Cow genome map


           Conread name:
           Thy1-THY010019C10
        

               Conread position:
               1-256
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               1-471
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               1-554
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 72
               

               Conread position:
               1-563
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 403
               

               Conread position:
               1-588
               

               Cow position:
               
               

               Alignm length:
               627
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 72
               

               Conread position:
               2-307
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               2-490
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 455
               

               Conread position:
               2-558
               

               Cow position:
               
               

               Alignm length:
               597
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 167
               

               Conread position:
               3-471
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 301
               

               Conread position:
               5-374
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 14
               

               Conread position:
               5-576
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 36
               

               Conread position:
               8-216
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               18, 30
               

               Conread position:
               8-563
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 172
               

               Conread position:
               11-188
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               99, 29
               

               Conread position:
               18-254
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               85, 55
               

               Conread position:
               18-393
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 162
               

               Conread position:
               18-393
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               18-399
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 50
               

               Conread position:
               18-460
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 245
               

               Conread position:
               18-464
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               299
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               86, 245
               

               Conread position:
               18-464
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               18-465
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 318
               

               Conread position:
               18-465
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 185
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 308
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 167
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 306
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 246
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 305
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 156
               

               Conread position:
               18-476
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 284
               

               Conread position:
               18-554
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 444
               

               Conread position:
               18-565
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 19
               

               Conread position:
               18-565
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 249
               

               Conread position:
               18-590
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 280
               

               Conread position:
               18-591
               

               Cow position:
               
               

               Alignm length:
               597
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 353
               

               Conread position:
               19-389
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 137
               

               Conread position:
               19-471
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 121
               

               Conread position:
               19-557
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 170
               

               Conread position:
               20-465
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 304
               

               Conread position:
               23-563
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 257
               

               Conread position:
               32-307
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               79, 130
               

               Conread position:
               45-565
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               351
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               60, 185
               

               Conread position:
               83-554
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 96
               

               Conread position:
               117-466
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               250
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               159, 137
               

               Conread position:
               161-554
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               271
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               92, 8
               

               Conread position:
               210-556
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 102
               

               Conread position:
               388-554
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               87, 0
               
Show alignments to all cow chromosomes.