Cow genome map
| Conread name: | Thy1-THY010016G11 |
| Conread position: | 52-311 |
| Cow position: | chr12:3056101-3055828 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 71, 37 |
| Conread position: | 52-311 |
| Cow position: | chr12:36954413-36954681 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 27, 10 |
| Conread position: | 52-313 |
| Cow position: | chr12:3076659-3076931 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 41, 77 |
| Conread position: | 52-323 |
| Cow position: | chr12:43788994-43788712 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 93, 52 |
| Conread position: | 53-504 |
| Cow position: | chr12:4008315-4008796 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 212 |
| Conread position: | 60-334 |
| Cow position: | chr12:34148401-34148679 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 131, 35 |
| Conread position: | 60-367 |
| Cow position: | chr12:18577799-18577486 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 34 |
| Conread position: | 60-475 |
| Cow position: | chr12:7978000-7977571 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 220 |
| Conread position: | 60-527 |
| Cow position: | chr12:9143347-9142860 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 14 |
| Conread position: | 83-317 |
| Cow position: | chr12:17495266-17495504 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 57, 16 |
| Conread position: | 95-378 |
| Cow position: | chr12:27803123-27803417 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 224 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 22, 82 |
| Conread position: | 95-527 |
| Cow position: | chr12:4594020-4593561 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 190 |
| Conread position: | 102-365 |
| Cow position: | chr12:17270455-17270191 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 21, 208 |
| Conread position: | 110-524 |
| Cow position: | chr12:36118880-36118441 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 177 |
| Conread position: | 115-311 |
| Cow position: | chr12:29411594-29411790 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 49, 36 |
| Conread position: | 118-290 |
| Cow position: | chr12:41214430-41214603 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 38, 42 |
| Conread position: | 126-370 |
| Cow position: | chr12:30438129-30437886 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 127-306 |
| Cow position: | chr12:24032888-24032705 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 65, 149 |
| Conread position: | 127-334 |
| Cow position: | chr12:31925536-31925326 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 17, 8 |
| Conread position: | 127-525 |
| Cow position: | chr12:2242001-2242420 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 74 |
| Conread position: | 128-270 |
| Cow position: | chr12:17702346-17702498 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 128-277 |
| Cow position: | chr12:8710708-8710560 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 87, 67 |
| Conread position: | 128-289 |
| Cow position: | chr12:18388400-18388566 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 93, 149 |
| Conread position: | 128-292 |
| Cow position: | chr12:12178804-12178634 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 28, 35 |
| Conread position: | 128-299 |
| Cow position: | chr12:32391731-32391551 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 28, 41 |
| Conread position: | 128-302 |
| Cow position: | chr12:16605770-16605943 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 152, 81 |
| Conread position: | 128-303 |
| Cow position: | chr12:5714510-5714331 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 93, 149 |
| Conread position: | 128-304 |
| Cow position: | chr12:6687744-6687570 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 83, 65 |
| Conread position: | 128-304 |
| Cow position: | chr12:28582622-28582791 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 128-311 |
| Cow position: | chr12:15530940-15530759 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 128-312 |
| Cow position: | chr12:33458027-33457843 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 28, 41 |
| Conread position: | 128-316 |
| Cow position: | chr12:30805736-30805543 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 36, 28 |
| Conread position: | 128-320 |
| Cow position: | chr12:30745597-30745398 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 160 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 71, 10 |
| Conread position: | 128-322 |
| Cow position: | chr12:32714926-32714718 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 128-331 |
| Cow position: | chr12:9229600-9229810 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 28, 32 |
| Conread position: | 128-352 |
| Cow position: | chr12:2813109-2812880 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 22, 134 |
| Conread position: | 128-360 |
| Cow position: | chr12:33323613-33323853 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 28, 32 |
| Conread position: | 128-371 |
| Cow position: | chr12:44595929-44596180 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 75, 28 |
| Conread position: | 128-372 |
| Cow position: | chr12:6720205-6719957 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 36, 28 |
| Conread position: | 128-377 |
| Cow position: | chr12:34473742-34473972 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 128-377 |
| Cow position: | chr12:41083951-41083680 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 88, 147 |
| Conread position: | 128-379 |
| Cow position: | chr12:6241194-6240933 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 39 |
| Conread position: | 128-379 |
| Cow position: | chr12:25561252-25560997 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 18 |
| Conread position: | 128-379 |
| Cow position: | chr12:28011017-28011273 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 32 |
| Conread position: | 128-381 |
| Cow position: | chr12:20326656-20326398 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 40 |
| Conread position: | 128-426 |
| Cow position: | chr12:30170550-30170229 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 231 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 128-434 |
| Cow position: | chr12:29969462-29969138 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 96, 168 |
| Conread position: | 128-452 |
| Cow position: | chr12:18550764-18550438 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 150, 85 |
| Conread position: | 128-458 |
| Cow position: | chr12:6210276-6210630 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 6 |
| Conread position: | 128-463 |
| Cow position: | chr12:42966880-42966530 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 34 |
| Conread position: | 128-472 |
| Cow position: | chr12:19872309-19871961 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 30 |
| Conread position: | 128-507 |
| Cow position: | chr12:18123568-18123176 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 149 |
| Conread position: | 128-515 |
| Cow position: | chr12:26868912-26869313 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 145 |
| Conread position: | 128-516 |
| Cow position: | chr12:37770758-37770348 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 61 |
| Conread position: | 128-520 |
| Cow position: | chr12:18421041-18421452 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 151 |
| Conread position: | 128-522 |
| Cow position: | chr12:19691352-19691767 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 144 |
| Conread position: | 128-527 |
| Cow position: | chr12:3579166-3578755 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 296 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 36, 29 |
| Conread position: | 128-527 |
| Cow position: | chr12:19869351-19868933 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 205 |
| Conread position: | 128-527 |
| Cow position: | chr12:31429688-31430100 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 78 |
| Conread position: | 128-527 |
| Cow position: | chr12:32786114-32786520 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 101 |
| Conread position: | 128-527 |
| Cow position: | chr12:34673459-34673857 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 39 |
| Conread position: | 128-527 |
| Cow position: | chr12:40910407-40910814 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 32 |
| Conread position: | 129-286 |
| Cow position: | chr12:25320803-25320642 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 129-295 |
| Cow position: | chr12:4134552-4134375 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 27, 155 |
| Conread position: | 129-299 |
| Cow position: | chr12:24107664-24107842 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 86, 29 |
| Conread position: | 129-300 |
| Cow position: | chr12:34007188-34007004 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 129-305 |
| Cow position: | chr12:1848653-1848838 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 72, 152 |
| Conread position: | 129-306 |
| Cow position: | chr12:4866703-4866515 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 27, 156 |
| Conread position: | 129-307 |
| Cow position: | chr12:42167529-42167344 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 51, 151 |
| Conread position: | 129-307 |
| Cow position: | chr12:42879576-42879410 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 129-310 |
| Cow position: | chr12:25456000-25455809 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 129-311 |
| Cow position: | chr12:27562948-27563141 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 27, 171 |
| Conread position: | 129-317 |
| Cow position: | chr12:43783276-43783451 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 131, 17 |
| Conread position: | 129-322 |
| Cow position: | chr12:29995579-29995779 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 27, 31 |
| Conread position: | 129-329 |
| Cow position: | chr12:22260943-22261138 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 27, 31 |
| Conread position: | 129-338 |
| Cow position: | chr12:46143705-46143489 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 27, 196 |
| Conread position: | 129-370 |
| Cow position: | chr12:42181257-42181503 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 50 |
| Conread position: | 129-372 |
| Cow position: | chr12:3568826-3568583 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 186 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 58, 170 |
| Conread position: | 129-372 |
| Cow position: | chr12:19508684-19508936 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 196 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 27, 154 |
| Conread position: | 129-372 |
| Cow position: | chr12:42254548-42254294 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 199 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 27, 155 |
| Conread position: | 129-379 |
| Cow position: | chr12:12304268-12304030 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 189 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 154, 30 |
| Conread position: | 129-379 |
| Cow position: | chr12:30753604-30753352 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 195 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 28, 132 |
| Conread position: | 129-379 |
| Cow position: | chr12:45814378-45814638 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 154 |
| Conread position: | 129-463 |
| Cow position: | chr12:21486465-21486131 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 90 |
| Conread position: | 129-515 |
| Cow position: | chr12:2711377-2710968 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 363 |
| Conread position: | 129-515 |
| Cow position: | chr12:19420048-19420462 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 122 |
| Conread position: | 129-525 |
| Cow position: | chr12:5800916-5800500 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 148 |
| Conread position: | 129-525 |
| Cow position: | chr12:7000723-7001141 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 65 |
| Conread position: | 129-526 |
| Cow position: | chr12:41159475-41159043 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 8 |
| Conread position: | 129-527 |
| Cow position: | chr12:9107326-9106915 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 21 |
| Conread position: | 129-527 |
| Cow position: | chr12:17472345-17472749 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 18 |
| Conread position: | 129-527 |
| Cow position: | chr12:19039729-19040151 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 150 |
| Conread position: | 130-304 |
| Cow position: | chr12:3510447-3510266 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 86, 146 |
| Conread position: | 130-306 |
| Cow position: | chr12:6410852-6411029 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 26, 38 |
| Conread position: | 130-308 |
| Cow position: | chr12:37993843-37994028 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 37, 15 |
| Conread position: | 130-315 |
| Cow position: | chr12:18518547-18518361 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 130-371 |
| Cow position: | chr12:21393585-21393332 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 190 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 60, 155 |
| Conread position: | 130-379 |
| Cow position: | chr12:10895669-10895922 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 14 |
| Conread position: | 130-387 |
| Cow position: | chr12:17881743-17881491 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 39 |
| Conread position: | 130-433 |
| Cow position: | chr12:35218524-35218841 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 148 |
| Conread position: | 130-463 |
| Cow position: | chr12:17716958-17716603 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 253 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 79, 31 |
| Conread position: | 130-471 |
| Cow position: | chr12:31228454-31228100 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 263 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 26, 30 |
| Conread position: | 130-475 |
| Cow position: | chr12:36501064-36501429 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 172 |
| Conread position: | 130-527 |
| Cow position: | chr12:18233020-18233437 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 143 |
| Conread position: | 131-289 |
| Cow position: | chr12:8921904-8922073 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 25, 152 |
| Conread position: | 131-292 |
| Cow position: | chr12:23154581-23154753 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 25, 153 |
| Conread position: | 131-324 |
| Cow position: | chr12:44622233-44622038 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 175, 0 |
| Conread position: | 131-329 |
| Cow position: | chr12:44905528-44905313 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 25, 159 |
| Conread position: | 131-348 |
| Cow position: | chr12:4116371-4116162 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 90, 7 |
| Conread position: | 131-372 |
| Cow position: | chr12:7109071-7108818 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 131-388 |
| Cow position: | chr12:39486312-39486050 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 150 |
| Conread position: | 131-481 |
| Cow position: | chr12:30636665-30637036 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 279 |
| Conread position: | 131-525 |
| Cow position: | chr12:17982503-17982103 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 74 |
| Conread position: | 131-527 |
| Cow position: | chr12:11056759-11056359 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 15 |
| Conread position: | 132-287 |
| Cow position: | chr12:42698344-42698506 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 12, 37 |
| Conread position: | 132-527 |
| Cow position: | chr12:28187707-28188123 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 133-527 |
| Cow position: | chr12:11836110-11835707 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 241, 73 |
| Conread position: | 140-356 |
| Cow position: | chr12:18020727-18020501 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 63, 29 |
| Conread position: | 143-527 |
| Cow position: | chr12:27055477-27055068 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 113 |
| Conread position: | 145-296 |
| Cow position: | chr12:3093126-3093285 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 11, 23 |
| Conread position: | 146-461 |
| Cow position: | chr12:44013969-44014302 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 147-307 |
| Cow position: | chr12:40307561-40307394 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 149-320 |
| Cow position: | chr12:35771167-35771348 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 68, 132 |
| Conread position: | 153-525 |
| Cow position: | chr12:1883645-1884049 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 395 |
| Conread position: | 161-372 |
| Cow position: | chr12:31060130-31060346 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 175 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 37, 120 |
| Conread position: | 161-526 |
| Cow position: | chr12:3372545-3372173 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 162-311 |
| Cow position: | chr12:18769226-18769382 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 162-362 |
| Cow position: | chr12:41979452-41979656 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 62, 84 |
| Conread position: | 162-371 |
| Cow position: | chr12:794398-794176 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 162-372 |
| Cow position: | chr12:5863421-5863212 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 48, 111 |
| Conread position: | 162-379 |
| Cow position: | chr12:45555569-45555791 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 62, 105 |
| Conread position: | 162-482 |
| Cow position: | chr12:33403169-33403496 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 74, 112 |
| Conread position: | 162-527 |
| Cow position: | chr12:18937239-18936865 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 119 |
| Conread position: | 162-527 |
| Cow position: | chr12:48437052-48437446 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 301 |
| Conread position: | 163-311 |
| Cow position: | chr12:14131893-14132049 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 61, 117 |
| Conread position: | 163-434 |
| Cow position: | chr12:6489137-6489413 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 210 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 52, 30 |
| Conread position: | 166-527 |
| Cow position: | chr12:3600052-3600410 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 161 |
Show alignments to all cow chromosomes.