Non-Coding RNA Search

Cow genome map


           Conread name:
           Thy1-THY010016G11
        

               Conread position:
               47-523
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 79
               

               Conread position:
               47-527
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 41
               

               Conread position:
               52-369
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 36
               

               Conread position:
               52-419
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 13
               

               Conread position:
               55-310
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               55-527
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 158
               

               Conread position:
               56-457
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 230
               

               Conread position:
               60-299
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               26, 221
               

               Conread position:
               60-310
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               63, 34
               

               Conread position:
               60-312
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               33, 62
               

               Conread position:
               60-482
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 29
               

               Conread position:
               60-483
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 34
               

               Conread position:
               60-527
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 28
               

               Conread position:
               60-527
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 36
               

               Conread position:
               62-268
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               18, 38
               

               Conread position:
               66-527
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 23
               

               Conread position:
               69-299
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               11, 34
               

               Conread position:
               80-527
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 208
               

               Conread position:
               82-288
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               39, 20
               

               Conread position:
               104-379
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               207
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               63, 52
               

               Conread position:
               115-298
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               49, 38
               

               Conread position:
               121-527
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 159
               

               Conread position:
               123-371
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 33
               

               Conread position:
               126-267
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               89, 62
               

               Conread position:
               127-351
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               74, 35
               

               Conread position:
               127-375
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 33
               

               Conread position:
               127-526
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 35
               

               Conread position:
               128-253
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               128-284
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               29, 146
               

               Conread position:
               128-296
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               28, 32
               

               Conread position:
               128-298
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               128-301
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               28, 134
               

               Conread position:
               128-302
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               28, 153
               

               Conread position:
               128-304
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               28, 18
               

               Conread position:
               128-306
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               85, 133
               

               Conread position:
               128-308
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               28, 32
               

               Conread position:
               128-309
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               127, 68
               

               Conread position:
               128-310
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               75, 39
               

               Conread position:
               128-310
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               75, 153
               

               Conread position:
               128-310
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               28, 152
               

               Conread position:
               128-310
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               128-311
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               36, 28
               

               Conread position:
               128-311
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               147
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               87, 145
               

               Conread position:
               128-329
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               68, 129
               

               Conread position:
               128-340
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               174
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               75, 153
               

               Conread position:
               128-351
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               28, 32
               

               Conread position:
               128-359
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               184
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               28, 151
               

               Conread position:
               128-367
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               28, 35
               

               Conread position:
               128-371
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               198
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               28, 133
               

               Conread position:
               128-371
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               185
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               76, 114
               

               Conread position:
               128-372
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               128-372
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               69, 146
               

               Conread position:
               128-373
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               128-373
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               28, 35
               

               Conread position:
               128-373
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               88, 29
               

               Conread position:
               128-377
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               28, 35
               

               Conread position:
               128-379
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               86, 34
               

               Conread position:
               128-379
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               128-388
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               61, 148
               

               Conread position:
               128-424
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 23
               

               Conread position:
               128-425
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 28
               

               Conread position:
               128-458
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               28, 35
               

               Conread position:
               128-463
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 194
               

               Conread position:
               128-463
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 134
               

               Conread position:
               128-464
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               256
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               16, 151
               

               Conread position:
               128-480
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 38
               

               Conread position:
               128-481
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               250
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               28, 10
               

               Conread position:
               128-482
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               263
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               28, 35
               

               Conread position:
               128-484
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 40
               

               Conread position:
               128-514
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 146
               

               Conread position:
               128-520
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 147
               

               Conread position:
               128-522
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 13
               

               Conread position:
               128-525
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               283
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               28, 35
               

               Conread position:
               128-525
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 29
               

               Conread position:
               128-526
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               285
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               28, 32
               

               Conread position:
               128-527
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 178
               

               Conread position:
               128-527
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 35
               

               Conread position:
               128-527
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               281
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               69, 60
               

               Conread position:
               128-527
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 29
               

               Conread position:
               128-527
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 353
               

               Conread position:
               128-527
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 35
               

               Conread position:
               128-527
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 32
               

               Conread position:
               128-527
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 32
               

               Conread position:
               128-527
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 150
               

               Conread position:
               128-527
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 81
               

               Conread position:
               128-527
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 28
               

               Conread position:
               128-527
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 40
               

               Conread position:
               128-527
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 142
               

               Conread position:
               128-527
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 39
               

               Conread position:
               128-527
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 295
               

               Conread position:
               128-527
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 35
               

               Conread position:
               129-259
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               129-282
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               27, 148
               

               Conread position:
               129-287
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               27, 132
               

               Conread position:
               129-289
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               129-294
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               27, 152
               

               Conread position:
               129-297
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               37, 150
               

               Conread position:
               129-300
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               14, 9
               

               Conread position:
               129-301
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               129-303
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               27, 34
               

               Conread position:
               129-311
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               80, 146
               

               Conread position:
               129-311
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               13, 99
               

               Conread position:
               129-311
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               129-311
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               73, 153
               

               Conread position:
               129-324
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               35, 27
               

               Conread position:
               129-329
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               86, 72
               

               Conread position:
               129-342
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               27, 34
               

               Conread position:
               129-366
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               26, 17
               

               Conread position:
               129-366
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               39, 149
               

               Conread position:
               129-370
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 31
               

               Conread position:
               129-372
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               27, 205
               

               Conread position:
               129-372
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 145
               

               Conread position:
               129-372
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               129-372
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 146
               

               Conread position:
               129-372
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               191
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               27, 199
               

               Conread position:
               129-379
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 61
               

               Conread position:
               129-379
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               85, 143
               

               Conread position:
               129-379
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               129-382
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               27, 18
               

               Conread position:
               129-464
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 240
               

               Conread position:
               129-475
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 237
               

               Conread position:
               129-484
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 67
               

               Conread position:
               129-503
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 16
               

               Conread position:
               129-512
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 202
               

               Conread position:
               129-514
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 89
               

               Conread position:
               129-517
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 124
               

               Conread position:
               129-523
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 34
               

               Conread position:
               129-525
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 21
               

               Conread position:
               129-525
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 29
               

               Conread position:
               129-525
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 28
               

               Conread position:
               129-525
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 34
               

               Conread position:
               129-527
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 154
               

               Conread position:
               129-527
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 144
               

               Conread position:
               129-527
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 147
               

               Conread position:
               129-527
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 147
               

               Conread position:
               129-527
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 145
               

               Conread position:
               129-527
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 153
               

               Conread position:
               129-527
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 147
               

               Conread position:
               129-527
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 144
               

               Conread position:
               130-300
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               26, 30
               

               Conread position:
               130-373
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               188
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               61, 128
               

               Conread position:
               130-379
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               26, 35
               

               Conread position:
               130-457
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 33
               

               Conread position:
               130-458
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 148
               

               Conread position:
               130-467
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               13, 68
               

               Conread position:
               130-483
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 8
               

               Conread position:
               130-527
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 32
               

               Conread position:
               130-527
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 233
               

               Conread position:
               131-298
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               25, 144
               

               Conread position:
               131-304
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               131-379
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               196
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               26, 153
               

               Conread position:
               131-480
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 118
               

               Conread position:
               131-517
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 13
               

               Conread position:
               131-524
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               131-527
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 29
               

               Conread position:
               131-527
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 148
               

               Conread position:
               132-527
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 152
               

               Conread position:
               132-527
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 58
               

               Conread position:
               133-320
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               37, 143
               

               Conread position:
               134-300
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               22, 142
               

               Conread position:
               135-309
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               69, 117
               

               Conread position:
               138-305
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               18, 25
               

               Conread position:
               138-481
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 146
               

               Conread position:
               141-372
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 16
               

               Conread position:
               142-378
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               66, 138
               

               Conread position:
               142-378
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               74, 138
               

               Conread position:
               143-527
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 61
               

               Conread position:
               145-458
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 108
               

               Conread position:
               146-378
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               70, 134
               

               Conread position:
               147-324
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               66, 130
               

               Conread position:
               147-423
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               68, 145
               

               Conread position:
               148-487
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 183
               

               Conread position:
               160-308
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               161-526
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               267
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               32, 309
               

               Conread position:
               162-300
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               162-310
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               53, 76
               

               Conread position:
               162-312
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               31, 107
               

               Conread position:
               162-351
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               39, 94
               

               Conread position:
               162-358
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               162-359
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               42, 198
               

               Conread position:
               162-370
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               162-371
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               162-372
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               39, 121
               

               Conread position:
               162-373
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               53, 119
               

               Conread position:
               162-377
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               50, 110
               

               Conread position:
               162-404
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               42, 115
               

               Conread position:
               162-418
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               198
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               53, 110
               

               Conread position:
               162-478
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               246
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               62, 119
               

               Conread position:
               162-482
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 86
               

               Conread position:
               162-526
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 102
               

               Conread position:
               162-527
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 40
               

               Conread position:
               162-527
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 104
               

               Conread position:
               162-527
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 103
               

               Conread position:
               163-370
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               31, 103
               

               Conread position:
               163-447
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               222
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               53, 118
               

               Conread position:
               164-329
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               57, 102
               

               Conread position:
               165-527
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 110
               

               Conread position:
               168-379
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               166
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               169-388
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               52, 189
               
Show alignments to all cow chromosomes.
Conread position:	47-523
Cow position:
Alignm length:	492
Alignm identity:	328
Alignm E-value:	0
Alignm gaps (pig, cow):	37, 79
Conread position:	47-527
Cow position:
Alignm length:	523
Alignm identity:	374
Alignm E-value:	0
Alignm gaps (pig, cow):	109, 41
Conread position:	52-369
Cow position:
Alignm length:	326
Alignm identity:	241
Alignm E-value:	0
Alignm gaps (pig, cow):	79, 36
Conread position:	52-419
Cow position:
Alignm length:	396
Alignm identity:	288
Alignm E-value:	0
Alignm gaps (pig, cow):	69, 13
Conread position:	55-310
Cow position:
Alignm length:	278
Alignm identity:	196
Alignm E-value:	5e-28
Alignm gaps (pig, cow):	10, 0
Conread position:	55-527
Cow position:
Alignm length:	501
Alignm identity:	365
Alignm E-value:	0
Alignm gaps (pig, cow):	10, 158
Conread position:	56-457
Cow position:
Alignm length:	428
Alignm identity:	311
Alignm E-value:	0
Alignm gaps (pig, cow):	9, 230
Conread position:	60-299
Cow position:
Alignm length:	249
Alignm identity:	174
Alignm E-value:	2e-31
Alignm gaps (pig, cow):	26, 221
Conread position:	60-310
Cow position:
Alignm length:	267
Alignm identity:	193
Alignm E-value:	7e-31
Alignm gaps (pig, cow):	63, 34
Conread position:	60-312
Cow position:
Alignm length:	266
Alignm identity:	193
Alignm E-value:	4e-36
Alignm gaps (pig, cow):	33, 62
Conread position:	60-482
Cow position:
Alignm length:	442
Alignm identity:	323
Alignm E-value:	0
Alignm gaps (pig, cow):	40, 29
Conread position:	60-483
Cow position:
Alignm length:	450
Alignm identity:	321
Alignm E-value:	0
Alignm gaps (pig, cow):	63, 34
Conread position:	60-527
Cow position:
Alignm length:	477
Alignm identity:	344
Alignm E-value:	0
Alignm gaps (pig, cow):	63, 28
Conread position:	62-268
Cow position:
Alignm length:	211
Alignm identity:	143
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	18, 38
Conread position:	66-527
Cow position:
Alignm length:	478
Alignm identity:	352
Alignm E-value:	0
Alignm gaps (pig, cow):	63, 23
Conread position:	69-299
Cow position:
Alignm length:	248
Alignm identity:	175
Alignm E-value:	1e-24
Alignm gaps (pig, cow):	11, 34
Conread position:	80-527
Cow position:
Alignm length:	479
Alignm identity:	357
Alignm E-value:	0
Alignm gaps (pig, cow):	43, 208
Conread position:	82-288
Cow position:
Alignm length:	214
Alignm identity:	155
Alignm E-value:	7e-31
Alignm gaps (pig, cow):	39, 20
Conread position:	104-379
Cow position:
Alignm length:	285
Alignm identity:	207
Alignm E-value:	1.99965e-42
Alignm gaps (pig, cow):	63, 52
Conread position:	115-298
Cow position:
Alignm length:	187
Alignm identity:	137
Alignm E-value:	1e-27
Alignm gaps (pig, cow):	49, 38