Cow genome map


           Conread name:
           Thy1-THY010019C10
        

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               24, 209
               

               Conread position:
               1-534
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 110
               

               Conread position:
               1-554
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               1-563
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 223
               

               Conread position:
               1-565
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 230
               

               Conread position:
               2-565
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               2-567
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               387
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               23, 442
               

               Conread position:
               5-465
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               320
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               20, 146
               

               Conread position:
               6-223
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               106, 9
               

               Conread position:
               8-471
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 326
               

               Conread position:
               8-596
               

               Cow position:
               
               

               Alignm length:
               635
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 128
               

               Conread position:
               11-346
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               208, 95
               

               Conread position:
               17-471
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 378
               

               Conread position:
               18-223
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               18-280
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               81, 112
               

               Conread position:
               18-297
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               203
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               95, 126
               

               Conread position:
               18-426
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 249
               

               Conread position:
               18-465
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 196
               

               Conread position:
               18-465
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               18-465
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 313
               

               Conread position:
               18-465
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 170
               

               Conread position:
               18-465
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               18-469
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 183
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 378
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 246
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 150
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 305
               

               Conread position:
               18-554
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 249
               

               Conread position:
               18-558
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 401
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 347
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 268
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 378
               

               Conread position:
               18-567
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               18-568
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 306
               

               Conread position:
               19-477
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 21
               

               Conread position:
               20-563
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 17
               

               Conread position:
               23-478
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 201
               

               Conread position:
               273-554
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               64, 98
               

               Conread position:
               276-567
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               63, 98
               

               Conread position:
               282-554
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               220
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               295-572
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               40, 270
               
Show alignments to all cow chromosomes.