Cow genome map

Conread name: Thy1-THY010016G11

Conread position: 41-466
Cow position:
Alignm length: 453
Alignm identity: 302
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 23, 14

Conread position: 42-527
Cow position:
Alignm length: 502
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 49-527
Cow position:
Alignm length: 493
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 39

Conread position: 52-324
Cow position:
Alignm length: 293
Alignm identity: 217
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 33, 239

Conread position: 52-342
Cow position:
Alignm length: 303
Alignm identity: 216
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 50, 36

Conread position: 52-351
Cow position:
Alignm length: 307
Alignm identity: 211
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 41, 48

Conread position: 57-290
Cow position:
Alignm length: 237
Alignm identity: 168
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 139, 27

Conread position: 57-527
Cow position:
Alignm length: 499
Alignm identity: 336
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 164, 40

Conread position: 59-289
Cow position:
Alignm length: 233
Alignm identity: 161
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 46, 103

Conread position: 60-308
Cow position:
Alignm length: 265
Alignm identity: 197
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 63, 148

Conread position: 61-300
Cow position:
Alignm length: 243
Alignm identity: 174
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 103, 27

Conread position: 61-475
Cow position:
Alignm length: 440
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 34

Conread position: 69-300
Cow position:
Alignm length: 237
Alignm identity: 164
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 117, 11

Conread position: 70-527
Cow position:
Alignm length: 486
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 217

Conread position: 74-525
Cow position:
Alignm length: 469
Alignm identity: 303
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 8, 15

Conread position: 78-527
Cow position:
Alignm length: 475
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 11

Conread position: 83-281
Cow position:
Alignm length: 207
Alignm identity: 152
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 10, 84

Conread position: 89-379
Cow position:
Alignm length: 304
Alignm identity: 203
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 12, 242

Conread position: 102-293
Cow position:
Alignm length: 201
Alignm identity: 145
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 104-344
Cow position:
Alignm length: 251
Alignm identity: 181
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 52, 154

Conread position: 108-372
Cow position:
Alignm length: 272
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 9

Conread position: 118-293
Cow position:
Alignm length: 188
Alignm identity: 144
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 35, 60

Conread position: 127-527
Cow position:
Alignm length: 418
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 149

Conread position: 128-285
Cow position:
Alignm length: 160
Alignm identity: 123
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 87, 29

Conread position: 128-286
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 28, 147

Conread position: 128-290
Cow position:
Alignm length: 171
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 128

Conread position: 128-291
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 128-300
Cow position:
Alignm length: 176
Alignm identity: 134
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 61, 146

Conread position: 128-303
Cow position:
Alignm length: 179
Alignm identity: 134
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 69, 61

Conread position: 128-303
Cow position:
Alignm length: 190
Alignm identity: 143
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 28, 158

Conread position: 128-304
Cow position:
Alignm length: 180
Alignm identity: 141
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 25, 32

Conread position: 128-308
Cow position:
Alignm length: 190
Alignm identity: 144
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 88, 0

Conread position: 128-310
Cow position:
Alignm length: 184
Alignm identity: 140
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 176, 108

Conread position: 128-312
Cow position:
Alignm length: 194
Alignm identity: 145
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 57, 153

Conread position: 128-324
Cow position:
Alignm length: 207
Alignm identity: 151
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 21, 153

Conread position: 128-327
Cow position:
Alignm length: 207
Alignm identity: 152
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 91, 151

Conread position: 128-339
Cow position:
Alignm length: 221
Alignm identity: 166
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 90, 120

Conread position: 128-346
Cow position:
Alignm length: 228
Alignm identity: 170
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 78, 39

Conread position: 128-351
Cow position:
Alignm length: 236
Alignm identity: 176
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 75, 185

Conread position: 128-353
Cow position:
Alignm length: 227
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 61

Conread position: 128-359
Cow position:
Alignm length: 250
Alignm identity: 188
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 28, 158

Conread position: 128-368
Cow position:
Alignm length: 241
Alignm identity: 170
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 128-372
Cow position:
Alignm length: 252
Alignm identity: 190
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 81, 149

Conread position: 128-372
Cow position:
Alignm length: 264
Alignm identity: 195
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 28, 126

Conread position: 128-372
Cow position:
Alignm length: 251
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 146

Conread position: 128-372
Cow position:
Alignm length: 246
Alignm identity: 177
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 151, 139

Conread position: 128-373
Cow position:
Alignm length: 256
Alignm identity: 193
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 28, 148

Conread position: 128-379
Cow position:
Alignm length: 262
Alignm identity: 196
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 28, 35

Conread position: 128-383
Cow position:
Alignm length: 263
Alignm identity: 187
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 68, 127

Conread position: 128-456
Cow position:
Alignm length: 338
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 147

Conread position: 128-464
Cow position:
Alignm length: 358
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 184

Conread position: 128-471
Cow position:
Alignm length: 349
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 35

Conread position: 128-486
Cow position:
Alignm length: 384
Alignm identity: 256
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 28, 32

Conread position: 128-487
Cow position:
Alignm length: 390
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 29

Conread position: 128-507
Cow position:
Alignm length: 397
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 96

Conread position: 128-513
Cow position:
Alignm length: 401
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 11

Conread position: 128-524
Cow position:
Alignm length: 421
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 17

Conread position: 128-525
Cow position:
Alignm length: 420
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 182

Conread position: 128-525
Cow position:
Alignm length: 415
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 75

Conread position: 128-525
Cow position:
Alignm length: 420
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 151

Conread position: 128-526
Cow position:
Alignm length: 419
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 151

Conread position: 128-526
Cow position:
Alignm length: 422
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 16

Conread position: 128-527
Cow position:
Alignm length: 421
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 32

Conread position: 128-527
Cow position:
Alignm length: 423
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 151

Conread position: 128-527
Cow position:
Alignm length: 422
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 99

Conread position: 128-527
Cow position:
Alignm length: 422
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 32

Conread position: 128-527
Cow position:
Alignm length: 424
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 153

Conread position: 128-527
Cow position:
Alignm length: 433
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 153

Conread position: 128-527
Cow position:
Alignm length: 431
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 179

Conread position: 128-527
Cow position:
Alignm length: 422
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 153

Conread position: 128-527
Cow position:
Alignm length: 425
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 69

Conread position: 129-284
Cow position:
Alignm length: 160
Alignm identity: 126
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 27, 146

Conread position: 129-292
Cow position:
Alignm length: 166
Alignm identity: 130
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 27, 34

Conread position: 129-295
Cow position:
Alignm length: 173
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 149

Conread position: 129-298
Cow position:
Alignm length: 170
Alignm identity: 130
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 27, 0

Conread position: 129-300
Cow position:
Alignm length: 178
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 34

Conread position: 129-301
Cow position:
Alignm length: 182
Alignm identity: 134
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 64, 152

Conread position: 129-302
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 27, 155

Conread position: 129-306
Cow position:
Alignm length: 189
Alignm identity: 141
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 27, 39

Conread position: 129-308
Cow position:
Alignm length: 189
Alignm identity: 143
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 80, 152

Conread position: 129-310
Cow position:
Alignm length: 186
Alignm identity: 149
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 27, 70

Conread position: 129-311
Cow position:
Alignm length: 192
Alignm identity: 138
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 66, 15

Conread position: 129-311
Cow position:
Alignm length: 194
Alignm identity: 143
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 27, 154

Conread position: 129-311
Cow position:
Alignm length: 192
Alignm identity: 149
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 27, 16

Conread position: 129-314
Cow position:
Alignm length: 202
Alignm identity: 149
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 27, 173

Conread position: 129-339
Cow position:
Alignm length: 220
Alignm identity: 165
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 27, 151

Conread position: 129-340
Cow position:
Alignm length: 225
Alignm identity: 168
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 27, 195

Conread position: 129-345
Cow position:
Alignm length: 225
Alignm identity: 170
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 85, 27

Conread position: 129-372
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 60, 129

Conread position: 129-372
Cow position:
Alignm length: 255
Alignm identity: 185
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 22, 44

Conread position: 129-372
Cow position:
Alignm length: 253
Alignm identity: 194
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 57, 32

Conread position: 129-382
Cow position:
Alignm length: 268
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 201

Conread position: 129-388
Cow position:
Alignm length: 272
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 18

Conread position: 129-422
Cow position:
Alignm length: 316
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 129-524
Cow position:
Alignm length: 434
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 12

Conread position: 129-525
Cow position:
Alignm length: 425
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 129-527
Cow position:
Alignm length: 416
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 27

Conread position: 129-527
Cow position:
Alignm length: 425
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 12

Conread position: 129-527
Cow position:
Alignm length: 425
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 46

Conread position: 130-294
Cow position:
Alignm length: 168
Alignm identity: 127
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 91, 143

Conread position: 130-294
Cow position:
Alignm length: 170
Alignm identity: 137
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 26, 147

Conread position: 130-297
Cow position:
Alignm length: 175
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 33, 17

Conread position: 130-306
Cow position:
Alignm length: 186
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 29

Conread position: 130-327
Cow position:
Alignm length: 199
Alignm identity: 137
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 85, 143

Conread position: 130-329
Cow position:
Alignm length: 210
Alignm identity: 157
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 66, 151

Conread position: 130-370
Cow position:
Alignm length: 244
Alignm identity: 184
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 26, 33

Conread position: 130-372
Cow position:
Alignm length: 253
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 146

Conread position: 130-372
Cow position:
Alignm length: 250
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 33

Conread position: 130-443
Cow position:
Alignm length: 338
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 33

Conread position: 130-487
Cow position:
Alignm length: 377
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 130-527
Cow position:
Alignm length: 423
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 8

Conread position: 130-527
Cow position:
Alignm length: 421
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 30

Conread position: 131-279
Cow position:
Alignm length: 155
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 25, 148

Conread position: 131-349
Cow position:
Alignm length: 229
Alignm identity: 172
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 25, 147

Conread position: 131-372
Cow position:
Alignm length: 248
Alignm identity: 187
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 35, 72

Conread position: 131-377
Cow position:
Alignm length: 249
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 144

Conread position: 131-382
Cow position:
Alignm length: 262
Alignm identity: 180
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 72, 160

Conread position: 131-387
Cow position:
Alignm length: 263
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 124

Conread position: 131-428
Cow position:
Alignm length: 317
Alignm identity: 233
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 25, 32

Conread position: 131-443
Cow position:
Alignm length: 332
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 140

Conread position: 131-459
Cow position:
Alignm length: 348
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 32

Conread position: 131-527
Cow position:
Alignm length: 415
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 147

Conread position: 132-308
Cow position:
Alignm length: 187
Alignm identity: 150
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 24, 58

Conread position: 132-314
Cow position:
Alignm length: 186
Alignm identity: 141
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 71, 93

Conread position: 132-527
Cow position:
Alignm length: 414
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 132

Conread position: 138-463
Cow position:
Alignm length: 349
Alignm identity: 233
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 30, 0

Conread position: 140-302
Cow position:
Alignm length: 168
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 147-527
Cow position:
Alignm length: 400
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 127

Conread position: 148-527
Cow position:
Alignm length: 414
Alignm identity: 293
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 8, 21

Conread position: 162-515
Cow position:
Alignm length: 371
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 115

Conread position: 162-525
Cow position:
Alignm length: 392
Alignm identity: 266
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 51, 155

Conread position: 162-527
Cow position:
Alignm length: 396
Alignm identity: 273
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 59, 12

Conread position: 162-527
Cow position:
Alignm length: 380
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 114

Conread position: 162-527
Cow position:
Alignm length: 380
Alignm identity: 272
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 211, 59

Conread position: 163-379
Cow position:
Alignm length: 222
Alignm identity: 169
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 135, 38

Conread position: 163-474
Cow position:
Alignm length: 335
Alignm identity: 236
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 53, 95

Conread position: 163-500
Cow position:
Alignm length: 360
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 99

Conread position: 164-372
Cow position:
Alignm length: 212
Alignm identity: 156
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 60, 0

Conread position: 167-329
Cow position:
Alignm length: 173
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 29, 112

Show alignments to all cow chromosomes.