Cow genome map

Conread name: Thy1-THY010016G11

Conread position: 52-379
Cow position:
Alignm length: 342
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 48

Conread position: 52-506
Cow position:
Alignm length: 477
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 58

Conread position: 52-527
Cow position:
Alignm length: 494
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 63

Conread position: 54-525
Cow position:
Alignm length: 492
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 35

Conread position: 57-372
Cow position:
Alignm length: 335
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 231

Conread position: 57-510
Cow position:
Alignm length: 477
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 52

Conread position: 59-310
Cow position:
Alignm length: 252
Alignm identity: 181
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 36, 0

Conread position: 59-527
Cow position:
Alignm length: 488
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 54

Conread position: 60-527
Cow position:
Alignm length: 494
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 214

Conread position: 60-527
Cow position:
Alignm length: 500
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 28

Conread position: 70-296
Cow position:
Alignm length: 239
Alignm identity: 164
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 92, 9

Conread position: 71-372
Cow position:
Alignm length: 319
Alignm identity: 236
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 9, 137

Conread position: 75-474
Cow position:
Alignm length: 426
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 22

Conread position: 89-421
Cow position:
Alignm length: 358
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 7

Conread position: 91-527
Cow position:
Alignm length: 466
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 208

Conread position: 108-527
Cow position:
Alignm length: 444
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 174

Conread position: 126-525
Cow position:
Alignm length: 418
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 51

Conread position: 127-310
Cow position:
Alignm length: 196
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 71, 32

Conread position: 127-465
Cow position:
Alignm length: 357
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 69

Conread position: 127-527
Cow position:
Alignm length: 445
Alignm identity: 308
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 17, 151

Conread position: 128-266
Cow position:
Alignm length: 145
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 128-296
Cow position:
Alignm length: 178
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 93, 147

Conread position: 128-299
Cow position:
Alignm length: 178
Alignm identity: 131
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 28, 96

Conread position: 128-302
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 128-303
Cow position:
Alignm length: 182
Alignm identity: 136
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 59, 72

Conread position: 128-308
Cow position:
Alignm length: 184
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 25, 32

Conread position: 128-311
Cow position:
Alignm length: 195
Alignm identity: 145
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 91, 153

Conread position: 128-324
Cow position:
Alignm length: 204
Alignm identity: 157
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 41, 86

Conread position: 128-324
Cow position:
Alignm length: 201
Alignm identity: 155
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 28, 32

Conread position: 128-338
Cow position:
Alignm length: 220
Alignm identity: 172
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 88, 152

Conread position: 128-346
Cow position:
Alignm length: 231
Alignm identity: 177
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 28, 112

Conread position: 128-354
Cow position:
Alignm length: 229
Alignm identity: 170
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 144, 74

Conread position: 128-363
Cow position:
Alignm length: 238
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 128-372
Cow position:
Alignm length: 254
Alignm identity: 193
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 88, 199

Conread position: 128-372
Cow position:
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 124

Conread position: 128-379
Cow position:
Alignm length: 261
Alignm identity: 192
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 75, 0

Conread position: 128-379
Cow position:
Alignm length: 254
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 55

Conread position: 128-379
Cow position:
Alignm length: 261
Alignm identity: 187
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 75, 184

Conread position: 128-379
Cow position:
Alignm length: 256
Alignm identity: 192
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 28, 207

Conread position: 128-456
Cow position:
Alignm length: 351
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 32

Conread position: 128-481
Cow position:
Alignm length: 381
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 125

Conread position: 128-487
Cow position:
Alignm length: 381
Alignm identity: 251
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 13, 166

Conread position: 128-495
Cow position:
Alignm length: 383
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 47

Conread position: 128-511
Cow position:
Alignm length: 405
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 29

Conread position: 128-518
Cow position:
Alignm length: 407
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 32

Conread position: 128-524
Cow position:
Alignm length: 422
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 41

Conread position: 128-525
Cow position:
Alignm length: 420
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 40

Conread position: 128-527
Cow position:
Alignm length: 434
Alignm identity: 305
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 169, 52

Conread position: 128-527
Cow position:
Alignm length: 419
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 128-527
Cow position:
Alignm length: 416
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 166

Conread position: 128-527
Cow position:
Alignm length: 422
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 145

Conread position: 128-527
Cow position:
Alignm length: 430
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 214

Conread position: 128-527
Cow position:
Alignm length: 428
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 16

Conread position: 128-527
Cow position:
Alignm length: 427
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 36

Conread position: 128-527
Cow position:
Alignm length: 419
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 155

Conread position: 128-527
Cow position:
Alignm length: 420
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 203

Conread position: 129-255
Cow position:
Alignm length: 131
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 129-269
Cow position:
Alignm length: 141
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 129-296
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 27, 12

Conread position: 129-299
Cow position:
Alignm length: 180
Alignm identity: 139
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 27, 151

Conread position: 129-304
Cow position:
Alignm length: 180
Alignm identity: 141
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 24, 9

Conread position: 129-305
Cow position:
Alignm length: 184
Alignm identity: 141
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 27, 149

Conread position: 129-306
Cow position:
Alignm length: 184
Alignm identity: 147
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 27, 0

Conread position: 129-311
Cow position:
Alignm length: 185
Alignm identity: 149
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 27, 34

Conread position: 129-317
Cow position:
Alignm length: 201
Alignm identity: 149
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 27, 142

Conread position: 129-320
Cow position:
Alignm length: 195
Alignm identity: 152
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 27, 130

Conread position: 129-325
Cow position:
Alignm length: 197
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 129-338
Cow position:
Alignm length: 211
Alignm identity: 163
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 27, 65

Conread position: 129-347
Cow position:
Alignm length: 234
Alignm identity: 177
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 27, 128

Conread position: 129-354
Cow position:
Alignm length: 228
Alignm identity: 160
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 33, 94

Conread position: 129-362
Cow position:
Alignm length: 245
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 129-368
Cow position:
Alignm length: 255
Alignm identity: 179
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 34

Conread position: 129-372
Cow position:
Alignm length: 250
Alignm identity: 181
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 92, 148

Conread position: 129-372
Cow position:
Alignm length: 251
Alignm identity: 191
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 27, 39

Conread position: 129-373
Cow position:
Alignm length: 253
Alignm identity: 189
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 27, 34

Conread position: 129-378
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 74, 146

Conread position: 129-379
Cow position:
Alignm length: 257
Alignm identity: 189
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 92, 28

Conread position: 129-379
Cow position:
Alignm length: 258
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 34

Conread position: 129-379
Cow position:
Alignm length: 258
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 206

Conread position: 129-410
Cow position:
Alignm length: 297
Alignm identity: 221
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 8, 149

Conread position: 129-438
Cow position:
Alignm length: 322
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 67

Conread position: 129-443
Cow position:
Alignm length: 330
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 33

Conread position: 129-460
Cow position:
Alignm length: 350
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 301

Conread position: 129-475
Cow position:
Alignm length: 361
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 31

Conread position: 129-489
Cow position:
Alignm length: 391
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 155

Conread position: 129-495
Cow position:
Alignm length: 387
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 148

Conread position: 129-495
Cow position:
Alignm length: 387
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 149

Conread position: 129-510
Cow position:
Alignm length: 419
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 67

Conread position: 129-527
Cow position:
Alignm length: 421
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 150

Conread position: 129-527
Cow position:
Alignm length: 426
Alignm identity: 299
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 27, 34

Conread position: 129-527
Cow position:
Alignm length: 421
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 33

Conread position: 130-371
Cow position:
Alignm length: 249
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 35

Conread position: 130-373
Cow position:
Alignm length: 251
Alignm identity: 181
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 8, 39

Conread position: 130-379
Cow position:
Alignm length: 257
Alignm identity: 180
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 19, 8

Conread position: 130-437
Cow position:
Alignm length: 337
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 130-517
Cow position:
Alignm length: 419
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 38

Conread position: 130-527
Cow position:
Alignm length: 415
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 33

Conread position: 130-527
Cow position:
Alignm length: 407
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 169

Conread position: 130-527
Cow position:
Alignm length: 425
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 37

Conread position: 131-295
Cow position:
Alignm length: 166
Alignm identity: 130
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 35, 0

Conread position: 131-310
Cow position:
Alignm length: 182
Alignm identity: 138
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 84, 142

Conread position: 131-372
Cow position:
Alignm length: 249
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 30

Conread position: 131-373
Cow position:
Alignm length: 255
Alignm identity: 187
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 25, 37

Conread position: 131-373
Cow position:
Alignm length: 244
Alignm identity: 178
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 129, 93

Conread position: 131-501
Cow position:
Alignm length: 392
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 114

Conread position: 131-527
Cow position:
Alignm length: 413
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 142

Conread position: 132-300
Cow position:
Alignm length: 169
Alignm identity: 128
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 82, 0

Conread position: 132-367
Cow position:
Alignm length: 245
Alignm identity: 167
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 74, 138

Conread position: 132-379
Cow position:
Alignm length: 258
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 31

Conread position: 133-307
Cow position:
Alignm length: 181
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 23, 0

Conread position: 133-527
Cow position:
Alignm length: 418
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 239

Conread position: 135-369
Cow position:
Alignm length: 248
Alignm identity: 192
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 22, 150

Conread position: 137-498
Cow position:
Alignm length: 385
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 205

Conread position: 138-525
Cow position:
Alignm length: 414
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 142

Conread position: 138-527
Cow position:
Alignm length: 421
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 56

Conread position: 140-373
Cow position:
Alignm length: 243
Alignm identity: 184
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 63, 27

Conread position: 141-325
Cow position:
Alignm length: 196
Alignm identity: 154
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 15, 22

Conread position: 142-298
Cow position:
Alignm length: 161
Alignm identity: 128
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 62, 14

Conread position: 142-527
Cow position:
Alignm length: 415
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 9

Conread position: 143-329
Cow position:
Alignm length: 193
Alignm identity: 152
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 13, 25

Conread position: 143-468
Cow position:
Alignm length: 345
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 128

Conread position: 144-372
Cow position:
Alignm length: 240
Alignm identity: 180
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 59, 136

Conread position: 144-405
Cow position:
Alignm length: 286
Alignm identity: 215
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 12, 143

Conread position: 146-527
Cow position:
Alignm length: 417
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 13

Conread position: 147-379
Cow position:
Alignm length: 240
Alignm identity: 183
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 20, 123

Conread position: 147-527
Cow position:
Alignm length: 402
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 10

Conread position: 148-311
Cow position:
Alignm length: 173
Alignm identity: 128
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 75, 135

Conread position: 149-527
Cow position:
Alignm length: 401
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 115

Conread position: 151-310
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 64, 126

Conread position: 161-520
Cow position:
Alignm length: 383
Alignm identity: 267
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 120, 43

Conread position: 162-372
Cow position:
Alignm length: 216
Alignm identity: 156
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 51, 95

Conread position: 162-372
Cow position:
Alignm length: 219
Alignm identity: 160
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 24, 58

Conread position: 162-419
Cow position:
Alignm length: 273
Alignm identity: 200
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 31, 133

Conread position: 162-495
Cow position:
Alignm length: 363
Alignm identity: 238
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 62, 117

Conread position: 162-517
Cow position:
Alignm length: 374
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 110

Conread position: 162-520
Cow position:
Alignm length: 384
Alignm identity: 262
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 51, 113

Conread position: 162-527
Cow position:
Alignm length: 392
Alignm identity: 257
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 55, 114

Conread position: 162-527
Cow position:
Alignm length: 395
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 166

Conread position: 163-526
Cow position:
Alignm length: 386
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 117

Conread position: 164-368
Cow position:
Alignm length: 215
Alignm identity: 163
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 22, 117

Conread position: 166-459
Cow position:
Alignm length: 309
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 110

Conread position: 169-515
Cow position:
Alignm length: 377
Alignm identity: 256
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 52, 108

Show alignments to all cow chromosomes.