Cow genome map

Conread name: Thy1-THY010016G11

Conread position: 52-311
Cow position:
Alignm length: 280
Alignm identity: 201
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 71, 37

Conread position: 52-311
Cow position:
Alignm length: 275
Alignm identity: 204
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 27, 10

Conread position: 52-313
Cow position:
Alignm length: 278
Alignm identity: 203
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 41, 77

Conread position: 52-323
Cow position:
Alignm length: 286
Alignm identity: 200
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 93, 52

Conread position: 53-504
Cow position:
Alignm length: 488
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 212

Conread position: 60-334
Cow position:
Alignm length: 283
Alignm identity: 203
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 131, 35

Conread position: 60-367
Cow position:
Alignm length: 322
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 34

Conread position: 60-475
Cow position:
Alignm length: 434
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 220

Conread position: 60-527
Cow position:
Alignm length: 492
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 14

Conread position: 83-317
Cow position:
Alignm length: 242
Alignm identity: 179
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 57, 16

Conread position: 95-378
Cow position:
Alignm length: 302
Alignm identity: 224
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 22, 82

Conread position: 95-527
Cow position:
Alignm length: 461
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 190

Conread position: 102-365
Cow position:
Alignm length: 273
Alignm identity: 192
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 21, 208

Conread position: 110-524
Cow position:
Alignm length: 442
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 177

Conread position: 115-311
Cow position:
Alignm length: 205
Alignm identity: 150
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 49, 36

Conread position: 118-290
Cow position:
Alignm length: 179
Alignm identity: 137
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 42

Conread position: 126-370
Cow position:
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 0

Conread position: 127-306
Cow position:
Alignm length: 185
Alignm identity: 138
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 65, 149

Conread position: 127-334
Cow position:
Alignm length: 218
Alignm identity: 169
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 17, 8

Conread position: 127-525
Cow position:
Alignm length: 422
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 74

Conread position: 128-270
Cow position:
Alignm length: 153
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 128-277
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 87, 67

Conread position: 128-289
Cow position:
Alignm length: 168
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 93, 149

Conread position: 128-292
Cow position:
Alignm length: 172
Alignm identity: 133
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 28, 35

Conread position: 128-299
Cow position:
Alignm length: 182
Alignm identity: 141
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 28, 41

Conread position: 128-302
Cow position:
Alignm length: 176
Alignm identity: 127
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 152, 81

Conread position: 128-303
Cow position:
Alignm length: 181
Alignm identity: 139
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 93, 149

Conread position: 128-304
Cow position:
Alignm length: 180
Alignm identity: 137
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 83, 65

Conread position: 128-304
Cow position:
Alignm length: 177
Alignm identity: 132
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 128-311
Cow position:
Alignm length: 184
Alignm identity: 130
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 144, 0

Conread position: 128-312
Cow position:
Alignm length: 189
Alignm identity: 140
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 28, 41

Conread position: 128-316
Cow position:
Alignm length: 195
Alignm identity: 153
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 36, 28

Conread position: 128-320
Cow position:
Alignm length: 201
Alignm identity: 160
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 71, 10

Conread position: 128-322
Cow position:
Alignm length: 209
Alignm identity: 149
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 128-331
Cow position:
Alignm length: 213
Alignm identity: 166
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 28, 32

Conread position: 128-352
Cow position:
Alignm length: 236
Alignm identity: 172
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 22, 134

Conread position: 128-360
Cow position:
Alignm length: 243
Alignm identity: 178
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 28, 32

Conread position: 128-371
Cow position:
Alignm length: 254
Alignm identity: 184
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 75, 28

Conread position: 128-372
Cow position:
Alignm length: 258
Alignm identity: 186
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 36, 28

Conread position: 128-377
Cow position:
Alignm length: 250
Alignm identity: 176
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 128-377
Cow position:
Alignm length: 274
Alignm identity: 190
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 88, 147

Conread position: 128-379
Cow position:
Alignm length: 264
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 39

Conread position: 128-379
Cow position:
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 18

Conread position: 128-379
Cow position:
Alignm length: 259
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 32

Conread position: 128-381
Cow position:
Alignm length: 266
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 40

Conread position: 128-426
Cow position:
Alignm length: 322
Alignm identity: 231
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 61, 0

Conread position: 128-434
Cow position:
Alignm length: 329
Alignm identity: 230
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 96, 168

Conread position: 128-452
Cow position:
Alignm length: 338
Alignm identity: 233
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 150, 85

Conread position: 128-458
Cow position:
Alignm length: 361
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 6

Conread position: 128-463
Cow position:
Alignm length: 355
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 34

Conread position: 128-472
Cow position:
Alignm length: 360
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 30

Conread position: 128-507
Cow position:
Alignm length: 398
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 149

Conread position: 128-515
Cow position:
Alignm length: 411
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 145

Conread position: 128-516
Cow position:
Alignm length: 412
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 61

Conread position: 128-520
Cow position:
Alignm length: 414
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 151

Conread position: 128-522
Cow position:
Alignm length: 423
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 144

Conread position: 128-527
Cow position:
Alignm length: 426
Alignm identity: 296
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 36, 29

Conread position: 128-527
Cow position:
Alignm length: 421
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 205

Conread position: 128-527
Cow position:
Alignm length: 422
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 78

Conread position: 128-527
Cow position:
Alignm length: 422
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 101

Conread position: 128-527
Cow position:
Alignm length: 412
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 39

Conread position: 128-527
Cow position:
Alignm length: 411
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 32

Conread position: 129-286
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 129-295
Cow position:
Alignm length: 179
Alignm identity: 141
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 27, 155

Conread position: 129-299
Cow position:
Alignm length: 186
Alignm identity: 140
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 86, 29

Conread position: 129-300
Cow position:
Alignm length: 185
Alignm identity: 135
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 129-305
Cow position:
Alignm length: 187
Alignm identity: 135
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 72, 152

Conread position: 129-306
Cow position:
Alignm length: 191
Alignm identity: 148
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 27, 156

Conread position: 129-307
Cow position:
Alignm length: 187
Alignm identity: 136
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 51, 151

Conread position: 129-307
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 129-310
Cow position:
Alignm length: 192
Alignm identity: 146
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 28, 0

Conread position: 129-311
Cow position:
Alignm length: 196
Alignm identity: 141
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 27, 171

Conread position: 129-317
Cow position:
Alignm length: 190
Alignm identity: 140
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 131, 17

Conread position: 129-322
Cow position:
Alignm length: 202
Alignm identity: 154
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 27, 31

Conread position: 129-329
Cow position:
Alignm length: 206
Alignm identity: 155
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 27, 31

Conread position: 129-338
Cow position:
Alignm length: 218
Alignm identity: 164
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 27, 196

Conread position: 129-370
Cow position:
Alignm length: 252
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 50

Conread position: 129-372
Cow position:
Alignm length: 248
Alignm identity: 186
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 58, 170

Conread position: 129-372
Cow position:
Alignm length: 257
Alignm identity: 196
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 27, 154

Conread position: 129-372
Cow position:
Alignm length: 259
Alignm identity: 199
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 27, 155

Conread position: 129-379
Cow position:
Alignm length: 252
Alignm identity: 189
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 154, 30

Conread position: 129-379
Cow position:
Alignm length: 259
Alignm identity: 195
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 28, 132

Conread position: 129-379
Cow position:
Alignm length: 262
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 154

Conread position: 129-463
Cow position:
Alignm length: 348
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 90

Conread position: 129-515
Cow position:
Alignm length: 412
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 363

Conread position: 129-515
Cow position:
Alignm length: 420
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 122

Conread position: 129-525
Cow position:
Alignm length: 421
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 148

Conread position: 129-525
Cow position:
Alignm length: 431
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 65

Conread position: 129-526
Cow position:
Alignm length: 440
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 8

Conread position: 129-527
Cow position:
Alignm length: 414
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 21

Conread position: 129-527
Cow position:
Alignm length: 413
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 18

Conread position: 129-527
Cow position:
Alignm length: 424
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 150

Conread position: 130-304
Cow position:
Alignm length: 184
Alignm identity: 142
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 86, 146

Conread position: 130-306
Cow position:
Alignm length: 179
Alignm identity: 141
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 26, 38

Conread position: 130-308
Cow position:
Alignm length: 189
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 15

Conread position: 130-315
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 34, 0

Conread position: 130-371
Cow position:
Alignm length: 255
Alignm identity: 190
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 60, 155

Conread position: 130-379
Cow position:
Alignm length: 258
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 14

Conread position: 130-387
Cow position:
Alignm length: 262
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 39

Conread position: 130-433
Cow position:
Alignm length: 319
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 148

Conread position: 130-463
Cow position:
Alignm length: 358
Alignm identity: 253
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 79, 31

Conread position: 130-471
Cow position:
Alignm length: 367
Alignm identity: 263
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 26, 30

Conread position: 130-475
Cow position:
Alignm length: 373
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 172

Conread position: 130-527
Cow position:
Alignm length: 422
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 143

Conread position: 131-289
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 25, 152

Conread position: 131-292
Cow position:
Alignm length: 174
Alignm identity: 135
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 25, 153

Conread position: 131-324
Cow position:
Alignm length: 196
Alignm identity: 149
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 175, 0

Conread position: 131-329
Cow position:
Alignm length: 217
Alignm identity: 173
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 25, 159

Conread position: 131-348
Cow position:
Alignm length: 219
Alignm identity: 164
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 90, 7

Conread position: 131-372
Cow position:
Alignm length: 254
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 131-388
Cow position:
Alignm length: 267
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 150

Conread position: 131-481
Cow position:
Alignm length: 373
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 279

Conread position: 131-525
Cow position:
Alignm length: 413
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 74

Conread position: 131-527
Cow position:
Alignm length: 408
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 15

Conread position: 132-287
Cow position:
Alignm length: 164
Alignm identity: 122
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 12, 37

Conread position: 132-527
Cow position:
Alignm length: 417
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 133-527
Cow position:
Alignm length: 413
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 73

Conread position: 140-356
Cow position:
Alignm length: 228
Alignm identity: 172
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 63, 29

Conread position: 143-527
Cow position:
Alignm length: 413
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 113

Conread position: 145-296
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 11, 23

Conread position: 146-461
Cow position:
Alignm length: 334
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 147-307
Cow position:
Alignm length: 168
Alignm identity: 131
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 56, 0

Conread position: 149-320
Cow position:
Alignm length: 183
Alignm identity: 135
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 68, 132

Conread position: 153-525
Cow position:
Alignm length: 406
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 395

Conread position: 161-372
Cow position:
Alignm length: 222
Alignm identity: 175
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 37, 120

Conread position: 161-526
Cow position:
Alignm length: 375
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 143

Conread position: 162-311
Cow position:
Alignm length: 157
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 162-362
Cow position:
Alignm length: 207
Alignm identity: 155
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 62, 84

Conread position: 162-371
Cow position:
Alignm length: 223
Alignm identity: 161
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 53, 0

Conread position: 162-372
Cow position:
Alignm length: 214
Alignm identity: 159
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 48, 111

Conread position: 162-379
Cow position:
Alignm length: 228
Alignm identity: 157
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 62, 105

Conread position: 162-482
Cow position:
Alignm length: 337
Alignm identity: 231
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 74, 112

Conread position: 162-527
Cow position:
Alignm length: 379
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 119

Conread position: 162-527
Cow position:
Alignm length: 396
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 301

Conread position: 163-311
Cow position:
Alignm length: 159
Alignm identity: 125
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 61, 117

Conread position: 163-434
Cow position:
Alignm length: 285
Alignm identity: 210
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 52, 30

Conread position: 166-527
Cow position:
Alignm length: 372
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 161

Show alignments to all cow chromosomes.