Cow genome map

Conread name: Thy1-THY010016G11

Conread position: 3-362
Cow position:
Alignm length: 370
Alignm identity: 239
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 63

Conread position: 19-288
Cow position:
Alignm length: 281
Alignm identity: 185
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 67, 36

Conread position: 52-428
Cow position:
Alignm length: 405
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 163

Conread position: 52-527
Cow position:
Alignm length: 495
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 36

Conread position: 56-525
Cow position:
Alignm length: 478
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 12

Conread position: 57-345
Cow position:
Alignm length: 290
Alignm identity: 203
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 158, 22

Conread position: 58-324
Cow position:
Alignm length: 274
Alignm identity: 197
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 35, 71

Conread position: 60-364
Cow position:
Alignm length: 312
Alignm identity: 219
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 97, 35

Conread position: 60-366
Cow position:
Alignm length: 314
Alignm identity: 227
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 77, 34

Conread position: 60-367
Cow position:
Alignm length: 315
Alignm identity: 221
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 63, 28

Conread position: 60-527
Cow position:
Alignm length: 486
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 28

Conread position: 62-304
Cow position:
Alignm length: 261
Alignm identity: 192
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 61, 25

Conread position: 75-527
Cow position:
Alignm length: 468
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 135

Conread position: 76-290
Cow position:
Alignm length: 219
Alignm identity: 154
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 80, 12

Conread position: 80-527
Cow position:
Alignm length: 460
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 77

Conread position: 82-300
Cow position:
Alignm length: 232
Alignm identity: 168
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 40, 17

Conread position: 93-279
Cow position:
Alignm length: 193
Alignm identity: 143
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 5, 185

Conread position: 99-299
Cow position:
Alignm length: 219
Alignm identity: 162
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 104-408
Cow position:
Alignm length: 317
Alignm identity: 229
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 63, 228

Conread position: 110-505
Cow position:
Alignm length: 420
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 187

Conread position: 114-527
Cow position:
Alignm length: 440
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 47

Conread position: 115-527
Cow position:
Alignm length: 436
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 47

Conread position: 117-525
Cow position:
Alignm length: 435
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 11

Conread position: 123-299
Cow position:
Alignm length: 186
Alignm identity: 143
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 73, 44

Conread position: 127-302
Cow position:
Alignm length: 186
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 19, 153

Conread position: 127-481
Cow position:
Alignm length: 369
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 153

Conread position: 128-254
Cow position:
Alignm length: 135
Alignm identity: 109
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 36, 29

Conread position: 128-281
Cow position:
Alignm length: 163
Alignm identity: 124
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 28, 141

Conread position: 128-282
Cow position:
Alignm length: 157
Alignm identity: 123
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 67, 0

Conread position: 128-299
Cow position:
Alignm length: 183
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 128-300
Cow position:
Alignm length: 178
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 69, 29

Conread position: 128-302
Cow position:
Alignm length: 186
Alignm identity: 139
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 12, 154

Conread position: 128-303
Cow position:
Alignm length: 182
Alignm identity: 135
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 67, 0

Conread position: 128-305
Cow position:
Alignm length: 187
Alignm identity: 134
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 128-310
Cow position:
Alignm length: 186
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 61

Conread position: 128-311
Cow position:
Alignm length: 193
Alignm identity: 143
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 16, 9

Conread position: 128-311
Cow position:
Alignm length: 192
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 75, 33

Conread position: 128-311
Cow position:
Alignm length: 197
Alignm identity: 149
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 28, 17

Conread position: 128-336
Cow position:
Alignm length: 220
Alignm identity: 160
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 37, 28

Conread position: 128-351
Cow position:
Alignm length: 227
Alignm identity: 177
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 28, 35

Conread position: 128-355
Cow position:
Alignm length: 233
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 148

Conread position: 128-366
Cow position:
Alignm length: 246
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 150

Conread position: 128-372
Cow position:
Alignm length: 250
Alignm identity: 188
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 61, 163

Conread position: 128-373
Cow position:
Alignm length: 256
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 28

Conread position: 128-379
Cow position:
Alignm length: 271
Alignm identity: 185
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 93, 7

Conread position: 128-424
Cow position:
Alignm length: 318
Alignm identity: 217
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 81, 207

Conread position: 128-449
Cow position:
Alignm length: 350
Alignm identity: 222
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 87, 302

Conread position: 128-451
Cow position:
Alignm length: 344
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 40

Conread position: 128-457
Cow position:
Alignm length: 341
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 151

Conread position: 128-460
Cow position:
Alignm length: 357
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 32

Conread position: 128-468
Cow position:
Alignm length: 357
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 42

Conread position: 128-482
Cow position:
Alignm length: 379
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 128-510
Cow position:
Alignm length: 393
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 28

Conread position: 128-519
Cow position:
Alignm length: 428
Alignm identity: 296
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 67, 152

Conread position: 128-521
Cow position:
Alignm length: 418
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 17

Conread position: 128-524
Cow position:
Alignm length: 427
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 18

Conread position: 128-525
Cow position:
Alignm length: 417
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 40

Conread position: 128-527
Cow position:
Alignm length: 422
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 36

Conread position: 128-527
Cow position:
Alignm length: 414
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 39

Conread position: 128-527
Cow position:
Alignm length: 424
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 35

Conread position: 128-527
Cow position:
Alignm length: 420
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 144

Conread position: 128-527
Cow position:
Alignm length: 439
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 77

Conread position: 128-527
Cow position:
Alignm length: 425
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 153

Conread position: 128-527
Cow position:
Alignm length: 422
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 153

Conread position: 128-527
Cow position:
Alignm length: 403
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 86

Conread position: 128-527
Cow position:
Alignm length: 434
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 143

Conread position: 128-527
Cow position:
Alignm length: 426
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 128-527
Cow position:
Alignm length: 429
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 40

Conread position: 129-269
Cow position:
Alignm length: 151
Alignm identity: 117
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 129-280
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 27, 116

Conread position: 129-290
Cow position:
Alignm length: 169
Alignm identity: 132
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 27, 149

Conread position: 129-293
Cow position:
Alignm length: 175
Alignm identity: 134
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 27, 39

Conread position: 129-300
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 77

Conread position: 129-310
Cow position:
Alignm length: 192
Alignm identity: 139
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 93, 150

Conread position: 129-311
Cow position:
Alignm length: 195
Alignm identity: 148
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 27, 0

Conread position: 129-311
Cow position:
Alignm length: 186
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 34

Conread position: 129-320
Cow position:
Alignm length: 202
Alignm identity: 154
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 27, 152

Conread position: 129-369
Cow position:
Alignm length: 249
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 79

Conread position: 129-370
Cow position:
Alignm length: 252
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 31

Conread position: 129-372
Cow position:
Alignm length: 261
Alignm identity: 199
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 27, 152

Conread position: 129-379
Cow position:
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 33

Conread position: 129-379
Cow position:
Alignm length: 253
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 159

Conread position: 129-379
Cow position:
Alignm length: 263
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 154

Conread position: 129-417
Cow position:
Alignm length: 303
Alignm identity: 211
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 39, 150

Conread position: 129-468
Cow position:
Alignm length: 366
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 134

Conread position: 129-469
Cow position:
Alignm length: 354
Alignm identity: 211
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 87, 151

Conread position: 129-471
Cow position:
Alignm length: 367
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 29

Conread position: 129-481
Cow position:
Alignm length: 376
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 148

Conread position: 129-498
Cow position:
Alignm length: 391
Alignm identity: 272
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 66, 116

Conread position: 129-508
Cow position:
Alignm length: 402
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 31

Conread position: 129-525
Cow position:
Alignm length: 418
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 138

Conread position: 129-525
Cow position:
Alignm length: 418
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 9

Conread position: 129-527
Cow position:
Alignm length: 422
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 152

Conread position: 129-527
Cow position:
Alignm length: 419
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 68

Conread position: 129-527
Cow position:
Alignm length: 416
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 34

Conread position: 129-527
Cow position:
Alignm length: 422
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 31

Conread position: 129-527
Cow position:
Alignm length: 414
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 152

Conread position: 129-527
Cow position:
Alignm length: 422
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 146

Conread position: 130-263
Cow position:
Alignm length: 141
Alignm identity: 108
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 26, 30

Conread position: 130-281
Cow position:
Alignm length: 153
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 144, 71

Conread position: 130-291
Cow position:
Alignm length: 168
Alignm identity: 130
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 65, 148

Conread position: 130-300
Cow position:
Alignm length: 181
Alignm identity: 145
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 26, 38

Conread position: 130-307
Cow position:
Alignm length: 185
Alignm identity: 144
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 26, 149

Conread position: 130-310
Cow position:
Alignm length: 188
Alignm identity: 143
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 26, 30

Conread position: 130-379
Cow position:
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 131-311
Cow position:
Alignm length: 184
Alignm identity: 138
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 33, 143

Conread position: 131-311
Cow position:
Alignm length: 182
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 149, 72

Conread position: 131-470
Cow position:
Alignm length: 365
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 151

Conread position: 131-486
Cow position:
Alignm length: 365
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 190

Conread position: 132-527
Cow position:
Alignm length: 420
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 145

Conread position: 133-520
Cow position:
Alignm length: 413
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 150

Conread position: 135-379
Cow position:
Alignm length: 247
Alignm identity: 184
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 80, 60

Conread position: 135-527
Cow position:
Alignm length: 417
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 34

Conread position: 137-527
Cow position:
Alignm length: 416
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 130

Conread position: 138-484
Cow position:
Alignm length: 370
Alignm identity: 259
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 18, 145

Conread position: 143-356
Cow position:
Alignm length: 233
Alignm identity: 172
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 53, 113

Conread position: 144-300
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 136, 70

Conread position: 144-311
Cow position:
Alignm length: 173
Alignm identity: 132
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 71, 0

Conread position: 144-379
Cow position:
Alignm length: 238
Alignm identity: 184
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 12, 19

Conread position: 144-438
Cow position:
Alignm length: 303
Alignm identity: 215
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 73, 132

Conread position: 146-303
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 14

Conread position: 149-368
Cow position:
Alignm length: 228
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 152-310
Cow position:
Alignm length: 165
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 106

Conread position: 161-379
Cow position:
Alignm length: 223
Alignm identity: 160
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 47, 112

Conread position: 161-418
Cow position:
Alignm length: 283
Alignm identity: 199
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 54, 0

Conread position: 161-428
Cow position:
Alignm length: 291
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 121

Conread position: 162-308
Cow position:
Alignm length: 149
Alignm identity: 111
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 53, 100

Conread position: 162-329
Cow position:
Alignm length: 173
Alignm identity: 129
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 30, 154

Conread position: 162-371
Cow position:
Alignm length: 217
Alignm identity: 158
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 42, 81

Conread position: 162-379
Cow position:
Alignm length: 224
Alignm identity: 160
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 59, 112

Conread position: 162-492
Cow position:
Alignm length: 352
Alignm identity: 253
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 66, 57

Conread position: 162-501
Cow position:
Alignm length: 357
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 114

Conread position: 162-525
Cow position:
Alignm length: 380
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 112

Conread position: 162-525
Cow position:
Alignm length: 387
Alignm identity: 268
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 31, 119

Conread position: 162-526
Cow position:
Alignm length: 392
Alignm identity: 276
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 62, 118

Conread position: 162-527
Cow position:
Alignm length: 389
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 162-527
Cow position:
Alignm length: 391
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 154

Conread position: 163-356
Cow position:
Alignm length: 200
Alignm identity: 139
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 38, 173

Conread position: 163-362
Cow position:
Alignm length: 204
Alignm identity: 163
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 26, 36

Conread position: 163-503
Cow position:
Alignm length: 354
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 196

Conread position: 163-527
Cow position:
Alignm length: 384
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 56

Conread position: 163-527
Cow position:
Alignm length: 389
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 119

Conread position: 163-527
Cow position:
Alignm length: 378
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 95

Conread position: 164-338
Cow position:
Alignm length: 181
Alignm identity: 142
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 40, 114

Conread position: 164-343
Cow position:
Alignm length: 186
Alignm identity: 146
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 40, 114

Conread position: 167-527
Cow position:
Alignm length: 381
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 116

Conread position: 175-348
Cow position:
Alignm length: 186
Alignm identity: 142
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 30, 0

Show alignments to all cow chromosomes.