Cow genome map
| Conread name: | Thy1-THY010019C10 |
| Conread position: | 1-269 |
| Cow position: | chr17:11025875-11025598 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 5-471 |
| Cow position: | chr17:11783486-11783974 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 330 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 21, 132 |
| Conread position: | 7-309 |
| Cow position: | chr17:38874272-38874589 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 227 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 8-270 |
| Cow position: | chr17:15156321-15156052 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 91, 182 |
| Conread position: | 8-469 |
| Cow position: | chr17:20087102-20086648 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 186 |
| Conread position: | 8-471 |
| Cow position: | chr17:14216385-14215907 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 188 |
| Conread position: | 8-471 |
| Cow position: | chr17:15142710-15142235 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 231 |
| Conread position: | 8-563 |
| Cow position: | chr17:24782806-24783396 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 261 |
| Conread position: | 8-596 |
| Cow position: | chr17:6120360-6120981 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 9-582 |
| Cow position: | chr17:43989146-43989757 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 316 |
| Conread position: | 10-575 |
| Cow position: | chr17:250809-251384 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 191 |
| Conread position: | 11-252 |
| Cow position: | chr17:227661-227412 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 91, 213 |
| Conread position: | 12-471 |
| Cow position: | chr17:20099825-20099347 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 316 |
| Conread position: | 12-567 |
| Cow position: | chr17:14040385-14039804 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 210 |
| Conread position: | 18-213 |
| Cow position: | chr17:18103029-18102829 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 92, 189 |
| Conread position: | 18-337 |
| Cow position: | chr17:3642174-3641848 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 18-464 |
| Cow position: | chr17:19268171-19267713 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 18-465 |
| Cow position: | chr17:11087064-11086612 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 30 |
| Conread position: | 18-465 |
| Cow position: | chr17:31767383-31766923 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 305 |
| Conread position: | 18-465 |
| Cow position: | chr17:40805467-40805922 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 375 |
| Conread position: | 18-471 |
| Cow position: | chr17:2262762-2263228 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 293 |
| Conread position: | 18-471 |
| Cow position: | chr17:14894819-14895293 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 314 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 92, 160 |
| Conread position: | 18-471 |
| Cow position: | chr17:15436450-15436902 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 304 |
| Conread position: | 18-554 |
| Cow position: | chr17:4942071-4941501 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 33 |
| Conread position: | 18-558 |
| Cow position: | chr17:16856860-16856287 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 206 |
| Conread position: | 18-563 |
| Cow position: | chr17:6069212-6069784 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 285 |
| Conread position: | 18-563 |
| Cow position: | chr17:6260515-6261095 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 574 |
| Conread position: | 18-563 |
| Cow position: | chr17:23323795-23323217 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 225 |
| Conread position: | 18-563 |
| Cow position: | chr17:24029346-24028765 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 575 |
| Conread position: | 19-208 |
| Cow position: | chr17:14307191-14306997 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 58, 145 |
| Conread position: | 19-482 |
| Cow position: | chr17:31532885-31533341 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 34 |
| Conread position: | 19-483 |
| Cow position: | chr17:34156777-34157255 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 249 |
| Conread position: | 20-465 |
| Cow position: | chr17:15851352-15851803 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 221 |
| Conread position: | 34-465 |
| Cow position: | chr17:1880772-1881216 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 134 |
| Conread position: | 34-471 |
| Cow position: | chr17:1704018-1703575 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 277 |
| Conread position: | 327-554 |
| Cow position: | chr17:4675090-4675332 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 16, 130 |
Show alignments to all cow chromosomes.