Cow genome map
| Conread name: | Thy1-THY010019C10 |
| Conread position: | 1-261 |
| Cow position: | chr15:8057705-8057968 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 24, 165 |
| Conread position: | 1-552 |
| Cow position: | chr15:6079160-6079743 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 135 |
| Conread position: | 1-563 |
| Cow position: | chr15:11626101-11626667 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 69 |
| Conread position: | 5-207 |
| Cow position: | chr15:1300392-1300180 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 20, 203 |
| Conread position: | 5-471 |
| Cow position: | chr15:51675133-51675609 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 35 |
| Conread position: | 5-483 |
| Cow position: | chr15:4962050-4962543 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 52 |
| Conread position: | 5-556 |
| Cow position: | chr15:53313183-53313723 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 48 |
| Conread position: | 8-471 |
| Cow position: | chr15:4142399-4141925 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 310 |
| Conread position: | 8-471 |
| Cow position: | chr15:50123523-50123041 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 8-478 |
| Cow position: | chr15:2016988-2017463 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 192 |
| Conread position: | 8-500 |
| Cow position: | chr15:3889298-3889810 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 483 |
| Conread position: | 8-582 |
| Cow position: | chr15:1782642-1783240 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 329 |
| Conread position: | 8-585 |
| Cow position: | chr15:4813019-4813626 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 86 |
| Conread position: | 8-596 |
| Cow position: | chr15:50147486-50148120 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 406 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 98, 288 |
| Conread position: | 12-563 |
| Cow position: | chr15:18577134-18577720 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 28 |
| Conread position: | 18-223 |
| Cow position: | chr15:4686027-4686240 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 94, 192 |
| Conread position: | 18-268 |
| Cow position: | chr15:32493955-32493699 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 18-294 |
| Cow position: | chr15:53136791-53136506 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 18-346 |
| Cow position: | chr15:17079776-17079432 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 82, 175 |
| Conread position: | 18-393 |
| Cow position: | chr15:44070357-44070743 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 218 |
| Conread position: | 18-455 |
| Cow position: | chr15:9738942-9738511 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 94 |
| Conread position: | 18-463 |
| Cow position: | chr15:35752889-35752434 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 61 |
| Conread position: | 18-464 |
| Cow position: | chr15:8811595-8811138 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 175 |
| Conread position: | 18-465 |
| Cow position: | chr15:24295527-24295972 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 292 |
| Conread position: | 18-465 |
| Cow position: | chr15:51218033-51218485 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 262 |
| Conread position: | 18-471 |
| Cow position: | chr15:1772927-1773391 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 5 |
| Conread position: | 18-471 |
| Cow position: | chr15:3009424-3008950 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 236 |
| Conread position: | 18-471 |
| Cow position: | chr15:3260889-3260429 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 249 |
| Conread position: | 18-471 |
| Cow position: | chr15:4671863-4672330 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 381 |
| Conread position: | 18-471 |
| Cow position: | chr15:7837678-7838154 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 325 |
| Conread position: | 18-558 |
| Cow position: | chr15:8099900-8100472 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 50 |
| Conread position: | 18-563 |
| Cow position: | chr15:6553392-6552813 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 162 |
| Conread position: | 18-563 |
| Cow position: | chr15:19737620-19737053 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 249 |
| Conread position: | 18-572 |
| Cow position: | chr15:18332397-18331816 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 45 |
| Conread position: | 18-590 |
| Cow position: | chr15:11597578-11596980 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 180 |
| Conread position: | 18-607 |
| Cow position: | chr15:17148557-17149155 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 200 |
| Conread position: | 19-471 |
| Cow position: | chr15:4196892-4197355 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 304 |
| Conread position: | 19-563 |
| Cow position: | chr15:4386190-4386758 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 331 |
| Conread position: | 42-463 |
| Cow position: | chr15:31784339-31783916 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 287 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 68, 210 |
| Conread position: | 43-471 |
| Cow position: | chr15:22378358-22378797 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 280 |
| Conread position: | 45-558 |
| Cow position: | chr15:2077114-2077637 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 348 |
| Conread position: | 47-418 |
| Cow position: | chr15:13391610-13391226 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 181 |
| Conread position: | 54-547 |
| Cow position: | chr15:4822944-4823447 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 138 |
| Conread position: | 68-297 |
| Cow position: | chr15:20356442-20356203 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 110-563 |
| Cow position: | chr15:35736319-35736792 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 96 |
| Conread position: | 117-482 |
| Cow position: | chr15:51610888-51611248 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 138 |
Show alignments to all cow chromosomes.