
| Cow position: | chr7:1449494-1449692 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 159 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 20-215 |
| Cow position: | chr7:41490121-41490319 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 22-229 |
| Cow position: | chr7:48633398-48633600 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 54, 77 |
| Conread position: | 27-215 |
| Cow position: | chr7:27102097-27101906 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 28-215 |
| Cow position: | chr7:63385357-63385548 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 31-215 |
| Cow position: | chr7:7257216-7257403 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 32-214 |
| Cow position: | chr7:24056301-24056491 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 33-215 |
| Cow position: | chr7:59136435-59136615 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 110, 37 |
| Conread position: | 33-218 |
| Cow position: | chr7:25439529-25439717 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 61-210 |
| Cow position: | chr7:68907881-68908030 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 16, 102 |
| Conread position: | 61-215 |
| Cow position: | chr7:3154816-3154974 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 64-215 |
| Cow position: | chr7:5183459-5183613 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 219-532 |
| Cow position: | chr7:13230191-13229887 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 233 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 14, 115 |
| Conread position: | 220-432 |
| Cow position: | chr7:564623-564410 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 13, 35 |
| Conread position: | 220-445 |
| Cow position: | chr7:66514998-66514770 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 11, 92 |
| Conread position: | 220-452 |
| Cow position: | chr7:48398250-48398011 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 96 |
| Conread position: | 220-531 |
| Cow position: | chr7:53498379-53498681 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 50 |
| Conread position: | 222-377 |
| Cow position: | chr7:5015442-5015603 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 224-440 |
| Cow position: | chr7:14435430-14435649 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 228-532 |
| Cow position: | chr7:8268716-8268428 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 113 |
| Conread position: | 230-390 |
| Cow position: | chr7:23264682-23264842 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 114, 21 |
| Conread position: | 235-532 |
| Cow position: | chr7:60130843-60130561 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 13, 43 |
| Conread position: | 240-402 |
| Cow position: | chr7:52268814-52268646 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 10, 30 |
| Conread position: | 281-463 |
| Cow position: | chr7:3160511-3160692 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 69, 24 |
| Conread position: | 281-533 |
| Cow position: | chr7:42838326-42838568 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 79, 174 |
| Conread position: | 296-451 |
| Cow position: | chr7:19390785-19390638 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 326-475 |
| Cow position: | chr7:32892008-32892161 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 388-529 |
| Cow position: | chr7:10510304-10510435 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 51, 7 |
Show alignments to all cow chromosomes.