Cow genome map
| Conread name: | Thy1-THY010011B06 |
| Conread position: | 1-215 |
| Cow position: | chr8:13735826-13736040 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 78, 25 |
| Conread position: | 1-215 |
| Cow position: | chr8:42161542-42161331 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 77, 38 |
| Conread position: | 1-215 |
| Cow position: | chr8:47670634-47670855 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 1-215 |
| Cow position: | chr8:61035187-61034973 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 50, 75 |
| Conread position: | 1-220 |
| Cow position: | chr8:32930689-32930910 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 168 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 1-228 |
| Cow position: | chr8:27983617-27983388 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 76, 218 |
| Conread position: | 1-234 |
| Cow position: | chr8:45189274-45189496 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 142, 77 |
| Conread position: | 7-209 |
| Cow position: | chr8:9540308-9540104 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 161 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 76, 45 |
| Conread position: | 7-215 |
| Cow position: | chr8:8518396-8518188 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 70, 58 |
| Conread position: | 7-215 |
| Cow position: | chr8:8910404-8910616 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 45, 85 |
| Conread position: | 7-215 |
| Cow position: | chr8:9735431-9735642 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 7-215 |
| Cow position: | chr8:23216932-23217155 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 8-193 |
| Cow position: | chr8:46091676-46091491 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 69, 78 |
| Conread position: | 8-214 |
| Cow position: | chr8:8316451-8316248 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 69, 37 |
| Conread position: | 8-215 |
| Cow position: | chr8:45316938-45316730 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 69, 27 |
| Conread position: | 9-215 |
| Cow position: | chr8:47885220-47885429 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 13-215 |
| Cow position: | chr8:25542692-25542897 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 19-215 |
| Cow position: | chr8:4686589-4686788 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 19-234 |
| Cow position: | chr8:21158620-21158406 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 58, 108 |
| Conread position: | 21-215 |
| Cow position: | chr8:11821510-11821708 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 24-215 |
| Cow position: | chr8:27925518-27925710 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 53, 104 |
| Conread position: | 24-215 |
| Cow position: | chr8:38607323-38607129 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 153 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 26-215 |
| Cow position: | chr8:8229578-8229386 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 153 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 27-214 |
| Cow position: | chr8:9135692-9135507 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 50, 16 |
| Conread position: | 27-215 |
| Cow position: | chr8:1319248-1319440 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 27-215 |
| Cow position: | chr8:53427527-53427716 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 50, 11 |
| Conread position: | 27-228 |
| Cow position: | chr8:61067041-61066839 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 10, 135 |
| Conread position: | 41-215 |
| Cow position: | chr8:42759162-42759339 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 49-215 |
| Cow position: | chr8:42467551-42467720 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 55-215 |
| Cow position: | chr8:9275244-9275406 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 22, 63 |
| Conread position: | 61-215 |
| Cow position: | chr8:33430159-33430320 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 213-532 |
| Cow position: | chr8:18443377-18443687 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 36, 13 |
| Conread position: | 214-450 |
| Cow position: | chr8:50263922-50263684 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 10 |
| Conread position: | 219-531 |
| Cow position: | chr8:8379113-8379412 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 29, 64 |
| Conread position: | 219-531 |
| Cow position: | chr8:42400474-42400161 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 229 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 30, 51 |
| Conread position: | 219-532 |
| Cow position: | chr8:26229431-26229736 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 101 |
| Conread position: | 219-532 |
| Cow position: | chr8:45484569-45484265 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 182 |
| Conread position: | 220-384 |
| Cow position: | chr8:830514-830349 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 20 |
| Conread position: | 220-524 |
| Cow position: | chr8:2042154-2041854 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 226 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 13, 222 |
| Conread position: | 220-531 |
| Cow position: | chr8:51492101-51492403 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 50 |
| Conread position: | 225-405 |
| Cow position: | chr8:40325879-40325695 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 26, 55 |
| Conread position: | 232-453 |
| Cow position: | chr8:46425755-46425971 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 16, 93 |
| Conread position: | 247-404 |
| Cow position: | chr8:36523281-36523438 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 93, 22 |
| Conread position: | 262-404 |
| Cow position: | chr8:9286553-9286411 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 90, 101 |
| Conread position: | 280-403 |
| Cow position: | chr8:4597261-4597384 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 295-526 |
| Cow position: | chr8:2024824-2024600 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 144 |
Show alignments to all cow chromosomes.