Cow genome map

Conread name: Thy1-THY010016G11

Conread position: 43-527
Cow position: chrX:22813111-22812593 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 46

Conread position: 47-310
Cow position: chrX:38935319-38935041 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 198
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 74, 41

Conread position: 49-310
Cow position: chrX:34543820-34543547 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 51

Conread position: 52-490
Cow position: chrX:15485602-15486057 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 77

Conread position: 52-509
Cow position: chrX:23563758-23564248 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 241

Conread position: 52-527
Cow position: chrX:31729475-31728989 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 114

Conread position: 54-317
Cow position: chrX:6278467-6278753 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 212
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 69, 38

Conread position: 54-379
Cow position: chrX:9226962-9227293 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 235
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 44, 56

Conread position: 57-324
Cow position: chrX:48536652-48536920 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 203
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 98, 30

Conread position: 57-358
Cow position: chrX:46722718-46723029 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 53

Conread position: 57-428
Cow position: chrX:5118492-5118853 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 273
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 220, 21

Conread position: 59-432
Cow position: chrX:11717757-11718152 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 228

Conread position: 60-291
Cow position: chrX:23091895-23091660 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 178
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 19, 37

Conread position: 60-292
Cow position: chrX:12979809-12980053 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 63, 34

Conread position: 60-308
Cow position: chrX:27680423-27680165 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 196
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 63, 34

Conread position: 60-310
Cow position: chrX:9954164-9953901 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 190
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 63, 28

Conread position: 60-340
Cow position: chrX:17541985-17541694 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 211
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 63, 29

Conread position: 60-368
Cow position: chrX:19015462-19015144 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 169

Conread position: 60-379
Cow position: chrX:31442804-31443129 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 34

Conread position: 60-451
Cow position: chrX:32310130-32309701 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 290
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 77, 34

Conread position: 60-521
Cow position: chrX:878355-878833 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 34

Conread position: 60-525
Cow position: chrX:26625646-26626162 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 62-363
Cow position: chrX:22482674-22482982 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 27

Conread position: 69-310
Cow position: chrX:33493780-33493535 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 24, 10

Conread position: 70-379
Cow position: chrX:25713800-25713500 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 221
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 31, 10

Conread position: 72-299
Cow position: chrX:1728409-1728646 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 104

Conread position: 75-310
Cow position: chrX:38642264-38642020 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 29, 36

Conread position: 78-379
Cow position: chrX:23061447-23061145 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 115

Conread position: 80-446
Cow position: chrX:39701223-39700825 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 273
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 36, 81

Conread position: 83-527
Cow position: chrX:35268872-35268426 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 45

Conread position: 84-355
Cow position: chrX:48227620-48227900 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 202
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 60, 30

Conread position: 84-500
Cow position: chrX:10437662-10438093 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 249

Conread position: 84-525
Cow position: chrX:11082617-11083077 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 85

Conread position: 89-527
Cow position: chrX:42994614-42994154 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 163

Conread position: 95-413
Cow position: chrX:19690213-19689860 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 198

Conread position: 110-311
Cow position: chrX:21663285-21663068 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 12, 170

Conread position: 113-341
Cow position: chrX:10095990-10095755 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 71, 16

Conread position: 114-527
Cow position: chrX:26531924-26531490 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 155

Conread position: 115-526
Cow position: chrX:25338139-25337733 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 44

Conread position: 119-377
Cow position: chrX:42855369-42855104 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 9

Conread position: 126-310
Cow position: chrX:42499075-42499269 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 14, 36

Conread position: 127-527
Cow position: chrX:15596992-15596583 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 157

Conread position: 128-268
Cow position: chrX:12405436-12405575 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 100

Conread position: 128-277
Cow position: chrX:842107-841952 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 20, 151

Conread position: 128-277
Cow position: chrX:46587767-46587611 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 152

Conread position: 128-279
Cow position: chrX:29542272-29542427 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 76, 149

Conread position: 128-280
Cow position: chrX:27174943-27174785 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 28, 0

Conread position: 128-287
Cow position: chrX:29120993-29120841 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 35

Conread position: 128-290
Cow position: chrX:29601883-29602053 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 25, 32

Conread position: 128-292
Cow position: chrX:1503285-1503117 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 28, 35

Conread position: 128-295
Cow position: chrX:29509494-29509669 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 28, 0

Conread position: 128-297
Cow position: chrX:11856376-11856202 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 28, 135

Conread position: 128-297
Cow position: chrX:48684278-48684450 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 128-299
Cow position: chrX:13265676-13265849 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 67, 0

Conread position: 128-300
Cow position: chrX:35542842-35542661 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 36, 28

Conread position: 128-301
Cow position: chrX:2648406-2648581 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 8, 32

Conread position: 128-301
Cow position: chrX:37910393-37910222 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 28, 35

Conread position: 128-302
Cow position: chrX:13382277-13382092 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 128-302
Cow position: chrX:30962926-30963104 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 28, 148

Conread position: 128-303
Cow position: chrX:9201497-9201314 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 61, 153

Conread position: 128-304
Cow position: chrX:6640077-6639890 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 148
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 28, 0

Conread position: 128-304
Cow position: chrX:7513461-7513282 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 87, 151

Conread position: 128-308
Cow position: chrX:41167017-41167202 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 149
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 30, 150

Conread position: 128-310
Cow position: chrX:619057-619248 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 36, 28

Conread position: 128-310
Cow position: chrX:43049296-43049102 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 128-310
Cow position: chrX:44053205-44053018 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 28, 35

Conread position: 128-311
Cow position: chrX:9416746-9416934 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 150
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 36, 28

Conread position: 128-311
Cow position: chrX:9635238-9635422 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 89, 23

Conread position: 128-311
Cow position: chrX:39938576-39938758 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 69, 32

Conread position: 128-312
Cow position: chrX:35284567-35284375 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 28, 0

Conread position: 128-312
Cow position: chrX:40035496-40035693 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 69, 39

Conread position: 128-322
Cow position: chrX:23497721-23497915 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 163
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 28, 32

Conread position: 128-324
Cow position: chrX:28878222-28878416 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 158
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 28, 48

Conread position: 128-325
Cow position: chrX:25815959-25816151 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 155
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 87, 29

Conread position: 128-337
Cow position: chrX:17725921-17725711 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 67, 149

Conread position: 128-347
Cow position: chrX:30922133-30921908 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 128-348
Cow position: chrX:8925648-8925428 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 87, 193

Conread position: 128-350
Cow position: chrX:9997388-9997611 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 148

Conread position: 128-369
Cow position: chrX:1176032-1176273 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 75, 153

Conread position: 128-370
Cow position: chrX:6234505-6234735 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 188
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 28, 147

Conread position: 128-372
Cow position: chrX:5638221-5638470 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 198
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 28, 12

Conread position: 128-372
Cow position: chrX:20710022-20709773 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 185
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 28, 35

Conread position: 128-372
Cow position: chrX:31436425-31436178 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 128-372
Cow position: chrX:38006817-38007070 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 151

Conread position: 128-373
Cow position: chrX:45414353-45414603 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 148

Conread position: 128-377
Cow position: chrX:40557734-40557983 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 144

Conread position: 128-379
Cow position: chrX:15545841-15545588 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 149

Conread position: 128-379
Cow position: chrX:44396965-44396711 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 181
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 73, 29

Conread position: 128-382
Cow position: chrX:41403926-41403649 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 202
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 28, 156

Conread position: 128-382
Cow position: chrX:41410474-41410197 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 202
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 28, 156

Conread position: 128-382
Cow position: chrX:43527457-43527190 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 202
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 27, 156

Conread position: 128-388
Cow position: chrX:14924948-14924682 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 131

Conread position: 128-432
Cow position: chrX:11844297-11844612 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 108

Conread position: 128-436
Cow position: chrX:33855286-33855618 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 237
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 87, 149

Conread position: 128-436
Cow position: chrX:41743859-41743535 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 149

Conread position: 128-449
Cow position: chrX:34401945-34401607 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 28

Conread position: 128-451
Cow position: chrX:32978310-32978650 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 18

Conread position: 128-460
Cow position: chrX:30543341-30543689 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 254
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 90, 24

Conread position: 128-469
Cow position: chrX:42247239-42247592 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 24

Conread position: 128-481
Cow position: chrX:42171349-42171722 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 153

Conread position: 128-482
Cow position: chrX:1616097-1616481 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 32

Conread position: 128-495
Cow position: chrX:5017467-5017841 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 36

Conread position: 128-495
Cow position: chrX:37232360-37231974 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 29

Conread position: 128-495
Cow position: chrX:38439425-38439039 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 38

Conread position: 128-504
Cow position: chrX:21665645-21666037 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 151

Conread position: 128-511
Cow position: chrX:24201134-24200742 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 281
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 17, 128

Conread position: 128-524
Cow position: chrX:13785416-13785849 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 153

Conread position: 128-524
Cow position: chrX:14884011-14884428 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 151

Conread position: 128-524
Cow position: chrX:28111454-28111029 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 302

Conread position: 128-524
Cow position: chrX:30162944-30162544 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 150

Conread position: 128-525
Cow position: chrX:6544203-6543790 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 355

Conread position: 128-525
Cow position: chrX:7806329-7805909 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 129

Conread position: 128-525
Cow position: chrX:11656039-11655610 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 128-525
Cow position: chrX:20339942-20340357 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 45

Conread position: 128-527
Cow position: chrX:5872268-5871848 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 157

Conread position: 128-527
Cow position: chrX:7571850-7571434 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 29

Conread position: 128-527
Cow position: chrX:10412039-10412440 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 10

Conread position: 128-527
Cow position: chrX:12309438-12309855 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 53

Conread position: 128-527
Cow position: chrX:13647838-13648253 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 128-527
Cow position: chrX:17498032-17497627 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 67

Conread position: 128-527
Cow position: chrX:31260680-31261105 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 22

Conread position: 128-527
Cow position: chrX:34441504-34441916 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 130

Conread position: 128-527
Cow position: chrX:34532468-34532062 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 28

Conread position: 128-527
Cow position: chrX:35273302-35272898 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 10

Conread position: 128-527
Cow position: chrX:35288603-35288185 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 35

Conread position: 128-527
Cow position: chrX:35387955-35388376 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 32

Conread position: 128-527
Cow position: chrX:35681288-35680876 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 74

Conread position: 128-527
Cow position: chrX:37072355-37071931 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 104

Conread position: 128-527
Cow position: chrX:40269435-40269007 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 329

Conread position: 128-527
Cow position: chrX:42461797-42462218 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 32

Conread position: 129-277
Cow position: chrX:3579892-3579737 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 129-282
Cow position: chrX:9425794-9425953 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 80, 150

Conread position: 129-291
Cow position: chrX:11633626-11633457 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 27, 150

Conread position: 129-291
Cow position: chrX:45015525-45015364 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 27, 82

Conread position: 129-293
Cow position: chrX:6488523-6488363 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 136
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 27, 76

Conread position: 129-293
Cow position: chrX:16541725-16541899 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 27, 155

Conread position: 129-300
Cow position: chrX:7721934-7721754 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 27, 15

Conread position: 129-304
Cow position: chrX:38549393-38549214 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 144
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 60, 28

Conread position: 129-306
Cow position: chrX:11589641-11589828 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 27, 154

Conread position: 129-306
Cow position: chrX:15815033-15814861 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 144
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 27, 34

Conread position: 129-307
Cow position: chrX:17662647-17662834 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 151
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 27, 34

Conread position: 129-307
Cow position: chrX:27772015-27772193 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 86, 120

Conread position: 129-307
Cow position: chrX:40116367-40116188 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 85, 143

Conread position: 129-310
Cow position: chrX:21672502-21672311 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 27, 0

Conread position: 129-310
Cow position: chrX:23514069-23514258 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 155
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 27, 31

Conread position: 129-310
Cow position: chrX:32420166-32419970 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 129-311
Cow position: chrX:1514460-1514645 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 27, 73

Conread position: 129-311
Cow position: chrX:30832901-30833079 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 27, 31

Conread position: 129-337
Cow position: chrX:32020173-32020389 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 173
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 27, 151

Conread position: 129-345
Cow position: chrX:7497186-7496974 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 92, 18

Conread position: 129-347
Cow position: chrX:35413566-35413353 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 59

Conread position: 129-350
Cow position: chrX:40647932-40647698 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 183
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 27, 31

Conread position: 129-351
Cow position: chrX:42874930-42874697 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 153

Conread position: 129-360
Cow position: chrX:4269115-4269357 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 182
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 27, 213

Conread position: 129-366
Cow position: chrX:33466556-33466321 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 27

Conread position: 129-367
Cow position: chrX:34454613-34454372 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 146

Conread position: 129-371
Cow position: chrX:17271343-17271590 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 186
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 95, 30

Conread position: 129-379
Cow position: chrX:37843669-37843411 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 129-386
Cow position: chrX:7351247-7350986 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 125

Conread position: 129-422
Cow position: chrX:34502868-34502559 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 152

Conread position: 129-423
Cow position: chrX:7718802-7718492 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 201

Conread position: 129-424
Cow position: chrX:11806067-11806383 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 225
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 92, 152

Conread position: 129-459
Cow position: chrX:15147241-15147582 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 116

Conread position: 129-463
Cow position: chrX:23583508-23583153 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 12

Conread position: 129-482
Cow position: chrX:14599479-14599112 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 150

Conread position: 129-499
Cow position: chrX:28134291-28133908 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 28

Conread position: 129-509
Cow position: chrX:38094575-38094976 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 117

Conread position: 129-515
Cow position: chrX:24287979-24288370 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 28

Conread position: 129-525
Cow position: chrX:4632903-4633324 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 150

Conread position: 129-527
Cow position: chrX:2559013-2559429 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 95

Conread position: 129-527
Cow position: chrX:4996546-4996146 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 28

Conread position: 129-527
Cow position: chrX:12249748-12249333 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 19

Conread position: 129-527
Cow position: chrX:15139599-15140017 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 140

Conread position: 129-527
Cow position: chrX:18462025-18462444 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 141

Conread position: 129-527
Cow position: chrX:21593234-21592818 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 199

Conread position: 129-527
Cow position: chrX:36249915-36250333 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 129-527
Cow position: chrX:39558404-39558835 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 31

Conread position: 130-270
Cow position: chrX:17908341-17908484 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 130-304
Cow position: chrX:2383434-2383255 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 26, 33

Conread position: 130-304
Cow position: chrX:4942809-4942985 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 85, 143

Conread position: 130-305
Cow position: chrX:22074745-22074565 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 73, 0

Conread position: 130-307
Cow position: chrX:4768688-4768513 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 27, 0

Conread position: 130-310
Cow position: chrX:25411786-25411600 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 26, 48

Conread position: 130-341
Cow position: chrX:27509078-27509292 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 170
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 34, 22

Conread position: 130-368
Cow position: chrX:7646201-7645960 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 130-468
Cow position: chrX:17888473-17888798 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 249
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 278, 21

Conread position: 130-503
Cow position: chrX:38936642-38936247 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 22

Conread position: 130-515
Cow position: chrX:8899975-8899568 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 303

Conread position: 130-527
Cow position: chrX:15007204-15007620 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 130-527
Cow position: chrX:24105573-24105159 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 149

Conread position: 130-527
Cow position: chrX:38227147-38227562 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 144

Conread position: 130-527
Cow position: chrX:40480923-40481339 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 144

Conread position: 130-527
Cow position: chrX:41878987-41879399 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 30

Conread position: 130-527
Cow position: chrX:45993168-45992777 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 272
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 49, 40

Conread position: 131-295
Cow position: chrX:4750360-4750523 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 88, 112

Conread position: 131-308
Cow position: chrX:42492569-42492748 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 148
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 25, 148

Conread position: 131-345
Cow position: chrX:47191461-47191670 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 21, 0

Conread position: 131-480
Cow position: chrX:39555887-39556237 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 21

Conread position: 131-482
Cow position: chrX:48371044-48370671 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 150

Conread position: 131-517
Cow position: chrX:45502095-45501685 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 14

Conread position: 131-525
Cow position: chrX:20582972-20582564 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 389

Conread position: 131-525
Cow position: chrX:32128036-32128461 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 148

Conread position: 131-527
Cow position: chrX:7695693-7695311 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 72

Conread position: 131-527
Cow position: chrX:40452265-40452689 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 369

Conread position: 132-396
Cow position: chrX:34270345-34270090 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 164
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 24, 138

Conread position: 132-527
Cow position: chrX:13177522-13177929 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 184

Conread position: 134-372
Cow position: chrX:36778353-36778103 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 146

Conread position: 134-525
Cow position: chrX:28866058-28866451 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 29

Conread position: 135-527
Cow position: chrX:34990975-34990591 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 138-526
Cow position: chrX:37489665-37489258 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 335

Conread position: 140-337
Cow position: chrX:19930588-19930389 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 81, 21

Conread position: 143-342
Cow position: chrX:488419-488218 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 76, 16

Conread position: 143-379
Cow position: chrX:44731530-44731291 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 48, 167

Conread position: 143-527
Cow position: chrX:45430084-45430492 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 135

Conread position: 144-477
Cow position: chrX:21064217-21063879 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 93

Conread position: 145-363
Cow position: chrX:25238107-25237885 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 133

Conread position: 146-527
Cow position: chrX:45043494-45043089 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 138

Conread position: 147-525
Cow position: chrX:18293858-18293472 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 279
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 42, 129

Conread position: 147-527
Cow position: chrX:20504684-20504293 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 48

Conread position: 147-527
Cow position: chrX:21319607-21319223 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 279
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 216, 48

Conread position: 148-527
Cow position: chrX:20976147-20976536 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 44

Conread position: 149-421
Cow position: chrX:25283224-25283503 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 124

Conread position: 152-495
Cow position: chrX:29925658-29925994 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 234
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 51, 17

Conread position: 153-485
Cow position: chrX:36840798-36840434 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 265
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 71, 129

Conread position: 161-454
Cow position: chrX:48248739-48248423 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 220
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 60, 0

Conread position: 162-310
Cow position: chrX:2029306-2029150 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 60, 119

Conread position: 162-346
Cow position: chrX:16531910-16531723 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 154
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 51, 115

Conread position: 162-360
Cow position: chrX:39346869-39347076 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 60, 120

Conread position: 162-372
Cow position: chrX:30919475-30919696 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 27, 111

Conread position: 162-372
Cow position: chrX:46771055-46771274 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 124

Conread position: 162-386
Cow position: chrX:38794642-38794409 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 33, 114

Conread position: 162-418
Cow position: chrX:7382236-7381964 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 115

Conread position: 162-447
Cow position: chrX:25419245-25419553 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 228
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 62, 119

Conread position: 162-461
Cow position: chrX:37377349-37377662 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 224
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 45, 120

Conread position: 162-480
Cow position: chrX:630393-630730 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 240
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 66, 117

Conread position: 162-503
Cow position: chrX:160120-160484 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 118

Conread position: 162-512
Cow position: chrX:35632839-35633208 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 158

Conread position: 162-525
Cow position: chrX:13068824-13069212 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 263
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 80, 115

Conread position: 162-527
Cow position: chrX:18989883-18990243 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 260
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 33, 118

Conread position: 162-527
Cow position: chrX:24827244-24826863 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 139

Conread position: 162-527
Cow position: chrX:27486323-27485934 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 278
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 47, 97

Conread position: 162-527
Cow position: chrX:30085350-30085721 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 247
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 96, 103

Conread position: 162-527
Cow position: chrX:34565196-34564831 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 47

Conread position: 163-299
Cow position: chrX:18812166-18812029 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 55, 105

Conread position: 163-310
Cow position: chrX:26875971-26876121 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 125
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 53, 103

Conread position: 163-339
Cow position: chrX:46989878-46990056 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 115, 46

Conread position: 163-356
Cow position: chrX:31294645-31294826 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 152
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 41, 0

Conread position: 163-372
Cow position: chrX:11313866-11314080 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 58, 117

Conread position: 163-381
Cow position: chrX:25617996-25618229 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 30, 117

Conread position: 163-482
Cow position: chrX:10916661-10916324 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 63

Conread position: 163-527
Cow position: chrX:25151102-25150718 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 256
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 47, 40

Conread position: 163-527
Cow position: chrX:29049876-29049508 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 95

Conread position: 163-527
Cow position: chrX:42086777-42086394 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 134

Conread position: 164-525
Cow position: chrX:4629774-4630167 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 276
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 60, 0

Conread position: 164-527
Cow position: chrX:9252264-9252640 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 152

Conread position: 168-527
Cow position: chrX:32870876-32871255 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 89

Conread position: 174-343
Cow position: chrX:5856422-5856596 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 35, 105

Conread position: 174-384
Cow position: chrX:45976778-45976555 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 172
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 98, 0

Conread position: 174-483
Cow position: chrX:43218291-43217964 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 98

Show alignments to all cow chromosomes.