Cow genome map

Conread name: Thy1-THY010019C10

Conread position: 1-367
Cow position:
Alignm length: 383
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 201

Conread position: 1-469
Cow position:
Alignm length: 491
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 151

Conread position: 1-471
Cow position:
Alignm length: 488
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 82

Conread position: 2-314
Cow position:
Alignm length: 326
Alignm identity: 228
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 23, 317

Conread position: 2-465
Cow position:
Alignm length: 477
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 328

Conread position: 2-477
Cow position:
Alignm length: 485
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 123

Conread position: 2-554
Cow position:
Alignm length: 568
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 29

Conread position: 2-563
Cow position:
Alignm length: 598
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 382

Conread position: 2-563
Cow position:
Alignm length: 600
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 303

Conread position: 5-471
Cow position:
Alignm length: 482
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 26

Conread position: 5-554
Cow position:
Alignm length: 585
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 97

Conread position: 8-422
Cow position:
Alignm length: 432
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 49

Conread position: 8-440
Cow position:
Alignm length: 445
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 113

Conread position: 8-471
Cow position:
Alignm length: 475
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 318

Conread position: 8-549
Cow position:
Alignm length: 564
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 40

Conread position: 8-563
Cow position:
Alignm length: 592
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 185

Conread position: 8-566
Cow position:
Alignm length: 601
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 256

Conread position: 8-596
Cow position:
Alignm length: 604
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 191

Conread position: 12-551
Cow position:
Alignm length: 578
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 21

Conread position: 12-563
Cow position:
Alignm length: 580
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 100

Conread position: 12-563
Cow position:
Alignm length: 586
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 286

Conread position: 16-406
Cow position:
Alignm length: 395
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 164

Conread position: 18-204
Cow position:
Alignm length: 194
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 87, 184

Conread position: 18-234
Cow position:
Alignm length: 228
Alignm identity: 156
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 88, 187

Conread position: 18-250
Cow position:
Alignm length: 242
Alignm identity: 171
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 87, 23

Conread position: 18-255
Cow position:
Alignm length: 247
Alignm identity: 168
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 18-295
Cow position:
Alignm length: 280
Alignm identity: 191
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 86, 19

Conread position: 18-299
Cow position:
Alignm length: 296
Alignm identity: 212
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 89, 206

Conread position: 18-305
Cow position:
Alignm length: 299
Alignm identity: 197
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 18-353
Cow position:
Alignm length: 344
Alignm identity: 233
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 89, 28

Conread position: 18-464
Cow position:
Alignm length: 456
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 18-465
Cow position:
Alignm length: 460
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 305

Conread position: 18-465
Cow position:
Alignm length: 467
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 18-465
Cow position:
Alignm length: 460
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 308

Conread position: 18-466
Cow position:
Alignm length: 465
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 312

Conread position: 18-471
Cow position:
Alignm length: 467
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 164

Conread position: 18-471
Cow position:
Alignm length: 467
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 347

Conread position: 18-471
Cow position:
Alignm length: 468
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 250

Conread position: 18-471
Cow position:
Alignm length: 465
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 207

Conread position: 18-471
Cow position:
Alignm length: 466
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 206

Conread position: 18-471
Cow position:
Alignm length: 468
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 245

Conread position: 18-471
Cow position:
Alignm length: 466
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 305

Conread position: 18-471
Cow position:
Alignm length: 469
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 308

Conread position: 18-558
Cow position:
Alignm length: 582
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 18-563
Cow position:
Alignm length: 583
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 575

Conread position: 18-567
Cow position:
Alignm length: 585
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 213

Conread position: 18-589
Cow position:
Alignm length: 594
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 364

Conread position: 19-463
Cow position:
Alignm length: 461
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 277

Conread position: 19-553
Cow position:
Alignm length: 553
Alignm identity: 358
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 91, 21

Conread position: 19-563
Cow position:
Alignm length: 583
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 575

Conread position: 20-425
Cow position:
Alignm length: 437
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 20-465
Cow position:
Alignm length: 463
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 129

Conread position: 21-471
Cow position:
Alignm length: 465
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 19

Conread position: 23-484
Cow position:
Alignm length: 471
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 175

Conread position: 23-567
Cow position:
Alignm length: 563
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 61

Conread position: 26-310
Cow position:
Alignm length: 295
Alignm identity: 199
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 82, 187

Conread position: 34-319
Cow position:
Alignm length: 300
Alignm identity: 211
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 78, 53

Conread position: 36-471
Cow position:
Alignm length: 450
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 39

Conread position: 45-471
Cow position:
Alignm length: 441
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 179

Conread position: 56-464
Cow position:
Alignm length: 421
Alignm identity: 272
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 55, 76

Conread position: 58-471
Cow position:
Alignm length: 420
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 206

Conread position: 109-463
Cow position:
Alignm length: 359
Alignm identity: 245
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 226, 67

Conread position: 109-557
Cow position:
Alignm length: 457
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 39

Conread position: 110-554
Cow position:
Alignm length: 458
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 22

Conread position: 157-556
Cow position:
Alignm length: 418
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 13

Conread position: 162-548
Cow position:
Alignm length: 408
Alignm identity: 279
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 163, 24

Show alignments to all cow chromosomes.