Cow genome map

Conread name: Thy1-THY010019C10

Conread position: 1-256
Cow position: chr14:45189372-45189103 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 24, 0

Conread position: 1-471
Cow position: chr14:33402098-33402582 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 0

Conread position: 1-554
Cow position: chr14:38229181-38228658 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 72

Conread position: 1-563
Cow position: chr14:16272890-16272291 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 403

Conread position: 1-588
Cow position: chr14:38147408-38148028 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 72

Conread position: 2-307
Cow position: chr14:29775808-29775489 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 2-490
Cow position: chr14:11561620-11561114 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 455

Conread position: 2-558
Cow position: chr14:50138972-50139565 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 167

Conread position: 3-471
Cow position: chr14:35365846-35365378 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 301

Conread position: 5-374
Cow position: chr14:23257769-23258150 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 14

Conread position: 5-576
Cow position: chr14:46392118-46391517 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 36

Conread position: 8-216
Cow position: chr14:16343732-16343514 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 30

Conread position: 8-563
Cow position: chr14:45028585-45028001 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 172

Conread position: 11-188
Cow position: chr14:45161516-45161697 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 99, 29

Conread position: 18-254
Cow position: chr14:46465750-46465992 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 170
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 85, 55

Conread position: 18-393
Cow position: chr14:15275801-15275420 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 162

Conread position: 18-393
Cow position: chr14:17685826-17686212 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 18-399
Cow position: chr14:190394-190786 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 50

Conread position: 18-460
Cow position: chr14:44378229-44378678 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 245

Conread position: 18-464
Cow position: chr14:44226826-44227259 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 299
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 86, 245

Conread position: 18-464
Cow position: chr14:45081477-45081938 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 18-465
Cow position: chr14:20782889-20783340 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 318

Conread position: 18-465
Cow position: chr14:30584529-30584067 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 185

Conread position: 18-471
Cow position: chr14:2284765-2285219 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 308

Conread position: 18-471
Cow position: chr14:5074395-5074846 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 167

Conread position: 18-471
Cow position: chr14:9046002-9046468 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 306

Conread position: 18-471
Cow position: chr14:22031013-22030554 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 18-471
Cow position: chr14:32447223-32447682 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 246

Conread position: 18-471
Cow position: chr14:33393360-33392907 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 305

Conread position: 18-471
Cow position: chr14:37224618-37225082 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 18-471
Cow position: chr14:40169286-40168841 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 156

Conread position: 18-476
Cow position: chr14:17760451-17759984 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 284

Conread position: 18-554
Cow position: chr14:2294701-2295269 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 444

Conread position: 18-565
Cow position: chr14:19327841-19327255 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 19

Conread position: 18-565
Cow position: chr14:48253884-48253306 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 249

Conread position: 18-590
Cow position: chr14:17491032-17490423 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 280

Conread position: 18-591
Cow position: chr14:5529495-5530078 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 353

Conread position: 19-389
Cow position: chr14:33237455-33237829 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 137

Conread position: 19-471
Cow position: chr14:45671619-45671156 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 121

Conread position: 19-557
Cow position: chr14:9100291-9099736 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 20-465
Cow position: chr14:750994-751450 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 304

Conread position: 23-563
Cow position: chr14:16919282-16918713 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 257

Conread position: 32-307
Cow position: chr14:30735422-30735699 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 193
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 79, 130

Conread position: 45-565
Cow position: chr14:44552340-44552852 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 351
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 60, 185

Conread position: 83-554
Cow position: chr14:35424585-35425067 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 96

Conread position: 117-466
Cow position: chr14:41409455-41409817 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 250
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 159, 137

Conread position: 161-554
Cow position: chr14:24997003-24996600 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 271
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 92, 8

Conread position: 210-556
Cow position: chr14:39722315-39721966 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 102

Conread position: 388-554
Cow position: chr14:37455105-37454932 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 87, 0

Show alignments to all cow chromosomes.