Cow genome map

Conread name: Thy1-THY010016G11

Conread position: 43-464
Cow position:
Alignm length: 435
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 17

Conread position: 54-379
Cow position:
Alignm length: 344
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 33

Conread position: 55-249
Cow position:
Alignm length: 210
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 68, 33

Conread position: 59-300
Cow position:
Alignm length: 264
Alignm identity: 188
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 70, 29

Conread position: 60-282
Cow position:
Alignm length: 235
Alignm identity: 173
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 63, 34

Conread position: 60-379
Cow position:
Alignm length: 334
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 29

Conread position: 60-417
Cow position:
Alignm length: 370
Alignm identity: 260
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 156, 32

Conread position: 60-525
Cow position:
Alignm length: 491
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 35

Conread position: 60-527
Cow position:
Alignm length: 495
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 28

Conread position: 62-314
Cow position:
Alignm length: 260
Alignm identity: 178
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 61, 37

Conread position: 62-379
Cow position:
Alignm length: 325
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 32

Conread position: 63-444
Cow position:
Alignm length: 407
Alignm identity: 262
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 149, 198

Conread position: 76-526
Cow position:
Alignm length: 465
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 13

Conread position: 79-325
Cow position:
Alignm length: 260
Alignm identity: 186
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 20

Conread position: 83-307
Cow position:
Alignm length: 239
Alignm identity: 183
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 14, 192

Conread position: 88-365
Cow position:
Alignm length: 299
Alignm identity: 225
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 34, 205

Conread position: 95-308
Cow position:
Alignm length: 229
Alignm identity: 174
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 28, 62

Conread position: 95-363
Cow position:
Alignm length: 282
Alignm identity: 192
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 28, 50

Conread position: 95-525
Cow position:
Alignm length: 453
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 79

Conread position: 99-326
Cow position:
Alignm length: 237
Alignm identity: 164
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 57, 61

Conread position: 115-308
Cow position:
Alignm length: 199
Alignm identity: 146
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 88, 42

Conread position: 115-523
Cow position:
Alignm length: 437
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 46

Conread position: 120-527
Cow position:
Alignm length: 427
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 301

Conread position: 126-353
Cow position:
Alignm length: 237
Alignm identity: 182
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 95, 159

Conread position: 127-512
Cow position:
Alignm length: 405
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 127-525
Cow position:
Alignm length: 418
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 150

Conread position: 128-268
Cow position:
Alignm length: 150
Alignm identity: 113
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 128-293
Cow position:
Alignm length: 168
Alignm identity: 127
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 61, 70

Conread position: 128-294
Cow position:
Alignm length: 175
Alignm identity: 127
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 28, 40

Conread position: 128-295
Cow position:
Alignm length: 176
Alignm identity: 129
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 87, 23

Conread position: 128-298
Cow position:
Alignm length: 177
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 17

Conread position: 128-302
Cow position:
Alignm length: 181
Alignm identity: 137
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 28, 0

Conread position: 128-304
Cow position:
Alignm length: 183
Alignm identity: 139
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 28, 150

Conread position: 128-306
Cow position:
Alignm length: 190
Alignm identity: 146
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 16, 41

Conread position: 128-310
Cow position:
Alignm length: 189
Alignm identity: 142
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 28, 69

Conread position: 128-311
Cow position:
Alignm length: 189
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 110

Conread position: 128-311
Cow position:
Alignm length: 186
Alignm identity: 138
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 14, 26

Conread position: 128-311
Cow position:
Alignm length: 193
Alignm identity: 146
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 87, 0

Conread position: 128-311
Cow position:
Alignm length: 193
Alignm identity: 139
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 37, 155

Conread position: 128-324
Cow position:
Alignm length: 212
Alignm identity: 152
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 88, 0

Conread position: 128-324
Cow position:
Alignm length: 207
Alignm identity: 163
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 28, 153

Conread position: 128-328
Cow position:
Alignm length: 210
Alignm identity: 165
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 87, 149

Conread position: 128-337
Cow position:
Alignm length: 221
Alignm identity: 168
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 90, 34

Conread position: 128-350
Cow position:
Alignm length: 232
Alignm identity: 181
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 29, 151

Conread position: 128-364
Cow position:
Alignm length: 243
Alignm identity: 181
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 87, 149

Conread position: 128-372
Cow position:
Alignm length: 260
Alignm identity: 180
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 36, 25

Conread position: 128-372
Cow position:
Alignm length: 247
Alignm identity: 182
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 72, 16

Conread position: 128-373
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 87, 64

Conread position: 128-379
Cow position:
Alignm length: 263
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 235

Conread position: 128-408
Cow position:
Alignm length: 282
Alignm identity: 200
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 149, 81

Conread position: 128-414
Cow position:
Alignm length: 303
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 32

Conread position: 128-439
Cow position:
Alignm length: 322
Alignm identity: 228
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 24, 40

Conread position: 128-456
Cow position:
Alignm length: 346
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 33

Conread position: 128-463
Cow position:
Alignm length: 351
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 104

Conread position: 128-469
Cow position:
Alignm length: 352
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 149

Conread position: 128-474
Cow position:
Alignm length: 370
Alignm identity: 246
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 75, 117

Conread position: 128-498
Cow position:
Alignm length: 391
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 153

Conread position: 128-500
Cow position:
Alignm length: 407
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 29

Conread position: 128-515
Cow position:
Alignm length: 406
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 128-520
Cow position:
Alignm length: 413
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 40

Conread position: 128-527
Cow position:
Alignm length: 426
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 137

Conread position: 128-527
Cow position:
Alignm length: 413
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 61

Conread position: 128-527
Cow position:
Alignm length: 440
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 145

Conread position: 128-527
Cow position:
Alignm length: 422
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 153

Conread position: 129-276
Cow position:
Alignm length: 156
Alignm identity: 122
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 27, 115

Conread position: 129-278
Cow position:
Alignm length: 159
Alignm identity: 128
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 27, 151

Conread position: 129-295
Cow position:
Alignm length: 175
Alignm identity: 136
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 27, 150

Conread position: 129-299
Cow position:
Alignm length: 174
Alignm identity: 139
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 27, 39

Conread position: 129-301
Cow position:
Alignm length: 174
Alignm identity: 131
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 149, 64

Conread position: 129-306
Cow position:
Alignm length: 183
Alignm identity: 138
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 27, 34

Conread position: 129-311
Cow position:
Alignm length: 193
Alignm identity: 141
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 129-316
Cow position:
Alignm length: 194
Alignm identity: 143
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 77, 18

Conread position: 129-337
Cow position:
Alignm length: 215
Alignm identity: 155
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 129-367
Cow position:
Alignm length: 245
Alignm identity: 179
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 89, 52

Conread position: 129-371
Cow position:
Alignm length: 249
Alignm identity: 183
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 15, 35

Conread position: 129-372
Cow position:
Alignm length: 247
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 84

Conread position: 129-379
Cow position:
Alignm length: 260
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 152

Conread position: 129-412
Cow position:
Alignm length: 292
Alignm identity: 203
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 27, 0

Conread position: 129-444
Cow position:
Alignm length: 340
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 153

Conread position: 129-450
Cow position:
Alignm length: 338
Alignm identity: 243
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 244, 75

Conread position: 129-450
Cow position:
Alignm length: 366
Alignm identity: 261
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 27, 37

Conread position: 129-452
Cow position:
Alignm length: 346
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 151

Conread position: 129-452
Cow position:
Alignm length: 337
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 11

Conread position: 129-475
Cow position:
Alignm length: 375
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 39

Conread position: 129-499
Cow position:
Alignm length: 388
Alignm identity: 247
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 92, 176

Conread position: 129-519
Cow position:
Alignm length: 413
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 128

Conread position: 129-524
Cow position:
Alignm length: 417
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 126

Conread position: 129-527
Cow position:
Alignm length: 425
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 31

Conread position: 129-527
Cow position:
Alignm length: 425
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 11

Conread position: 129-527
Cow position:
Alignm length: 422
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 9

Conread position: 129-527
Cow position:
Alignm length: 416
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 69

Conread position: 129-527
Cow position:
Alignm length: 417
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 148

Conread position: 129-527
Cow position:
Alignm length: 410
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 31

Conread position: 130-312
Cow position:
Alignm length: 187
Alignm identity: 139
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 84, 0

Conread position: 130-481
Cow position:
Alignm length: 377
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 155

Conread position: 130-503
Cow position:
Alignm length: 392
Alignm identity: 264
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 91, 29

Conread position: 130-527
Cow position:
Alignm length: 426
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 26

Conread position: 131-299
Cow position:
Alignm length: 179
Alignm identity: 140
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 25, 29

Conread position: 131-310
Cow position:
Alignm length: 188
Alignm identity: 140
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 75, 0

Conread position: 131-452
Cow position:
Alignm length: 346
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 195

Conread position: 131-479
Cow position:
Alignm length: 374
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 152

Conread position: 131-527
Cow position:
Alignm length: 409
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 65

Conread position: 132-481
Cow position:
Alignm length: 382
Alignm identity: 271
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 71, 25

Conread position: 132-487
Cow position:
Alignm length: 377
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 57

Conread position: 135-527
Cow position:
Alignm length: 424
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 131

Conread position: 142-372
Cow position:
Alignm length: 240
Alignm identity: 184
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 61, 134

Conread position: 143-302
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 143-379
Cow position:
Alignm length: 259
Alignm identity: 188
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 13, 0

Conread position: 143-527
Cow position:
Alignm length: 406
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 138

Conread position: 144-455
Cow position:
Alignm length: 337
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 140

Conread position: 145-302
Cow position:
Alignm length: 168
Alignm identity: 127
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 58, 136

Conread position: 145-468
Cow position:
Alignm length: 341
Alignm identity: 232
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 71, 132

Conread position: 146-524
Cow position:
Alignm length: 401
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 136

Conread position: 162-310
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 162-353
Cow position:
Alignm length: 199
Alignm identity: 144
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 64, 81

Conread position: 162-379
Cow position:
Alignm length: 220
Alignm identity: 163
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 44, 52

Conread position: 162-460
Cow position:
Alignm length: 314
Alignm identity: 224
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 59, 143

Conread position: 162-512
Cow position:
Alignm length: 372
Alignm identity: 262
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 53, 36

Conread position: 162-525
Cow position:
Alignm length: 381
Alignm identity: 266
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 70, 44

Conread position: 162-527
Cow position:
Alignm length: 397
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 118

Conread position: 162-527
Cow position:
Alignm length: 392
Alignm identity: 269
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 41, 105

Conread position: 162-527
Cow position:
Alignm length: 391
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 119

Conread position: 163-343
Cow position:
Alignm length: 188
Alignm identity: 141
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 32, 140

Conread position: 163-372
Cow position:
Alignm length: 220
Alignm identity: 170
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 40, 83

Conread position: 163-527
Cow position:
Alignm length: 380
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 164-374
Cow position:
Alignm length: 215
Alignm identity: 165
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 49, 210

Conread position: 165-527
Cow position:
Alignm length: 379
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 73

Conread position: 168-469
Cow position:
Alignm length: 314
Alignm identity: 228
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 53, 99

Conread position: 174-422
Cow position:
Alignm length: 260
Alignm identity: 181
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 149

Show alignments to all cow chromosomes.