Cow genome map


           Conread name:
           Thy1-THY010019C10
        

               Conread position:
               1-465
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               305
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               25, 132
               

               Conread position:
               1-554
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 43
               

               Conread position:
               1-563
               

               Cow position:
               
               

               Alignm length:
               598
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 234
               

               Conread position:
               2-465
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 338
               

               Conread position:
               2-465
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 41
               

               Conread position:
               2-471
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               2-472
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               2-563
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 208
               

               Conread position:
               5-471
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               8-575
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 259
               

               Conread position:
               8-596
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 259
               

               Conread position:
               11-563
               

               Cow position:
               
               

               Alignm length:
               597
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 321
               

               Conread position:
               11-596
               

               Cow position:
               
               

               Alignm length:
               629
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 29
               

               Conread position:
               14-482
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 332
               

               Conread position:
               18-227
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               18-228
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               81, 150
               

               Conread position:
               18-234
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               18-237
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               82, 180
               

               Conread position:
               18-258
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               49, 55
               

               Conread position:
               18-267
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               87, 245
               

               Conread position:
               18-313
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               18-346
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               244
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               87, 303
               

               Conread position:
               18-411
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 305
               

               Conread position:
               18-465
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 305
               

               Conread position:
               18-465
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 230
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 364
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 305
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 339
               

               Conread position:
               18-483
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 127
               

               Conread position:
               18-554
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 187
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 304
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 242
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 180
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 19
               

               Conread position:
               18-574
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 212
               

               Conread position:
               18-582
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 305
               

               Conread position:
               18-588
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 306
               

               Conread position:
               18-590
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 315
               

               Conread position:
               18-590
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 129
               

               Conread position:
               18-590
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 22
               

               Conread position:
               19-261
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               22, 29
               

               Conread position:
               19-471
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 60
               

               Conread position:
               19-563
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 374
               

               Conread position:
               32-471
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 146
               

               Conread position:
               44-471
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 156
               

               Conread position:
               184-559
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 90
               

               Conread position:
               277-554
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               119, 43
               

               Conread position:
               345-568
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               117, 43
               
Show alignments to all cow chromosomes.