Cow genome map


           Conread name:
           Thy1-THY010011B06
        

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               78, 25
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               77, 38
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               50, 75
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               168
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               1-228
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               177
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               76, 218
               

               Conread position:
               1-234
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               142, 77
               

               Conread position:
               7-209
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               161
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               76, 45
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               70, 58
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               45, 85
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               8-193
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               69, 78
               

               Conread position:
               8-214
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               69, 37
               

               Conread position:
               8-215
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               69, 27
               

               Conread position:
               9-215
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               13-215
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               19-215
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               19-234
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               58, 108
               

               Conread position:
               21-215
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               24-215
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               53, 104
               

               Conread position:
               24-215
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               153
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               26-215
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               153
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               27-214
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               50, 16
               

               Conread position:
               27-215
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               27-215
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               50, 11
               

               Conread position:
               27-228
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               10, 135
               

               Conread position:
               41-215
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               49-215
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               55-215
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               22, 63
               

               Conread position:
               61-215
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               213-532
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               36, 13
               

               Conread position:
               214-450
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 10
               

               Conread position:
               219-531
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               29, 64
               

               Conread position:
               219-531
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               229
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               30, 51
               

               Conread position:
               219-532
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 101
               

               Conread position:
               219-532
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 182
               

               Conread position:
               220-384
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               28, 20
               

               Conread position:
               220-524
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               226
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               13, 222
               

               Conread position:
               220-531
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 50
               

               Conread position:
               225-405
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               26, 55
               

               Conread position:
               232-453
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               16, 93
               

               Conread position:
               247-404
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               93, 22
               

               Conread position:
               262-404
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               90, 101
               

               Conread position:
               280-403
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               295-526
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               46, 144
               
Show alignments to all cow chromosomes.