Cow genome map

Conread name: Thy1-THY010016G11

Conread position: 47-523
Cow position: chr21:1483555-1483077 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 79

Conread position: 47-527
Cow position: chr21:5567062-5566546 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 41

Conread position: 52-369
Cow position: chr21:44251773-44252090 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 36

Conread position: 52-419
Cow position: chr21:47760838-47760453 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 13

Conread position: 55-310
Cow position: chr21:24598733-24598456 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 196
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 55-527
Cow position: chr21:2904403-2904895 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 158

Conread position: 56-457
Cow position: chr21:30990204-30990628 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 230

Conread position: 60-299
Cow position: chr21:10601313-10601560 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 26, 221

Conread position: 60-310
Cow position: chr21:12801687-12801947 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 193
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 63, 34

Conread position: 60-312
Cow position: chr21:19258884-19258621 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 193
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 33, 62

Conread position: 60-482
Cow position: chr21:35897577-35898008 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 29

Conread position: 60-483
Cow position: chr21:33263906-33263463 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 34

Conread position: 60-527
Cow position: chr21:38918266-38917803 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 28

Conread position: 60-527
Cow position: chr21:42540160-42540653 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 36

Conread position: 62-268
Cow position: chr21:27624758-27624551 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 38

Conread position: 66-527
Cow position: chr21:24131126-24130654 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 23

Conread position: 69-299
Cow position: chr21:47861238-47860996 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 175
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 34

Conread position: 80-527
Cow position: chr21:394066-393590 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 208

Conread position: 82-288
Cow position: chr21:802263-802475 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 39, 20

Conread position: 104-379
Cow position: chr21:11640030-11639749 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 207
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 63, 52

Conread position: 115-298
Cow position: chr21:32559362-32559545 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 49, 38

Conread position: 121-527
Cow position: chr21:34254288-34254711 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 159

Conread position: 123-371
Cow position: chr21:33350735-33350481 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 33

Conread position: 126-267
Cow position: chr21:28244455-28244315 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 89, 62

Conread position: 127-351
Cow position: chr21:13409835-13410067 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 178
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 74, 35

Conread position: 127-375
Cow position: chr21:3585378-3585624 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 33

Conread position: 127-526
Cow position: chr21:12366371-12365956 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 35

Conread position: 128-253
Cow position: chr21:18041864-18041989 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 128-284
Cow position: chr21:18790575-18790733 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 128
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 29, 146

Conread position: 128-296
Cow position: chr21:47764131-47764301 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 28, 32

Conread position: 128-298
Cow position: chr21:40065330-40065506 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 128-301
Cow position: chr21:31277806-31277627 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 28, 134

Conread position: 128-302
Cow position: chr21:9998733-9998916 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 153

Conread position: 128-304
Cow position: chr21:46242253-46242436 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 18

Conread position: 128-306
Cow position: chr21:13738552-13738372 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 85, 133

Conread position: 128-308
Cow position: chr21:28443390-28443580 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 32

Conread position: 128-309
Cow position: chr21:47066913-47067089 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 127, 68

Conread position: 128-310
Cow position: chr21:18828323-18828512 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 75, 39

Conread position: 128-310
Cow position: chr21:29002174-29002365 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 75, 153

Conread position: 128-310
Cow position: chr21:41579740-41579548 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 28, 152

Conread position: 128-310
Cow position: chr21:45330617-45330811 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 128-311
Cow position: chr21:6051491-6051302 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 36, 28

Conread position: 128-311
Cow position: chr21:29484963-29484780 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 147
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 87, 145

Conread position: 128-329
Cow position: chr21:28626224-28626019 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 159
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 68, 129

Conread position: 128-340
Cow position: chr21:42348690-42348911 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 174
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 75, 153

Conread position: 128-351
Cow position: chr21:5636734-5636965 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 174
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 28, 32

Conread position: 128-359
Cow position: chr21:49700050-49700288 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 184
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 28, 151

Conread position: 128-367
Cow position: chr21:21223277-21223024 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 189
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 28, 35

Conread position: 128-371
Cow position: chr21:43357274-43357525 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 198
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 28, 133

Conread position: 128-371
Cow position: chr21:46264156-46263913 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 185
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 76, 114

Conread position: 128-372
Cow position: chr21:12960915-12961178 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 190
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 75, 0

Conread position: 128-372
Cow position: chr21:42024106-42023870 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 186
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 69, 146

Conread position: 128-373
Cow position: chr21:395854-395612 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 0

Conread position: 128-373
Cow position: chr21:13756546-13756293 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 171
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 35

Conread position: 128-373
Cow position: chr21:34654060-34653821 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 88, 29

Conread position: 128-377
Cow position: chr21:5898415-5898665 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 185
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 28, 35

Conread position: 128-379
Cow position: chr21:24887995-24887725 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 197
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 86, 34

Conread position: 128-379
Cow position: chr21:39888764-39889016 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 128-388
Cow position: chr21:11644986-11645266 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 201
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 61, 148

Conread position: 128-424
Cow position: chr21:20160662-20160355 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 23

Conread position: 128-425
Cow position: chr21:24858299-24857981 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 28

Conread position: 128-458
Cow position: chr21:17475805-17475457 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 234
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 35

Conread position: 128-463
Cow position: chr21:4399787-4399432 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 194

Conread position: 128-463
Cow position: chr21:23822151-23821803 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 134

Conread position: 128-464
Cow position: chr21:19363478-19363819 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 256
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 16, 151

Conread position: 128-480
Cow position: chr21:18494953-18494595 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 38

Conread position: 128-481
Cow position: chr21:17414565-17414907 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 250
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 28, 10

Conread position: 128-482
Cow position: chr21:26244904-26244551 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 263
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 28, 35

Conread position: 128-484
Cow position: chr21:7581922-7582292 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 40

Conread position: 128-514
Cow position: chr21:41957192-41957602 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 146

Conread position: 128-520
Cow position: chr21:32297523-32297927 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 147

Conread position: 128-522
Cow position: chr21:22856204-22855795 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 13

Conread position: 128-525
Cow position: chr21:17714301-17713884 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 283
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 28, 35

Conread position: 128-525
Cow position: chr21:33982822-33983239 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 29

Conread position: 128-526
Cow position: chr21:13703700-13704116 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 285
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 28, 32

Conread position: 128-527
Cow position: chr21:3813496-3813899 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 178

Conread position: 128-527
Cow position: chr21:10264017-10263609 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 35

Conread position: 128-527
Cow position: chr21:13751371-13750957 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 281
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 69, 60

Conread position: 128-527
Cow position: chr21:15584436-15584832 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 29

Conread position: 128-527
Cow position: chr21:17416777-17417186 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 353

Conread position: 128-527
Cow position: chr21:18932472-18932063 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 35

Conread position: 128-527
Cow position: chr21:18935745-18935341 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 32

Conread position: 128-527
Cow position: chr21:19958210-19957800 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 32

Conread position: 128-527
Cow position: chr21:20925522-20925937 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 150

Conread position: 128-527
Cow position: chr21:23683532-23683110 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 81

Conread position: 128-527
Cow position: chr21:26829274-26829669 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 28

Conread position: 128-527
Cow position: chr21:27229810-27230223 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 40

Conread position: 128-527
Cow position: chr21:28989598-28989180 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 142

Conread position: 128-527
Cow position: chr21:33210186-33209769 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 39

Conread position: 128-527
Cow position: chr21:36162976-36163388 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 295

Conread position: 128-527
Cow position: chr21:39401578-39401162 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 35

Conread position: 129-259
Cow position: chr21:24642503-24642366 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 129-282
Cow position: chr21:32339754-32339912 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 27, 148

Conread position: 129-287
Cow position: chr21:17183906-17183741 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 27, 132

Conread position: 129-289
Cow position: chr21:15911383-15911218 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 129-294
Cow position: chr21:28027790-28027616 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 152

Conread position: 129-297
Cow position: chr21:33791383-33791558 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 37, 150

Conread position: 129-300
Cow position: chr21:21169509-21169692 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 9

Conread position: 129-301
Cow position: chr21:31253527-31253341 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 27, 0

Conread position: 129-303
Cow position: chr21:21077309-21077133 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 27, 34

Conread position: 129-311
Cow position: chr21:22860982-22860798 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 80, 146

Conread position: 129-311
Cow position: chr21:24094765-24094948 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 145
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 13, 99

Conread position: 129-311
Cow position: chr21:40134143-40133951 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 92, 0

Conread position: 129-311
Cow position: chr21:41621107-41620915 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 73, 153

Conread position: 129-324
Cow position: chr21:30592321-30592515 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 27

Conread position: 129-329
Cow position: chr21:24797670-24797473 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 86, 72

Conread position: 129-342
Cow position: chr21:41878454-41878241 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 27, 34

Conread position: 129-366
Cow position: chr21:36857610-36857371 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 177
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 26, 17

Conread position: 129-366
Cow position: chr21:39403553-39403797 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 188
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 149

Conread position: 129-370
Cow position: chr21:47802274-47802525 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 31

Conread position: 129-372
Cow position: chr21:6834033-6833787 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 184
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 27, 205

Conread position: 129-372
Cow position: chr21:10727260-10727016 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 145

Conread position: 129-372
Cow position: chr21:17282688-17282438 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 129-372
Cow position: chr21:40058788-40058540 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 146

Conread position: 129-372
Cow position: chr21:42384493-42384243 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 191
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 27, 199

Conread position: 129-379
Cow position: chr21:32237278-32237028 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 61

Conread position: 129-379
Cow position: chr21:41155846-41155590 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 193
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 85, 143

Conread position: 129-379
Cow position: chr21:41974392-41974651 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 129-382
Cow position: chr21:40786661-40786396 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 198
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 27, 18

Conread position: 129-464
Cow position: chr21:9416231-9415874 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 240

Conread position: 129-475
Cow position: chr21:31159246-31158873 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 237

Conread position: 129-484
Cow position: chr21:38867589-38867955 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 67

Conread position: 129-503
Cow position: chr21:12617120-12616736 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 16

Conread position: 129-512
Cow position: chr21:24222555-24222956 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 202

Conread position: 129-514
Cow position: chr21:5455006-5455408 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 89

Conread position: 129-517
Cow position: chr21:33562997-33562613 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 124

Conread position: 129-523
Cow position: chr21:17433269-17433680 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 34

Conread position: 129-525
Cow position: chr21:643310-642916 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 21

Conread position: 129-525
Cow position: chr21:18289646-18289234 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 29

Conread position: 129-525
Cow position: chr21:21216160-21216571 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 28

Conread position: 129-525
Cow position: chr21:38900761-38900354 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 34

Conread position: 129-527
Cow position: chr21:724903-725320 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 154

Conread position: 129-527
Cow position: chr21:4080342-4079922 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 144

Conread position: 129-527
Cow position: chr21:4998503-4998917 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 147

Conread position: 129-527
Cow position: chr21:13395537-13395122 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 147

Conread position: 129-527
Cow position: chr21:13898168-13897756 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 145

Conread position: 129-527
Cow position: chr21:27863532-27863952 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 153

Conread position: 129-527
Cow position: chr21:34390992-34391398 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 147

Conread position: 129-527
Cow position: chr21:44825902-44826299 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 144

Conread position: 130-300
Cow position: chr21:38449465-38449645 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 26, 30

Conread position: 130-373
Cow position: chr21:16187826-16188061 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 188
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 61, 128

Conread position: 130-379
Cow position: chr21:2679538-2679287 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 195
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 26, 35

Conread position: 130-457
Cow position: chr21:23586862-23586501 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 33

Conread position: 130-458
Cow position: chr21:37479941-37479596 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 148

Conread position: 130-467
Cow position: chr21:32574705-32574352 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 259
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 13, 68

Conread position: 130-483
Cow position: chr21:15976615-15976254 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 8

Conread position: 130-527
Cow position: chr21:21480198-21480611 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 32

Conread position: 130-527
Cow position: chr21:28599759-28599339 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 233

Conread position: 131-298
Cow position: chr21:5426922-5426755 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 25, 144

Conread position: 131-304
Cow position: chr21:13585088-13585255 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 140
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 78, 0

Conread position: 131-379
Cow position: chr21:11706764-11707022 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 196
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 26, 153

Conread position: 131-480
Cow position: chr21:938015-937667 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 118

Conread position: 131-517
Cow position: chr21:28924095-28923720 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 13

Conread position: 131-524
Cow position: chr21:44671738-44671323 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 131-527
Cow position: chr21:911986-912393 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 29

Conread position: 131-527
Cow position: chr21:25764619-25764203 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 148

Conread position: 132-527
Cow position: chr21:7716804-7717219 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 152

Conread position: 132-527
Cow position: chr21:38692166-38691762 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 58

Conread position: 133-320
Cow position: chr21:23535694-23535500 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 37, 143

Conread position: 134-300
Cow position: chr21:9334282-9334452 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 22, 142

Conread position: 135-309
Cow position: chr21:17302402-17302578 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 69, 117

Conread position: 138-305
Cow position: chr21:35897456-35897289 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 25

Conread position: 138-481
Cow position: chr21:30626205-30626567 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 146

Conread position: 141-372
Cow position: chr21:28733943-28734177 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 16

Conread position: 142-378
Cow position: chr21:17709800-17709557 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 166
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 66, 138

Conread position: 142-378
Cow position: chr21:20108858-20109103 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 74, 138

Conread position: 143-527
Cow position: chr21:2367303-2366915 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 61

Conread position: 145-458
Cow position: chr21:20162505-20162172 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 108

Conread position: 146-378
Cow position: chr21:13717889-13718131 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 70, 134

Conread position: 147-324
Cow position: chr21:37282274-37282092 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 66, 130

Conread position: 147-423
Cow position: chr21:1511034-1510767 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 68, 145

Conread position: 148-487
Cow position: chr21:5153581-5153225 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 183

Conread position: 160-308
Cow position: chr21:16270684-16270531 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 161-526
Cow position: chr21:26853212-26852819 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 267
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 32, 309

Conread position: 162-300
Cow position: chr21:37208157-37208302 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 162-310
Cow position: chr21:21000080-21000229 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 53, 76

Conread position: 162-312
Cow position: chr21:24714602-24714448 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 107

Conread position: 162-351
Cow position: chr21:28919672-28919867 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 39, 94

Conread position: 162-358
Cow position: chr21:13256755-13256544 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 162-359
Cow position: chr21:40899290-40899086 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 42, 198

Conread position: 162-370
Cow position: chr21:36819263-36819486 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 62, 0

Conread position: 162-371
Cow position: chr21:28993672-28993890 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 62, 0

Conread position: 162-372
Cow position: chr21:14464529-14464300 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 39, 121

Conread position: 162-373
Cow position: chr21:426743-426526 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 176
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 53, 119

Conread position: 162-377
Cow position: chr21:39884011-39883798 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 147
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 50, 110

Conread position: 162-404
Cow position: chr21:12973303-12973560 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 177
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 42, 115

Conread position: 162-418
Cow position: chr21:23478769-23479022 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 198
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 53, 110

Conread position: 162-478
Cow position: chr21:8289687-8290026 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 246
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 62, 119

Conread position: 162-482
Cow position: chr21:46463144-46462804 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 86

Conread position: 162-526
Cow position: chr21:22140389-22140773 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 102

Conread position: 162-527
Cow position: chr21:15742149-15742535 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 40

Conread position: 162-527
Cow position: chr21:29942956-29942564 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 104

Conread position: 162-527
Cow position: chr21:31576460-31576080 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 103

Conread position: 163-370
Cow position: chr21:43603272-43603485 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 103

Conread position: 163-447
Cow position: chr21:28029350-28029046 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 222
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 53, 118

Conread position: 164-329
Cow position: chr21:11877331-11877162 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 57, 102

Conread position: 165-527
Cow position: chr21:29214204-29214588 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 110

Conread position: 168-379
Cow position: chr21:29954493-29954699 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 166
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 33, 0

Conread position: 169-388
Cow position: chr21:32828952-32829177 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 189

Show alignments to all cow chromosomes.