Cow genome map


           Conread name:
           Thy1-THY010019C10
        

               Conread position:
               1-471
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 265
               

               Conread position:
               1-471
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 82
               

               Conread position:
               1-476
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 44
               

               Conread position:
               1-563
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 25
               

               Conread position:
               1-563
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 272
               

               Conread position:
               2-279
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               23, 191
               

               Conread position:
               2-471
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 327
               

               Conread position:
               2-589
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 331
               

               Conread position:
               5-471
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 159
               

               Conread position:
               5-471
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               5-481
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               329
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               20, 129
               

               Conread position:
               5-558
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 77
               

               Conread position:
               5-588
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 18
               

               Conread position:
               6-554
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 49
               

               Conread position:
               7-471
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 284
               

               Conread position:
               8-223
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               8-368
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               253
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               77, 32
               

               Conread position:
               8-376
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               91, 189
               

               Conread position:
               8-424
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               288
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               79, 64
               

               Conread position:
               8-471
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 278
               

               Conread position:
               8-471
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               314
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               101, 72
               

               Conread position:
               8-478
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 332
               

               Conread position:
               8-596
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 355
               

               Conread position:
               12-471
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 70
               

               Conread position:
               18-228
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               88, 168
               

               Conread position:
               18-256
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               92, 137
               

               Conread position:
               18-261
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               18-263
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               18-300
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               199
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               18-314
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               18-333
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               220
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               81, 306
               

               Conread position:
               18-348
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 23
               

               Conread position:
               18-364
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               18-379
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               253
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               69, 89
               

               Conread position:
               18-393
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 20
               

               Conread position:
               18-393
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 306
               

               Conread position:
               18-396
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               267
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               81, 22
               

               Conread position:
               18-459
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 160
               

               Conread position:
               18-464
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 45
               

               Conread position:
               18-465
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 113
               

               Conread position:
               18-465
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 298
               

               Conread position:
               18-465
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 115
               

               Conread position:
               18-465
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 246
               

               Conread position:
               18-465
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 333
               

               Conread position:
               18-465
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 213
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 306
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 49
               

               Conread position:
               18-483
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 228
               

               Conread position:
               18-484
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 306
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 22
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 175
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 249
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 138
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 367
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 573
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 47
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 576
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 64
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 54
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 303
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 247
               

               Conread position:
               18-565
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 212
               

               Conread position:
               18-565
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 68
               

               Conread position:
               18-587
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 311
               

               Conread position:
               18-588
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 22
               

               Conread position:
               18-589
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 595
               

               Conread position:
               18-589
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 54
               

               Conread position:
               18-596
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 317
               

               Conread position:
               18-598
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 309
               

               Conread position:
               18-613
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 311
               

               Conread position:
               19-471
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               19-471
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               19-563
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 248
               

               Conread position:
               23-465
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 304
               

               Conread position:
               23-549
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 201
               

               Conread position:
               65-489
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 159
               

               Conread position:
               100-554
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 68
               

               Conread position:
               109-552
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 85
               

               Conread position:
               109-558
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 219
               

               Conread position:
               109-562
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 120
               

               Conread position:
               109-563
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 176
               

               Conread position:
               117-591
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               312
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               137, 290
               

               Conread position:
               187-563
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               34, 14
               

               Conread position:
               187-563
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               34, 14
               

               Conread position:
               215-558
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               94, 27
               

               Conread position:
               328-554
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               65, 42
               
Show alignments to all cow chromosomes.