Cow genome map
| Conread name: | Thy1-THY010019C10 |
| Conread position: | 1-465 |
| Cow position: | chr10:40461906-40462366 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 305 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 25, 132 |
| Conread position: | 1-554 |
| Cow position: | chr10:8326483-8325938 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 43 |
| Conread position: | 1-563 |
| Cow position: | chr10:24311541-24310946 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 234 |
| Conread position: | 2-465 |
| Cow position: | chr10:22102065-22102538 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 338 |
| Conread position: | 2-465 |
| Cow position: | chr10:39040478-39039994 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 41 |
| Conread position: | 2-471 |
| Cow position: | chr10:14335022-14334538 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 2-472 |
| Cow position: | chr10:16926361-16926841 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 2-563 |
| Cow position: | chr10:32701557-32702149 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 208 |
| Conread position: | 5-471 |
| Cow position: | chr10:1665703-1665224 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 8-575 |
| Cow position: | chr10:279771-279196 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 259 |
| Conread position: | 8-596 |
| Cow position: | chr10:41567936-41568560 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 259 |
| Conread position: | 11-563 |
| Cow position: | chr10:14804674-14805268 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 321 |
| Conread position: | 11-596 |
| Cow position: | chr10:44708776-44708152 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 29 |
| Conread position: | 14-482 |
| Cow position: | chr10:29110298-29109825 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 332 |
| Conread position: | 18-227 |
| Cow position: | chr10:62407997-62407779 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 18-228 |
| Cow position: | chr10:21731001-21730782 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 81, 150 |
| Conread position: | 18-234 |
| Cow position: | chr10:39815692-39815464 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 18-237 |
| Cow position: | chr10:4190966-4190739 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 82, 180 |
| Conread position: | 18-258 |
| Cow position: | chr10:41634479-41634710 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 55 |
| Conread position: | 18-267 |
| Cow position: | chr10:125239-125496 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 87, 245 |
| Conread position: | 18-313 |
| Cow position: | chr10:47083922-47083618 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 18-346 |
| Cow position: | chr10:8290825-8291162 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 244 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 87, 303 |
| Conread position: | 18-411 |
| Cow position: | chr10:34286104-34286508 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 305 |
| Conread position: | 18-465 |
| Cow position: | chr10:28642380-28642838 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 305 |
| Conread position: | 18-465 |
| Cow position: | chr10:29845801-29845344 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 230 |
| Conread position: | 18-471 |
| Cow position: | chr10:21739903-21739440 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 364 |
| Conread position: | 18-471 |
| Cow position: | chr10:27664418-27663959 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 305 |
| Conread position: | 18-471 |
| Cow position: | chr10:38537650-38537189 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 339 |
| Conread position: | 18-483 |
| Cow position: | chr10:41158288-41158765 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 127 |
| Conread position: | 18-554 |
| Cow position: | chr10:39779274-39778707 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 187 |
| Conread position: | 18-563 |
| Cow position: | chr10:1378353-1378922 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 304 |
| Conread position: | 18-563 |
| Cow position: | chr10:7281241-7280683 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 242 |
| Conread position: | 18-563 |
| Cow position: | chr10:39180636-39181218 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 180 |
| Conread position: | 18-563 |
| Cow position: | chr10:57989143-57988572 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 19 |
| Conread position: | 18-574 |
| Cow position: | chr10:30684666-30684059 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 212 |
| Conread position: | 18-582 |
| Cow position: | chr10:47907777-47908375 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 305 |
| Conread position: | 18-588 |
| Cow position: | chr10:19495433-19494842 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 306 |
| Conread position: | 18-590 |
| Cow position: | chr10:11684799-11684180 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 315 |
| Conread position: | 18-590 |
| Cow position: | chr10:19840527-19841131 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 129 |
| Conread position: | 18-590 |
| Cow position: | chr10:21399824-21399231 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 22 |
| Conread position: | 19-261 |
| Cow position: | chr10:21487769-21488016 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 22, 29 |
| Conread position: | 19-471 |
| Cow position: | chr10:42749683-42750126 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 60 |
| Conread position: | 19-563 |
| Cow position: | chr10:38344512-38343935 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 374 |
| Conread position: | 32-471 |
| Cow position: | chr10:19544517-19544079 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 146 |
| Conread position: | 44-471 |
| Cow position: | chr10:42111298-42111727 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 156 |
| Conread position: | 184-559 |
| Cow position: | chr10:36469428-36469040 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 90 |
| Conread position: | 277-554 |
| Cow position: | chr10:53486092-53485813 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 119, 43 |
| Conread position: | 345-568 |
| Cow position: | chr10:64221220-64220998 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 117, 43 |
Show alignments to all cow chromosomes.